TCONS_00068166-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068166-protein
Unique NameTCONS_00068166-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length640

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068166-protein ID=TCONS_00068166-protein|Name=TCONS_00068166-protein|organism=Clytia hemisphaerica|type=polypeptide|length=640bp
MDVEHNDSNQNVMMNGDQENHLTNGHSIEDSAFADEPLLNGHHGDATTNL
STSPSKQKVIDTISEVINDRLLEDNSATSSMLLTDEKEKPDQDVASTMQN
ILGKVESTQNSATISPSQANTESPTETLSPISSTNQSLTPLSDTFDSPSE
KTDVSSPSNHVETVSQNNECHDKTISKDAMSGVVEKDESPLPEEPVSSPN
DYSGENHLNINETELDSETLVIESDSVQTSKESSTPEETLDSVKQDIVMP
EPTEPNDPKENIQESKNEINEIENAPIPKENTESTTESLISTESDVPTNA
TGTDESNEKEAKKPAEELDMLGNGLLKKKILKEGLGRESRPQQGDLLNIR
CEGKLADGTVVDKHSHLQLVLGDADVIQAMDMCVALMEDKETCTLYTDAR
YAYGLFGRLDYKPAIPKNASITYEIEILSIERGVPLQELSPQECSLRADK
KRGRGNDLYSRGDYAGAIDVYKRALKYLEGRTDKELLDMKVKCLNNLSAA
QLKVKAYIMALQSLDIVLELEPKNVKALFRKGKCLEHLGKENAAFECMKK
AAALDPENKLITQDLGRLQKRVAVTQQKEKQIYQRMFQQNTKQQTETEEG
GDEGGEGMEEEEEEDYFPLIGSLLVAAAACVGGLLWYRYR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042546XLOC_042546Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068166TCONS_00068166Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR001179PPIase_FKBP_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 525..558
e-value: 0.0061
score: 25.8
coord: 491..524
e-value: 5.4
score: 16.0
coord: 448..481
e-value: 7.4
score: 15.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 448..481
score: 7.228
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 525..558
score: 8.998
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 491..524
score: 6.874
NoneNo IPR availableGENE3D3.10.50.40coord: 251..434
e-value: 1.1E-21
score: 76.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 586..612
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..319
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 320..434
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 436..589
e-value: 5.9E-26
score: 90.4
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 450..588
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 340..428
e-value: 7.9E-12
score: 45.3
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 344..431
score: 15.993
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 448..558
score: 16.166

Blast
[Close]
BLAST of TCONS_00068166-protein vs. Swiss-Prot (Human)
Match: FKBP8 (Peptidyl-prolyl cis-trans isomerase FKBP8 OS=Homo sapiens GN=FKBP8 PE=1 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 2.814e-54
Identity = 110/278 (39.57%), Postives = 161/278 (57.91%), Query Frame = 0 
Query:  318 LDMLGNGLLKKKILKEGLGRESRPQQGDLLNIRCEGKLADGTVVDKHSHLQLVLGDADVIQAMDMCVALMEDKETCTLYTDARYAYGLFGRLDYKPAIPKNASITYEIEILSIERGVPLQELSPQECSLRADKKRGRGNDLYSRGDYAGAIDVYKRALKYLEGRT--------DKELLDMKVKCLNNLSAAQLKVKAYIMALQSLDIVLELEPKNVKALFRKGKCLEHLGKENAAFECMKKAAALDPENKLITQDLGRLQKRVAVTQQKEKQIYQRMF 587
            LD+LGNGLL+KK L  G    SRP +G ++ +  +  L +GT V +   L   LGD DVIQA+D+ V LM+  ET  +  D++Y YG  GR    P IP +A++  E+ + +   G  L+ L+ QE    A++KR  GN  Y R D+  A + Y  A+K +            + +LL +KVKCLNNL+A+QLK+  Y  AL+S  +VLE +P N+KALFRKGK L   G+ + A   ++ A  L+P NK I  +L +L K+ A  +  E  +Y++M 
Sbjct:   94 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGR---SPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRSTETALYRKML 368
The following BLAST results are available for this feature:
BLAST of TCONS_00068166-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FKBP82.814e-5439.57Peptidyl-prolyl cis-trans isomerase FKBP8 OS=Homo ... [more]
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