TCONS_00068125-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068125-protein
Unique NameTCONS_00068125-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length541

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068125-protein ID=TCONS_00068125-protein|Name=TCONS_00068125-protein|organism=Clytia hemisphaerica|type=polypeptide|length=541bp
MNLLIFVLVINYLFHGSKAASDDDCILSEWGDWGPCSKNCSTGGTKTRSK
TIIQMNGFFGDPCSTKTMKESTECGIENNGCEQLCDPQTGHCHCRKGMMP
DEANLKSCVDINECNANFGRGDCAQKCENIKEGYKCSCYPNFYLASDEKN
CNFNTSAEKCDFAIREYSDTFECVCKDKELVGLKCNKNKDQCSNVKCMSD
SVCLLYNHPGVNCFAIKDMIPILHPIKYSTYNIGNYRYIVELYMTRILEK
IAPKSPLFGGNYDTNDIHSSDTSKFYYVEGSQPRQVKSFTYVLYAVFNIE
NSLTSANPQEICSKLSGTDVHCLTQRECNILKSEGFSCPHVYTSTFGKQE
SNDSSKSNVIVIVVCLVVLLALIAIAICFVRRRGKWRNLRMMFHRDTEEV
RQVNDTLLRQESQNEPPPPYTAQDSNLAHIEQFDRSVFKDEPLNKRVEEP
VYESVTNLTGLPKYEDEYESMSSVKKGDKVDLPDEEDEGAARYVAVPCPT
IAPSSGEAAGQSSSSATEVEPHYVAPTNNKPLLYDDDDVKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042526XLOC_042526Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068125TCONS_00068125Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR001881EGF-like_Ca-bd_dom
IPR000884TSP1_rpt
IPR0110426-blade_b-propeller_TolB-like
IPR018097EGF_Ca-bd_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 113..152
e-value: 0.58
score: 19.2
coord: 73..109
e-value: 16.0
score: 13.6
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 110..152
e-value: 9.7E-5
score: 31.8
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 27..82
e-value: 1.7E-5
score: 34.3
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 24..82
score: 9.968
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 24..74
NoneNo IPR availableGENE3D1.20.5.510coord: 340..385
e-value: 1.2E-6
score: 27.7
NoneNo IPR availableGENE3D2.10.25.10coord: 112..153
e-value: 1.4E-8
score: 34.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 500..541
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..488
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 108..152
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 37..111
e-value: 4.0E-6
score: 25.7
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 110..136

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068125-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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