TCONS_00069266-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00069266-protein
Unique Name	TCONS_00069266-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	632

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00069266-protein ID=TCONS_00069266-protein|Name=TCONS_00069266-protein|organism=Clytia hemisphaerica|type=polypeptide|length=632bp
MPKMKALCQDIDLDIRSTMCSELELMVDHSSTTAIEESIIPELMLLFQDE
ERTVREVGFASLINIVPKLSPGFIENSNIVESVLNFYRRTLIKKQSFNMV
IAAKYIGKFLFYLKAYLSNENVEFFLEKFQALCSYGNMEATSSFNIDDNF
LSFSGTSLQSSRGSSSIYESTAECRYWCAYNLPAMVQMLPRGTFKDHLHS
CFVVLVKDNQANVRKAVAASLHVVAGMLGEDVHFIFNSLKILLKDANIEV
VDNVLTHLADILICFLHDKVSKILVPDLVPVMLQCEQELSKSLRWRIHEK
LLSSMACLHQHLPSDHIYYRLVPVIYSILTGESKVLPVRLAAARTYLTFI
KYNTSVEERTEMCKRLVTEFAQSPCSRSRIFFIQICYDVADLFSKSFFKE
NVYDTLMTFAADPMVNVRIKFCQILPLMKLQLKLPCDRLLLQLLEQTVRR
IMALESSGEVSSTIRNVISELDSVRLTMDGIDEEEEDREKEDLEEKITEL
FHQQNRQEEHGRSMSLAERATAEKINXRQEEHGRSMSLAERATAEKINPH
HLHHTKGGRNRKSGSFSGALSASARETSKKLSSKSSLTSSNISPRKIGST
TTSKSNHSSFGSGARLSSKKSSTHSTSTKRPK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043154	XLOC_043154	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00069266	TCONS_00069266	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR021133	HEAT_type_2
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 483..510
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..473 e-value: 6.3E-32 score: 110.3
IPR021133	HEAT, type 2	PROSITE	PS50077	HEAT_REPEAT	coord: 39..77 score: 9.449
IPR021133	HEAT, type 2	PROSITE	PS50077	HEAT_REPEAT	coord: 198..232 score: 8.719
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 2..450

Blast

[Close]

BLAST of TCONS_00069266-protein vs. Swiss-Prot (Human)
Match: PP4R4 (Serine/threonine-protein phosphatase 4 regulatory subunit 4 OS=Homo sapiens GN=PPP4R4 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.751e-74
Identity = 183/648 (28.24%), Postives = 320/648 (49.38%), Query Frame = 0

Query:    1 MPKMKALCQDIDLDIRSTMCSELELMVDHSSTTAIEESIIPELMLLFQDEERTVREVGFASLINIVPKLSPGFIENSNIVESVLNFYRRTLIKKQSFNMVIAAKYIGKFLFYLKAYLSNENVEFFLEKFQALCSYGNMEATSSFNIDDNFLSFSGTSLQSSRGSSSIYESTAECRYWCAYNLPAMVQMLPRGTFKDHLHSCFVVLVKDNQANVRKAVAASLHVVAGMLGEDVHFIFNSLKILLKDANIEVVDNVLTHLADILICFLHDKVSKIL------VPDLVPVMLQCEQELSKSLRWRIHEKLLSSMACLHQHLPSDHIYYRLVPVIYSILTGESKVLPVRLAAARTYLTFIKYNTSVEERTEMCKRLVTEFAQSPCSRSRIFFIQICYDVADLFSKSFFKENVYDTLMTFAADPMVNVRIKFCQILPLMKLQLKLPCDRLLLQLLEQTVRRIMALESSGEVSSTIRNVISELDSVRLTMDGIDEEEEDREKED------LEEKITELFHQQNRQEEHGRSMSLAERATAEKINXRQEEHGRSMSLAER-----ATAEKINPHHLHHTKGGRNRKSGSFSGALSASARETSKKLSSKSSLTSSNISPRKIGSTTTSKSNHSSFGSGARLSSKKSSTHSTSTKRP 631
            +P +K+LCQD++ ++RS MC +LE +     T   +  ++PEL+ L +DE  +VR   F +L+N++         +  I+  V +F  ++    +S  ++  + ++GK    L    + +    FLE ++ LC+ G ++  +  N +          L+  +   S+       R  CAYN PAM+  +    F   L+S F  L  D +  VR  +A   + V+ +L   V+ I   L  LL+D ++EV+D ++ HL +IL        S +       +PDL+P +   EQ  + SL+WR HEKLL   ACL   + SD IYYR +  +++I+   + VLPV+ AA+RT   F++YN   E+R E+ ++L+ +  Q     +R+ F+  C  + ++FSKSFF +  +   +    DP+ NVR+K C +LP +K  LK+P D+ LLQ LE  VR+++  E   +V + ++  + ELD + ++MD   ++  +++  D          +     ++ +Q+  GR MS  ++   +K   R++    + SL +           + P      K  +  +S SF+     +     +K +SKSS T    S   +G T+       SF +  R +S   S+ S +T  P
Sbjct:  214 LPLVKSLCQDVEYEVRSCMCRQLENIAQGIGTELTKSVVLPELIELSRDEGSSVRLAAFETLVNLLDIFDTD-DRSQTILPLVKSFCEKSFKADESI-LISLSFHLGKLCHGLYGIFTPDQHLRFLEFYKKLCTLG-LQQENGHNEN----QIPPQILEQEKKYISV-------RKNCAYNFPAMIVFVDPKNFHMELYSTFFCLCHDPEVPVRYTIAICFYEVSKLLNSGVYLIHKELITLLQDESLEVLDALIDHLPEILELMSTGGESSVQENKLSSLPDLIPALTAAEQRAAASLKWRTHEKLLQKYACLPHVISSDQIYYRFLQRMFTIMMT-NNVLPVQKAASRTLCIFLRYNRKQEQRHEVIQKLIEQLGQGKSYWNRLRFLDTCEFIIEIFSKSFFCKYFFLPAIELTHDPVANVRMKLCYLLPKVKSTLKIPADKHLLQQLEMCVRKLLCQEKDKDVLAIVKRTVLELDRMEMSMDAFQKKFYEKDLLDQEKEREELLLLEMEQLEKEKQQNDGRPMS--DKMFEKK---RRDTKTPTQSLPKNIPISVPGPSSVTPSTSKEIKKSKLIRSQSFNNQAFHAKYGNLEKCASKSSTTGYTTSVSGLGKTSVLSLADDSFRT--RNASSVPSSFSPNTPLP 839

The following BLAST results are available for this feature:

BLAST of TCONS_00069266-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00069266-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PP4R4	1.751e-74	28.24	Serine/threonine-protein phosphatase 4 regulatory ...	[more]

You are here

TCONS_00069266-protein (polypeptide) - C. hemisphaerica