TCONS_00069349-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069349-protein
Unique NameTCONS_00069349-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length475

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069349-protein ID=TCONS_00069349-protein|Name=TCONS_00069349-protein|organism=Clytia hemisphaerica|type=polypeptide|length=475bp
SASKTISATKSKLIMNYQTNNRDCQAWKDEGLEMSTTSNEAAKLLDHAID
QMFCHVADPTIGGVIGTVDKMLEADPDFFMAKIFSIGVQGGCCRNSRTIA
KLVSELESVDDSKLNEREKLHRKASIEWATEKKRDACRTWEYILLQYPKD
TIAILFSFYGYIITGQSRMLRDSLARTLPYWRESDFHYGYLQGYYAFGLE
QSNQFVQAEKAVKKSLEINPDNTWGFHAYSHIFDATCRSQEGVDFLEEND
TFLTDDNRLTCHLFWHQTVNLTELGHYDRALKLYDDKILSFKRTPNAYHL
SDSVQVLQRLEFEGINVGDRWEEVYSVYKPMYKSHELVYDDMHLTAAMIR
SKTGRESKSNFFESMEEHLNKSLDTTYGDVGKRIGFPFAKGIAAYCEGNF
EEASNLFIPVYKDIWEIGGSKATQDIFNQYVINACVRSPNQFHKRMARSL
LHERKLFRPDSLLTDRVLAKLDAYH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043217XLOC_043217Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069349TCONS_00069349Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 96..409
e-value: 1.7E-8
score: 33.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 120..248

Blast
[Close]
BLAST of TCONS_00069349-protein vs. Swiss-Prot (Human)
Match: TTC38 (Tetratricopeptide repeat protein 38 OS=Homo sapiens GN=TTC38 PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 9.921e-93
Identity = 152/460 (33.04%), Postives = 245/460 (53.26%), Query Frame = 0 
Query:   22 RDCQAWKDEGLEMSTTSNEAAKLLDHAIDQMFCHVADPTIGGVIGTVDKMLEADPDFFMAKIFSIGV----QGGCCRNSRTIAKLVSELESVDDSK-LNEREKLHRKASIEWATEKKRDACRTWEYILLQYPKDTIAILFSFYGYIITGQSRMLRDSLARTLPYWRESDFHYGYLQGYYAFGLEQSNQFVQAEKAVKKSLEINPDNTWGFHAYSHIFDATCRSQEGVDFLEENDTFLTDDNRLTCHLFWHQTVNLTELGHYDRALKLYDDKIL-SFKRTPNAYHLSDSVQVLQRLEFEGINVGDRWEEVYSVYKPMYKSHELVYDDMHLTAAMIRSKTGRESKSNFFESMEEHLNKSLDTTYGDVGKRIGFPFAKGIAAYCEGNFEEASNLFIPVYKDIWEIGGSKATQDIFNQYVINACVRSPNQFHKRMARSLLHERKLFRPDSLLTDRVLAKLDAYH 475
            RDCQAWKD  L +STTSNEA KL D  + Q      D ++GG+ G + K+  ADP F M    + G+     G   +  + +   V  +  +  ++ L  RE+LH  A   +A      AC  WE IL  +P D +A+ FS   Y   G    +RDS+AR  P+W        Y++G Y+FGL ++N + QAEK  K++L INP + W  H  +HI +     ++G++F++ ++TF  D + L CH +WH  + L E G Y+ AL +YD  IL S +       + DS  +L RL+ EG++VG RW++V  V +   + H L+++D H   A + +   + ++     ++ +      +     + + +G P  + +    +GN +    L +P+   I ++GGS A +D+FNQ +I+A +   +  HK +ARSLL ER   +P+S LT+R++ K    H
Sbjct:    8 RDCQAWKDARLPLSTTSNEACKLFDATLTQYVKWTNDKSLGGIEGCLSKLKAADPTFVMGHAMATGLVLIGTGSSVKLDKELDLAVKTMVEISRTQPLTRREQLHVSAVETFANGNFPKACELWEQILQDHPTDMLALKFSHDAYFYLGYQEQMRDSVARIYPFWTPDIPLSSYVKGIYSFGLMETNFYDQAEKLAKEALSINPTDAWSVHTVAHIHEMKAEIKDGLEFMQHSETFWKDSDMLACHNYWHWALYLIEKGEYEAALTIYDTHILPSLQANDAMLDVVDSCSMLYRLQMEGVSVGQRWQDVLPVARKHSRDHILLFNDAHFLMASLGAHDPQTTQ-ELLTTLRDASESPGENCQHLLARDVGLPLCQALVEAEDGNPDRVLELLLPIRYRIVQLGGSNAQRDVFNQLLIHAALNCTSSVHKNVARSLLMERDALKPNSPLTERLIRKAATVH 466
The following BLAST results are available for this feature:
BLAST of TCONS_00069349-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC389.921e-9333.04Tetratricopeptide repeat protein 38 OS=Homo sapien... [more]
back to top