TCONS_00069050-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069050-protein
Unique NameTCONS_00069050-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length470

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069050-protein ID=TCONS_00069050-protein|Name=TCONS_00069050-protein|organism=Clytia hemisphaerica|type=polypeptide|length=470bp
KLFSSSRLPSQLGTSIIIPLVKSYKKSLNDPNNYRGISLIPIMTKVIELV
VLIKCPDISNHTDSQFGFVAGSSTLHAELLISDTLKYYNNRGSSVYVCSL
DAEKAFDSCNWHTLFCKLQNRDIPNQVLSMLIKLYLNGSAIVHYAAHYSK
ELLLTQGVRQGSILSPFLYSIYIEDLLLRVKSLQIGTFLPNNLHTGIIAY
ADDIILMSPTLTHLQMMIDHCIDHGVSNCLRYNQIKTQFTISGKTPIRNP
VIRIDNTIVQKQETLKHLGFQWEIDKNILTLKRHMLDRIACMWSVATSLI
SAGIRKCHPNQIVTLFTPIVVPKYGLELVELNKSDAVLLNTQARICLKAL
FGVSKKSRNLLNTIYNLPDVTTHINKRKLSLLHLATKNPSIAAYMYHMLS
SGDDISHSFTHTANSTVNCLNLDIVHVLLDKNYLTVVNFWSVLVFKELAR
NLYLKNSLIPKDVFVLCCFS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043036XLOC_043036Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069050TCONS_00069050Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 26..271
e-value: 4.1E-33
score: 114.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..272
score: 17.178
NoneNo IPR availableGENE3D3.30.70.270coord: 67..271
e-value: 6.9E-23
score: 80.7
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 14..270
e-value: 1.07411E-37
score: 136.652
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 30..225

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069050-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top