TCONS_00069676-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069676-protein
Unique NameTCONS_00069676-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length582

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069676-protein ID=TCONS_00069676-protein|Name=TCONS_00069676-protein|organism=Clytia hemisphaerica|type=polypeptide|length=582bp
MENSESSNYSSNSSQPLLVSTVLSTNVLHAKIGSNSTPKDKLRRCKKCRK
TFKNHGTYLSHVRFHKNNLKLKNRYGSKNKSDVFQQQEFQCKTCNATCTG
IPAFLDHMKRHSDQQMDVTSYIADDGRNQLQNEEVNISDQTIELSQALSD
QNAQLSNEELQQISALQQQSNAQQMVFPQGNAGLHIEIPSHIKTLSFNNS
NNSNSNTAQITQLNTLMKSIESLHSKIDVVIKHLNIPLDAEGNPLPPATE
LPAATQTIEVNPQSNVTDANPSEQKNSPDTSQQHEQQKTDLGEETEGETA
VLLEGFPPSYSLVQAAKEQQQQEFYALTLSGRNPQQLTQATSNDLKMLKG
KTGGSVDFWVPSTNQHYILAEAQTDEDTDELTIPLADTPSTSSSTNHSLS
PPIPASVIEKVFIESRSRANFAKNLTFAIYSKEERYNRNCTGRVFGRAQN
KQQLDPEKLAAVKEATFNKYPCGPNLVDITWRKECITAIDSGLRNEHRAS
LKGGNTLVHGQEPGTNNVLATNAHHIEEQNQVTQQTHHQMVANYPLSQQQ
HTPQPQQHVVQQDTQQAQQIEIESKMEGILAE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043384XLOC_043384Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069676TCONS_00069676Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018379BEN_domain
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018379BEN domainSMARTSM01025BEN_2coord: 419..500
e-value: 4.3E-7
score: 39.6
IPR018379BEN domainPFAMPF10523BENcoord: 420..495
e-value: 2.7E-11
score: 43.5
IPR018379BEN domainPROSITEPS51457BENcoord: 397..500
score: 11.755
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 43..65
e-value: 0.73
score: 18.9
coord: 89..111
e-value: 0.0081
score: 25.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 45..65
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 91..111
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 43..70
score: 9.307
NoneNo IPR availableGENE3D2.40.155.10coord: 432..580
e-value: 0.16
score: 11.5
NoneNo IPR availableGENE3D2.160.10.10coord: 27..196
e-value: 5.0E-9
score: 35.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..297

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069676-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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