TCONS_00068770-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068770-protein
Unique NameTCONS_00068770-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length634

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068770-protein ID=TCONS_00068770-protein|Name=TCONS_00068770-protein|organism=Clytia hemisphaerica|type=polypeptide|length=634bp
MDVYFEEVSHQQHNNQILIVGEGNFSFAKEFALASNKKYTIYATSFDSKE
TVHKNSFAKENVETLATQHNVRVLHSIDATDLERFFKGQYFSKIIFNFPH
VGGKSNIKKCRQLLKNFFISASNHLCEEGRVLVALCQGQGGTPLDADRGG
YGNTWQVVSQAEFSGFILKDIRPFHFGQLKEYKQAGYRGQIGSGFLTRGG
FVHVFAMGKKCMNPAPPYLQLGCEVPQIQKDILLFKSRMEYSKIAFIALR
NLLHSLITEKFTNLDDYSDFPITKKEDALVDENGVLWARQISHEMITDIS
HRCKAPSFHFRSNLLDVAAPINPMISGLSQNAIYINKEKFEIDDVISHVF
HCFDFKTKDCHGDSIEMKSKFEVGSNPIYPDFAREEEKGGSEEVLDINRV
PAFIEQLPTEYWRSFEPECVISSADEQGVVRHQNISCHDYNLNSLEEHYF
GRDKYSIAEEKTSQRKVLIKGHCVLTILHYKKEDVTVFIFHLDQILLACY
GVLDVRWLYTEDETFHSLLIDTLNKDVENQRISNLEREYLRSIKFSLCHR
HDLCFWLDEKHTERDLFASIRQLCGGNVHSVRLIKVLKHTESNVVSFCYR
MIYSRLDGPFHHEVCVKMQNELRLHLLTMGFSLR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042884XLOC_042884Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068770TCONS_00068770Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005121Fdx_antiC-bd
IPR019446DUF2431
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005121Ferrodoxin-fold anticodon-binding domainSMARTSM00896FDX_ACB_2coord: 550..634
e-value: 0.0068
score: -10.2
IPR005121Ferrodoxin-fold anticodon-binding domainPFAMPF03147FDX-ACBcoord: 549..626
e-value: 3.5E-5
score: 24.0
IPR005121Ferrodoxin-fold anticodon-binding domainGENE3D3.30.70.380coord: 548..634
e-value: 6.5E-11
score: 41.7
IPR005121Ferrodoxin-fold anticodon-binding domainSUPERFAMILY54991Anticodon-binding domain of PheRScoord: 549..625
IPR019446Domain of unknown function DUF2431PFAMPF10354DUF2431coord: 18..185
e-value: 1.1E-38
score: 133.0
NoneNo IPR availableGENE3D3.40.50.150coord: 37..185
e-value: 7.2E-6
score: 24.9

Blast
[Close]
BLAST of TCONS_00068770-protein vs. Swiss-Prot (Human)
Match: FDXA1 (Ferredoxin-fold anticodon-binding domain-containing protein 1 OS=Homo sapiens GN=FDXACB1 PE=1 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 1.930e-33
Identity = 75/193 (38.86%), Postives = 106/193 (54.92%), Query Frame = 0 
Query:   16 QILIVGEGNFSFAKEFALASNKKYTIYATSFDSKETVHKNSFAKENVETLATQHNVRVLHSIDATDLERFFK--GQYFSKIIFNFPHVGGKSNIKKCRQLLKNFFISASNHLCEEGRVLVALCQGQGGTPLDADRGGYGNTWQVVSQAEFSGFILKDIRPFHFGQLKEYKQAGYRGQIGSGFLTRGGFVHVFA 206
            ++L+VGEGNFSFA   +   ++   + AT       + ++  A EN++ L  +  + V   +D T L   F+   + F +I F FPH G K+ + K R+LL  FF S ++ L EEG V VALC+GQGGTP D  +  + N+WQVV+ A   G IL D+ PF    +  YK  GYR Q  S F   G   H+F 
Sbjct:    5 RLLLVGEGNFSFAAALSETLDQSTQLTATCLQRPAELARDPLAWENLQCL-RERGIDVRFGVDCTQLADVFELHEREFDQIYFIFPHCGRKAGVAKNRELLAKFFQSCADVLAEEGEVHVALCRGQGGTPADKPQREWHNSWQVVAMAALGGLILSDVYPFSCKAVAGYKCTGYRSQDKS-FHVEGALNHIFT 195
The following BLAST results are available for this feature:
BLAST of TCONS_00068770-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FDXA11.930e-3338.86Ferredoxin-fold anticodon-binding domain-containin... [more]
back to top