TCONS_00068692-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00068692-protein
Unique Name	TCONS_00068692-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	521

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00068692-protein ID=TCONS_00068692-protein|Name=TCONS_00068692-protein|organism=Clytia hemisphaerica|type=polypeptide|length=521bp
MATSRSRLGENSSANSSLLAPKTYGSYFRPENDQQAGKMTQIKSIWKKHK
LLICIFLAVVIGILVGLLSNVSVQELDQPVQANVLLFVGFPGEIFTRMLK
MLVLPLIITSLIIGFADLDHESSKKIGRRALLYYSFTTCMAVVLGLILVY
SISPGKYGNEKQFKDDVDQTRIMDTILDLIRNMFPENIVQACLETAVTRA
KEVPKHTAYNSTRNDTITNKTVLISGETTYESGTNILGIVVFSIVIGVLL
GKMGSQAQTFIECTRIFNDLTMKLVEYAMWYSPIGILSLVINKFASMKDT
SGEFQRLGCYLGTVISGLALHSLIVLPLAYFVMTRRNPFTFIKGTFKALL
TAFATSSSSATLPVTFKCLEDNNGLDNRVTRTVLPIGATINMDGSALYEA
VAAIFMAQSIGMTLDIGEYATISCVSILASIGAAGIPQGDLVTLFVVLQA
VGLPEEAITLILSVDWFLDRIRTSVNVLGDCIGAGIVAHRSEGDLPQIHA
PLEAFENSYHHELDDQEDEVV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042851	XLOC_042851	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00068692	TCONS_00068692	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001991	Na-dicarboxylate_symporter

Vocabulary: **Molecular Function**
Term	Definition
GO:0015293	symporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015293	symporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001991	Sodium:dicarboxylate symporter	PRINTS	PR00173	EDTRNSPORT	coord: 49..69 score: 30.76 coord: 382..408 score: 79.08 coord: 231..253 score: 47.47 coord: 98..118 score: 60.49 coord: 444..464 score: 49.42 coord: 278..297 score: 45.27 coord: 417..436 score: 51.35 coord: 315..334 score: 55.0 coord: 127..152 score: 49.38
IPR001991	Sodium:dicarboxylate symporter	GENE3D	1.10.3860.10		coord: 40..494 e-value: 3.4E-155 score: 516.3
IPR001991	Sodium:dicarboxylate symporter	PFAM	PF00375	SDF	coord: 51..489 e-value: 8.4E-131 score: 436.5
IPR001991	Sodium:dicarboxylate symporter	SUPERFAMILY	118215	Proton glutamate symport protein	coord: 232..489 coord: 51..192

Blast

[Close]

BLAST of TCONS_00068692-protein vs. Swiss-Prot (Human)
Match: EAA2 (Excitatory amino acid transporter 2 OS=Homo sapiens GN=SLC1A2 PE=1 SV=2)

HSP 1 Score: 415.231 bits (1066), Expect = 7.501e-140
Identity = 225/476 (47.27%), Postives = 311/476 (65.34%), Query Frame = 0

Query:   48 KHKLLICIFLAVVIGILVGLLSNVSVQELDQPVQANVLLFVGFPGEIFTRMLKMLVLPLIITSLIIGFADLDHESSKKIGRRALLYYSFTTCMAVVLGLILVYSISPGKYGNEKQFK--DDVDQTRIMDTILDLIRNMFPENIVQACLETAVTRAKEV----PKHTAYNSTR------NDTITN----KTVLISGETTYESGTNILGIVVFSIVIGVLLGKMGSQAQTFIECTRIFNDLTMKLVEYAMWYSPIGILSLVINKFASMKDTSGEFQRLGCYLGTVISGLALHSLIVLPLAYFVMTRRNPFTFIKGTFKALLTAFATSSSSATLPVTFKCLEDNNGLDNRVTRTVLPIGATINMDGSALYEAVAAIFMAQSIGMTLDIGEYATISCVSILASIGAAGIPQGDLVTLFVVLQAVGLPEEAITLILSVDWFLDRIRTSVNVLGDCIGAGIVAHRSEGDLPQIHAPLEAFEN 507
            K+ LL      V++G + G      +  L  P+  +V++ + FPG+I  RMLKML+LPLII+SLI G + LD ++S ++G RA++YY  TT +A VLG+ILV +I PG    +KQ       D+   +D  LDLIRN+FPEN+VQAC +   T  K+V    P     N+T       N+T+T       ++I     ++ G N+LG++ F I  G+ +GKMG QA+  ++   I N++ MKLV   MWYSP+GI  L+  K  ++KD     ++LG Y+ TVI GL +H  I LPL YFV+TR+NPF+F  G F+A +TA  T+SS+ TLPVTF+CLE+N G+D RVTR VLP+GATINMDG+ALYEAVAAIF+AQ  G+ LD G+  T+S  + LAS+GAA IP   LVT+ ++L AVGLP E I+L+++VDW LDR+RTSVNV+GD  GAGIV H S+ +L  I +     E+
Sbjct:   43 KNLLLTLTVFGVILGAVCG-----GLLRLASPIHPDVVMLIAFPGDILMRMLKMLILPLIISSLITGLSGLDAKASGRLGTRAMVYYMSTTIIAAVLGVILVLAIHPGNPKLKKQLGPGKKNDEVSSLDAFLDLIRNLFPENLVQACFQQIQTVTKKVLVAPPPDEEANATSAVVSLLNETVTEVPEETKMVIKKGLEFKDGMNVLGLIGFFIAFGIAMGKMGDQAKLMVDFFNILNEIVMKLVIMIMWYSPLGIACLICGKIIAIKDLEVVARQLGMYMVTVIIGLIIHGGIFLPLIYFVVTRKNPFSFFAGIFQAWITALGTASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGVVLDGGQIVTVSLTATLASVGAASIPSAGLVTMLLILTAVGLPTEDISLLVAVDWLLDRMRTSVNVVGDSFGAGIVYHLSKSELDTIDSQHRVHED 513

The following BLAST results are available for this feature:

BLAST of TCONS_00068692-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00068692-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
EAA2	7.501e-140	47.27	Excitatory amino acid transporter 2 OS=Homo sapien...	[more]

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TCONS_00068692-protein (polypeptide) - C. hemisphaerica