TCONS_00069683-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069683-protein
Unique NameTCONS_00069683-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1082

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069683-protein ID=TCONS_00069683-protein|Name=TCONS_00069683-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1082bp
CTELKMTNSAMMDDHKDAHDNILEIQHKFTEICSNLNIESFITEQAWDEF
RRINGNVTLEGNQMHWLICSLYISILKSSLKSGQNHAKNIPLSKLLFSVQ
MSLLHFFQKARKWLDMGRYGPKLNEKIEQLERNFSVSSIVFEKYSGIFKQ
VFQLDHVETIKRGRKKHTVSSKDIFVFCWTLYVRTKVRYPDITDDLVNSY
HLLLCCIDLVFTNVVLLKQIKNCINSDFSGLPDKEDLTVTDIPSISIIDV
LCQLFEGLAIETKIIRRQYLGSLIEELIGNESLKGVSGHNAGLLDVANLE
YNLKYLNDSYEEHITQVGDFDERIFVKEDSESHIGTPTKRVTAFTEVDEK
ERSMVKRNLQEYFNTVKGFPPQTPLTGRQWLNAKEMQSKTEPQSIINSIA
RIQEIVKGLKPAPTDNLRNILKSFKENPESKLSDEITRLSNIFIEEYIKP
SNKSSQNAQSNDFAKTRLSLALVLFYKILETFLEFEKKKSASADLSVLFE
NDIFVKSLLSCCLEIVIYSYNNSNRIFPWVLNAFKLKPYHFFKIIELVIR
SEDLSRDVIKHLNRIEEQILDSLSWKTESPIYTSISSLGVPRCQDVSADN
GIMTPLIFMSPTTLRVGKDAIQGSPIISIPQKGVIPPPSPARRNLFGSAA
KTAGETPSSTLTISAPPSNNQPQTPSQSPKQPAQSLNKTTTAVVLPAKTM
TPNVNPLPSTVRFPIMLHSPGSSPVRFYALANKPGAQPKSGIIRIQASPS
KSAAAKKFGSLGIFFRKLYHMTYVRLKDLCEKLEIGVDLQKKIWTCFEHS
VVENNDMMRDRHVDQLLMCAVYVMAKVTKDDKSFHEIMRCYRTQPQASSE
VYRRVLIERFIRTDPAAPASEKTETEKNGETETSEEAAEKKGDDQSNVKQ
EESEQDSGDVVMKEIKQEEKEEENKETVVNNEDECTTRDVYNDLIQFYNL
VYIKKIKEFALKFASNKVTLDAPPLSPLPVTRRHNPSPKKLSKQHQVFIS
PIKPNIQMTPRSKMLYCFDSDSPKKLDEINRMIKGGTRRRVNLDDPETGP
SLAKRPMNGLAKRAQELRHDQMNAARILLNNK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043388XLOC_043388Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069683TCONS_00069683Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002720RB_A
IPR015030RB_C
IPR024599RB_N
IPR002719RB_B
IPR013763Cyclin-like
Vocabulary: Biological Process
TermDefinition
GO:0051726regulation of cell cycle
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051726 regulation of cell cycle
cellular_component GO:0005634 nucleus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 912..932
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 651..688
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 866..911
IPR002720Retinoblastoma-associated protein, A-boxSMARTSM01368RB_A_2coord: 391..585
e-value: 1.6E-73
score: 260.3
IPR002720Retinoblastoma-associated protein, A-boxPFAMPF01858RB_Acoord: 391..585
e-value: 6.3E-61
score: 205.6
IPR015030Retinoblastoma-associated protein, C-terminalSMARTSM01369Rb_C_2coord: 960..1076
e-value: 5.6E-5
score: 28.5
IPR024599Retinoblastoma-associated protein, N-terminalSMARTSM01367DUF3452_2coord: 73..213
e-value: 4.4E-40
score: 149.2
IPR024599Retinoblastoma-associated protein, N-terminalPFAMPF11934DUF3452coord: 86..213
e-value: 1.8E-33
score: 114.9
IPR002719Retinoblastoma-associated protein, B-boxPFAMPF01857RB_Bcoord: 760..957
e-value: 5.8E-45
score: 152.5
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 397..575
e-value: 4.8E-53
score: 179.2
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 743..982
e-value: 1.6E-56
score: 190.3
coord: 19..90
e-value: 0.0074
score: 15.6
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 760..859
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 398..586

Blast
BLAST of TCONS_00069683-protein vs. Swiss-Prot (Human)
Match: RBL1 (Retinoblastoma-like protein 1 OS=Homo sapiens GN=RBL1 PE=1 SV=3)

