TCONS_00069090-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069090-protein
Unique NameTCONS_00069090-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1984

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069090-protein ID=TCONS_00069090-protein|Name=TCONS_00069090-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1984bp
MADDVRDDQARSISSSSDLKKKTKLTRQNSNSRKGKQKKAKESQVNSSAK
SKSLDNCPKPTKRGNTKKIKSEENISTTKTSASSSVNTTKTKDSVPKSSK
RKTSDSSLTQDQPGPSGVSKQRKKSTTSVEKELKREPAKKRKGKNKTANS
TRRTRSASESNLPENTPTAKEPLKKTKSDSAVEPPRKGKKRKSKALPAFS
PKKLRSSSSLTATGSSTKTTAATSKEIKRKKSSVKTGARSSRGSNPPEVD
EPAGDSSSADKLGSCASRRRNRRSRLQRGEAPEGMENGGNSNADNQETEN
AASNDDQSSEAPLAGAVAALSTSENASSSTDNDLASNLEESDMSRLQALL
EARGLPAHLFGSLGPRMHLLLHKTFNSGAGAKAQQLLTSMQSEDEGTQLQ
GVMEMCQMLVMGNEETLGGFPVKQSVPVLVTLLQMEHNFDIMNHACRALT
YLMEGLPRSSVVVIEAVPTLLEKLQTIQCMDVAEQSLTALEMLSKRHGKN
ILQAGGLGSSLLYLDFFSIVAQRSALAITANCCHSVTVDDFQYVKDSIQV
LSNRLTQQDKKSLESVCLAFARLVDNVQNEKTLIEELCEHNLLANLKQLL
IISPPLISSNTFVTVIRMLATMCSCSSAIAVKLLKLNITETLRYILIGNN
DAPTDEIVDLVPRSPQELYELVCLISELLPELPTDGVFSIDAQLRKGTLQ
NSQLGLWQWKDDKSNWHSYTWVDNRIIEAAYQGGEDEISLSTLGRNYIID
FSNMQQINEDTGTIRSIQRKIGSNAVASSSSSQRDCVIKETDERSCVFEE
DNKVGKGVVQSLIAIVFDVYYSSVGPAVKHKCLTCLLKMIYHSPPDLLKA
VLGKIPISSYIAGMLSSSDLRTVCSALQKADILMSKLTETFHVYFRREGV
MHRIKTLTESDEKDGSRPSSKASSPEDSKHGQAVGGSGKKVSSNDSIEVS
ASSSSSTSKLASLRNRKKNAKKLKGKSSKSSLNDDSPPSLRSKRSNDGMR
PKSATFSSSAHSTNTGSNVASKASFFASFTPRWGRSQSFQNTSSSSNEKS
LKENLGKEIEENREKIRSWIRTTAQELYEKYFTDESGISHPALDILLKLT
SAAKGLTLKGDDDLEALEKIREVLTQDFQEGASAFEMVHSGMVTQLLKYL
TENGTKDGSSRASRIKKFLKVFLGLANTDGQSHSFKVNASTKPVLVSLVQ
KLNLCINQIEQFPVKCQDIPGSGVGGGSRGSSALRFFNTHQIKCNLQRHP
DCSNVKQWCGGAVKIDPLALVQAIERYLVVRGYGRVREDIDSELSDDDER
SDDEIEEGWASQLQVSNNPKHILEFTLNGHVLPYSMTVYQAVRQYAKTSV
DSENEMDDESGPFGRASIWSGTHTIYFRPVTQPTESGPSTSTSTASSSLL
TSSSKRSKTAIDTTSTATSSSSSSAIKPSIATPKDSTDAQSKDAYLTSTL
PGDLNLNDPSVDVICLMRVLYYLNCNWRKFFDLHSSQPVISFNEFVNSKL
TAKATRQLQDPLVIMTGNLPTWLIELAKVCPFLFPFECRQLLFYSTTFDR
DRAIMKLQETVPDLASTDSNDRVAPRLDKKKRTVNRTDLFKQAENILNEF
TGTRALLEIQYDGEVGTGLGPTLEFYSLVSKEFQRSDLEIWRNDSVTKTD
IGGSDSKKKSSYAFSKDGLFPAAIPKNTKSSHVTKIKSKFRYLGKFMAKA
CMDSRMVDINLSEAFYKWIVTQDYTSDICDLRHVDQTLYASLSQLYNVAL
AKRRLENDESRTQESIDSALSILTLDGVPIEDLGLDFVLPGTNYELKKNG
RNTPVTIENLDEYLQLVVEYTLVDGVSVQLEAFKEGFEQFFKLSNLQMFY
PHEIDLLLCGSKSEKWDSKELMECCRADHGYNIDSRAVKFLFEILSKYEA
DEQRLFLQFITGSPKLPVGGFKSLNPPLTIVRKTVDQSANPDNYLPSVMT
