TCONS_00069630-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069630-protein
Unique NameTCONS_00069630-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1150

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069630-protein ID=TCONS_00069630-protein|Name=TCONS_00069630-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1150bp
MLQKSSTVVLISKKWSILHHCLSLDQLNVKILYDSSMKVRKNGIYNVEFV
FKLSESKESIDLEIGLLHDEPLLYSKENSIRSGNTLKLSSTVRLNADMLF
GFYIKGNKESPVKGVCRVKLTYLGDHHSIIGFQANLQKNFITQGNTGYFR
INKYDKPNSDLYYNTYEGFDHDRGIFKAPFRGIYLVSINVVILKVIMNSK
QNYVAVMLKVNDKETIFFDLKEHKFLSKDEQNPRNSTISFCMSGALHLND
HDKVHIEVYVNNDVQWEIDSRSSFSMVMLTSQNNGFSAYRPSIKLKNTDQ
MNQKIVSGWELGHPASPYAMFKGTTKSAPKLDGGDNIKFAVSGNYLISVQ
ILMQYQEPQKELTLKLVESSSQKKKTIEFECDTYTMNFNVMSISCQFFGN
FDKDEIYTVQISTGVRSFIGVYNFYNNKQNNDENMAYLSVVLLGNVVDYQ
AGLLYLQYDQEFSGGVSTIETWQYPNLLNTPGNYGFDTTNGVLNVIAKGW
FLFTATVFCRRTFGNGTIDLVRRGDAAGNVLLRAKGECHKHQRSLSFIGV
QHLDRNEQISLQQSGYGGGDIVAKETHWSFSYLKWNCKRYYVNSRIDYHT
RAQKKYDQPITWSESKTDKVAVSKIPLESKGVYFITINLIITTASDFQVQ
LMAVYKDECTSKQSSKTQSPALRTHTVALACAIVIRQSNPWITINLQGNG
NIQIESESTASVSFITKNHLEHPLLILRMNAPMNYHSWGTKNIRKYSIQS
MSIFFFNNLQTAITIYGGTYLISCHMVITVEKPREMTLGVLVNQELAIST
KEYVSDTKTVSIKQIAYLRQGATLSLVLYPGSHVIEKGSTWNILLLDAPN
GGDSESMLPVISQDLTHGNKILVNADQELSCDAVAPRSITYQWFFNNKIL
ANEVFETLHPSKYMELGSGRYQCQALSDLYQVGPVSRAAYIKISPVNECE
KQPGICGEGATCHDKQVGFECRCENQKYEHVKGKGCVAVAAKKDDKSSKP
GRSLVILILIPFVCLTILIVIACTIYVCMKRRQIHRRDPERQAVVGAENS
DDITMQSLNNSLAEDYSDIENERTSLSSGATQNTNSENGGVHFLTVPTSS
QQQPRRTRFNTHPRFLGGSRDSRLDEESSPRPDLNWRKFSNGSVQVIYRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043358XLOC_043358Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069630TCONS_00069630Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008983Tumour_necrosis_fac-like_dom
IPR013783Ig-like_fold
IPR001073C1q_dom
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR000742EGF-like_dom
IPR007110Ig-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.25.10coord: 943..1010
e-value: 8.8E-6
score: 25.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1073..1136
NoneNo IPR availableCDDcd00096Igcoord: 878..925
e-value: 0.00660696
score: 35.1575
NoneNo IPR availableCDDcd00054EGF_CAcoord: 946..973
e-value: 1.14088E-4
score: 40.3126
IPR008983Tumour necrosis factor-like domainGENE3D2.60.120.40coord: 283..419
e-value: 0.31
score: 10.2
IPR008983Tumour necrosis factor-like domainGENE3D2.60.120.40coord: 593..720
e-value: 0.11
score: 12.0
IPR008983Tumour necrosis factor-like domainGENE3D2.60.120.40coord: 454..582
e-value: 6.7E-5
score: 22.2
IPR008983Tumour necrosis factor-like domainGENE3D2.60.120.40coord: 758..853
e-value: 0.0067
score: 15.8
IPR008983Tumour necrosis factor-like domainGENE3D2.60.120.40coord: 128..282
e-value: 1.1E-11
score: 44.4
IPR008983Tumour necrosis factor-like domainSUPERFAMILY49842TNF-likecoord: 157..279
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 857..927
e-value: 7.6E-4
score: 19.1
IPR001073C1q domainPFAMPF00386C1qcoord: 153..275
e-value: 4.9E-6
score: 26.7
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 962..973
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 945..987
score: 9.858
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 849..944
score: 7.504
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 871..930

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069630-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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