TCONS_00069615-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069615-protein
Unique NameTCONS_00069615-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length362

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069615-protein ID=TCONS_00069615-protein|Name=TCONS_00069615-protein|organism=Clytia hemisphaerica|type=polypeptide|length=362bp
MYSLLRQRLITVNRPVLSSWFHLSVNVSSKKKSSLKDLIENISNKETNQY
LDNLVKNVQDQNQKKQQRKQYAIKKAQMKKEKMNDFDSSTKEVGQKFWFP
ETEKTKSEKSRKQAKNKKPAKKEMKSETMEGSPDIGVDTESELDIGVLRE
KIKSDHNNREVSRLMSAMIDRIDQGADDVEVNFQKLVKSFSNTDQRRKGK
QNLRNQDSSKTTQRRTPPKLSFNNPTSLFTNLSNDTQEIARPNYFESNWN
KDLNNLLPEMKPLNAFDAKMLNIDREWNFPIDNEQDIGIEEETGFDEHVF
LDHLLEEFPEEGPVYKFIELVITGLQQNPHLTVEEKTNQVLWFKEYFDKF
PEDDLKISNLEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043351XLOC_043351Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069615TCONS_00069615Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026299MRP-S31
Vocabulary: Cellular Component
TermDefinition
GO:0005763mitochondrial small ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005763 mitochondrial small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..138
IPR026299Mitochondrial 28S ribosomal protein S31PFAMPF15433MRP-S31coord: 51..349
e-value: 3.7E-33
score: 115.5

Blast
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BLAST of TCONS_00069615-protein vs. Swiss-Prot (Human)
Match: RT31 (28S ribosomal protein S31, mitochondrial OS=Homo sapiens GN=MRPS31 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 4.563e-18
Identity = 38/86 (44.19%), Postives = 60/86 (69.77%), Query Frame = 0 
Query:  277 WNFPIDNEQDIGIEEETGFDEHVFLDHLLEEFPEEGPVYKFIELVITGLQQNPHLTVEEKTNQVLWFKEYFDKFPEDDLKISNLEF 362
            W FPI+NE     ++ + F EH+FL+  LE FP++GP+  F+ELV  GL +NP+L+V++K   + WF+ YF++  +D LK SN++F
Sbjct:  311 WEFPINNEAGFD-DDGSEFHEHIFLEKHLESFPKQGPIRHFMELVTCGLSKNPYLSVKQKVEHIEWFRNYFNE-KKDILKESNIQF 394
The following BLAST results are available for this feature:
BLAST of TCONS_00069615-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RT314.563e-1844.1928S ribosomal protein S31, mitochondrial OS=Homo s... [more]
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