CVNYLKLPDYSNVEIMSTKLRTAYSEGKNAFHLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043054XLOC_043054Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069090TCONS_00069090Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018123WWE-dom_subgr
IPR000569HECT_dom
IPR004170WWE-dom
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004842ubiquitin-protein transferase activity
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018123WWE domain, subgroupSMARTSM00678deltexcoord: 702..777
e-value: 2.1E-20
score: 83.8
IPR000569HECT domainSMARTSM00119hect_3coord: 1594..1984
e-value: 7.5E-98
score: 341.1
IPR000569HECT domainPFAMPF00632HECTcoord: 1628..1984
e-value: 6.1E-83
score: 278.7
IPR000569HECT domainPROSITEPS50237HECTcoord: 1598..1984
score: 64.194
IPR000569HECT domainCDDcd00078HECTccoord: 1581..1982
e-value: 2.42556E-102
score: 333.378
IPR000569HECT domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 1779..1977
coord: 1573..1748
NoneNo IPR availableGENE3D3.30.2160.10coord: 1740..1824
e-value: 4.6E-14
score: 51.7
NoneNo IPR availableGENE3D3.30.2410.10coord: 1864..1984
e-value: 1.1E-30
score: 105.7
NoneNo IPR availableGENE3D3.90.1750.10coord: 1576..1739
e-value: 4.1E-34
score: 116.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1379..1438
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1036..1057
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 907..1017
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..311
NoneNo IPR availableCDDcd00020ARMcoord: 384..494
e-value: 1.27773E-4
score: 41.5312
NoneNo IPR availableSUPERFAMILY117839WWE domaincoord: 691..771
IPR004170WWE domainPFAMPF02825WWEcoord: 706..769
e-value: 5.2E-17
score: 62.1
IPR004170WWE domainPROSITEPS50918WWEcoord: 693..769
score: 22.15
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 5..1087
e-value: 1.1E-45
score: 155.5
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 383..680
coord: 800..914

Blast
BLAST of TCONS_00069090-protein vs. Swiss-Prot (Human)
Match: TRIPC (E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1)

HSP 1 Score: 1681.38 bits (4353), Expect = 0.000e+0
Identity = 891/1823 (48.88%), Postives = 1186/1823 (65.06%), Query Frame = 0
Query:  199 FSPKKLRSSSSLTATGSS-TKTTAATSKEIKRKKSSVKTGARSSRGSNPPEVDEPAGDSSSADKL-GSCASRRRNRRSRLQRGEAPEGMENGGNSNADNQETENAASNDDQSSEAPLAGAVAALSTSENASSSTDNDLASNLEESDMSRLQALLEARGLPAHLFGSLGPRMHLLLHKTFNSGAGAKAQQLLTSMQSEDEGTQLQGVMEMCQMLVMGNEETLGGFPVKQSVPVLVTLLQMEHNFDIMNHACRALTYLMEGLPRSSVVVIEAVPTLLEKLQTIQCMDVAEQSLTALEMLSKRHGKNILQAGGLGSSLLYLDFFSIVAQRSALAITANCCHSVTVDDFQYVKDSIQVLSNRLTQQDKKSLESVCLAFARLVDNVQNEKTLIEELCEHNLLANLKQLLIISPPLISSNTFVTVIRMLATMCSCSSAIAVKLLKLNITETLRYILIGNNDAPTDEIVDLVPRSPQELYELVCLISELLPELPTDGVFSIDAQLRKGTLQNSQLGLWQWKDDKSNWHSYTWVDNRIIEAAYQGGEDEISLSTLGRNYIIDFSNMQQINEDTGTIRSIQRKIGSNAVASSSSSQRDCVIKETDERSCVFEEDNKVGKGVVQSLIAIVFDVYYSSVGPAVKHKCLTCLLKMIYHSPPDLLKAVLGKIPISSYIAGMLSSSDLRTVCSALQKADILMSKLTETFHVYFRREGVMHRIKTLTESDEKDGSRPSSKASSPEDSKHGQAVGGSGKKVSS--------------NDSIEVSASSS---SSTSKLASLRNRKKNAKKLKGKSSKSSLNDDSPPSLRSKRSNDGMRPKSATFSSSAHSTNTGSNVASKASFFASFTPR-WGRSQSFQNTSS-----SSNEKSLKENLGKE-IEENREKIRSWIRTTAQELYEKYFTDES-GISHPALDILLKLTSAAKGLTLKGDDDLEALEKIREVLTQDFQEGASAFEMVHSGMVTQLLKYLTENGTKDGSSRASRIKKFLKVFLGLANTDGQSHSFKVNASTKPVLVSLVQKLNLCINQIEQFPVKCQDIP-GSGVGGG---SRGSSALRFFNTHQIKCNLQRHPDCSNVKQWCGGAVKIDPLALVQAIERYLVVRGYGRVREDIDSELSDDDERSDDEIEEGWASQLQVSNNPKHILEFTLNGHVLPYSMTVYQAVRQYAKTSVDSENEMDDESGPFGRASIWSGTHTIYFRPVTQPTESGPSTSTSTASSSLLTSSSKRSKTAIDTTSTATSSSSSS----AIKPSIATPKDSTDAQSKDAYLTSTLPGDLNLNDPSVDVICLMRVLYYLNCNWRKFFDLHSSQPVISFNEFVNSKLTAKATRQLQDPLVIMTGNLPTWLIELAKVCPFLFPFECRQLLFYSTTFDRDRAIMKLQETVPDLASTDSND-RVAPRLDKKKRTVNRTDLFKQAENILNEFTGTRALLEIQYDGEVGTGLGPTLEFYSLVSKEFQRSDLEIWRNDSVTKTDIGGSDSKKKSSYAFSKDGLFPAAIPKNTKSSHVTKIKSKFRYLGKFMAKACMDSRMVDINLSEAFYKWIVTQDYTSDICDLRHVDQTLYASLSQLYNVALAKRRLENDESRTQESIDSALSILTLDGVPIEDLGLDFVLPG-TNYELKKNGRNTPVTIENLDEYLQLVVEYTLVDGVSVQLEAFKEGFEQFFKLSNLQMFYPHEIDLLLCGSKSEKWDSKELMECCRADHGYNIDSRAVKFLFEILSKYEADEQRLFLQFITGSPKLPVGGFKSLNPPLTIVRKTVDQSANPDNYLPSVMTCVNYLKLPDYSNVEIMSTKLRTAYSEGKNAFHLS 1984
            FSPK     + L+  GSS ++T+      ++ K +S++   +    S P E+  P+   S+  K  GSCAS  R      +RG A    +        NQE  N+++   ++ EAP  GA  A+  + +  S +D+        S+M RLQALLEARGLP HLFG LGPRM  L H+T  SGA +KAQQLL  +Q+ DE  QLQ V+EMCQ+LVMGNEETLGGFPVK  VP L+TLLQMEHNFDIMNHACRALTY+ME LPRSS VV++A+P  LEKLQ IQC+DVAEQ+LTALEMLS+RH K ILQAGGL   LLYL+FFSI AQR+ALAI ANCC S+T D+F +V DS+ +L+ RLT QDKKS+ES CL FARLVDN Q+E+ L++++   +LL N++QLL+++PP++SS  F+ V+RM + MCS    +AV+L+K NI ETL ++L G ++    E +DLVPRSPQELYEL  LI EL+P LP +G+F++D  L+KG  QN+   +WQW+DD+  WH Y  +D+RIIE                           QINEDTGT R+IQRK   N +A+S++S      K+ D R+ + +ED ++ K  +++L  ++++VY SS GPAV+HKCL  +L++IY +  +LLK VL    +SS+IA MLSS DL+ V  ALQ A+ILM KL + F VYFRREGVMH++K L ES+       S   S P+   +G    GS   VSS              + S++ S   S   S   +L+ +  RK+  K+   +   S   DD       K  N    P           T T S    K+SF AS  P+ WGR  +  N+++     ++    L     K+ I  NREKI+ WI+  A +  E+YF+ E+   S+PAL++L +L +A + L L+ D   E L +IR ++++      S+FE+ HSG V QLL YLT    KD  SR  R+K+FL VF   +   G+    +V       L++LV K+N C++Q+EQFPVK  D P G+G GG    +RGS AL+FFNTHQ+KC LQRHPDC+NVKQW GG VKIDPLALVQAIERYLVVRGYGRVRE    +   DD+ SD+EI+E  A+Q   S N +H L+F +  H+LPY+MTVYQAVRQ++  + D     DDES P GRA IW+ THTI+++PV +  ES         +   +     R++TA   TS   +          + PS++ P         + YL  T P ++   DPS+DVI L+RVL+ ++  W   +D    + +I  +EF+NSKLTAKA RQLQDPLVIMTGN+PTWL EL K CPF FPF+ RQ+LFY T FDRDRA+ +L +T P++  +DS D RVAPRLD+KKRTVNR +L KQAE+++ +   +RA+LEIQY+ EVGTGLGPTLEFY+LVS+E QR+DL +WR + VT ++  GS    K  Y  +  GLF     +  K +H+ K+K KFR+LGK MAKA MD R+VD+ L   FYKW++ Q+ +    DL  +D  +  S+  L ++   K+RLE D+S+T+ES+  AL  LT++G  +EDLGLDF LPG  N ELKK G++ PVTI NL+EYL+LV+ + L +GVS Q ++F++GFE  F LS+LQ FYP E+D LLCGSK++ WD+K LMECCR DHGY  DSRAVKFLFEILS ++ ++QRLFLQF+TGSP+LPVGGF+SLNPPLTIVRKT + + NPD++LPSVMTCVNYLKLPDYS++EIM  KL  A  EG+ +FHLS
Sbjct:  266 FSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAEL--PSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQEAVNSSAA--RTDEAP-QGAAGAVGMTTSGESESDD--------SEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIE---------------------------QINEDTGTARAIQRK--PNPLANSNTSGYS-ESKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESE-------SLLTSPPKACTNGSGSMGSTTSVSSGTATAATHAAADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDD------DKVDNQAKSP-----------TTTQS---PKSSFLASLNPKTWGRLSTQSNSNNIEPARTAGGSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSES---DVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREIRLKRFLHVFFS-SPLPGEEPIGRVEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVRE---DDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVRQFSIQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEES---------NKDCVGGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNP--------LEVYLIPTPPENITFEDPSLDVILLLRVLHAISRYWYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQEGTK--YIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS 1992          
The following BLAST results are available for this feature:
BLAST of TCONS_00069090-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRIPC0.000e+048.88E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens... [more]
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