HSP 1 Score: 659.062 bits (1699), Expect = 0.000e+0
Identity = 421/1110 (37.93%), Postives = 613/1110 (55.23%), Query Frame = 0
Query:   32 ICSNLNIESFITEQAWDEFRRINGNVTLEGNQMHWLICSLYISILKS---SLKSGQNHAKNIPLSKLLFSVQMSLLHFFQKARKWLDMGRYGPKLNEKIEQLERNFSVSSIVFEKYSGIFKQVFQLDHVETIK--RGRKKHTV--SSKDIFVFCWTLYVRTKVRYPDITDDLVNSYHLLLCCIDLVFTNVVLLKQIKNCINSDFSGLPD---KEDLTVTDIPSISIIDVLCQLFEGLAIETKIIRRQYLGSLIEELIGNESLKGVSGHNAGLLDVANLEYNLKYLNDSYEEHITQVGDFDERIFVKEDSESHIGTPTK--RVTAFTEVDEKERSMVKRNLQEYFNTVKGFPPQTPLTGRQWLNAKEMQSKTEPQSIINSIARIQEIVKGLKPAPTDNLRNILKSFKENPESKLSDEITRLSNIFIEEYIKPSNKSSQNAQSNDFAKTRLSLALVLFYKILETFLEFEKKKSASADLSVLFENDIFVKSLLSCCLEIVIYSYNNSNRIFPWVLNAFKLKPYHFFKIIELVIRSED-LSRDVIKHLNRIEEQILDSLSWKTESPIYTS--ISSLGVPRCQDVSADNGIMT----------PLIFMSP-------------TTLRVGKDAIQGSPIISIPQKGVIPPPSPARRNLFGSAAK---------TAGE----TPSSTLTISAPPSNNQPQTPSQSPKQPAQSLNKTTTA--VVLPAKTMTPNVNPLPSTVRFPIMLH----SPGSSPVRFYALANKPGAQPK-SGIIRIQASPSKSA-AAKKFGSLGIFFRKLYHMTYVRLKDLCEKLEIGVDLQKKIWTCFEHSVVENNDMMRDRHVDQLLMCAVYVMAKVTKDDKSFHEIMRCYRTQPQASSEVYRRVLIERFIRTDPAAPASEKTETEKNGETETSEEAAEKKGDDQSNVKQEESEQDSGDVVMKEIKQEEKEEENKETVVNNEDECTTRDVYNDLIQFYNLVYIKKIKEFALKF--ASNKVTLDAPPLSPLPVTRRHNPSPKKLSKQHQVFISPIKPNIQMTPRSKMLYCFDSDSPKKLDEINRMIKGG---TRRRVNLDDPETGPSLAKRPM----NGLAKRAQELRHDQMN 1073
            +C  LN++     +A D+F  I GN +LEG   HWL CSLY++  KS   ++  G      + L+++L S ++SL+ FF K +KW+DM     +  E+IE+LERNF VS+++F+KY  IF  +FQ  + E  K  R RK+  +  S KD+F FCWTL+V TK  +  I DDLVNSYHLLLCC+DL+F N ++    ++ +N  F GLP      D T ++ P   II VLC+L +GL +E K I+  Y    I +L   + LKG       LLD+++   N K +N  YEE++  VGDFDERIF+  D+E  IGTP K  R T   ++  +  + V+ NLQ++F   + F P TPLTGR++L  KE    T   S   S++R+Q IV GLK AP+D L NI +S   NP   +   +  +   F + Y + +++  Q     DFA  RL LA +L+YKILET +  E ++    D+SVL E DIF +SL++CCLEIV+++Y+ S R FPW++    L+P++F+K+IE+VIRSE+ LSRD++KHLN IEEQIL+SL+W  +S ++ +  +S+  VP C++V   N   T          PL+ MSP              +LR  +D    SPI S+ ++   P    A+R LFG             T G      PSS++T     + N    P Q+    A +    TT   V +P   +    N        P+ ++    S   SPV   A  +  GA PK + + + Q   S      K+ GSL +F+RK+YH+  VRL+DLC KL++  +L++KIWTCFE ++V   D+M+DRH+DQLL+CA Y+MAKVTK++++F EIM+ YR QPQA+S VYR VL++   R      A  K   +     +   E A K  D  S   +EE                                        DLI+FYN +Y+ ++K FALK+  A+    +DAPPLSP P  ++   SP+++S+QH ++ISP K    +TPRS +LY F+    K L +IN MI+ G   T++RV   D +   S AKR      + L KR Q++  ++ N
Sbjct:   24 LCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKGIMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFTASEEPP-CIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRKILKG-----ECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTRDTPLGKLTAQ--ANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKE-AVITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPVENIMKILKGIGETFCQHYTQSTDE--QPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYS-SPRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEEVIFPNNFETGNGGNVQGHLPLMPMSPLMHPRVKEVRTDSGSLR--RDMQPLSPI-SVHERYSSPTAGSAKRRLFGEDPPKEMLMDKIITEGTKLKIAPSSSIT-----AENVSILPGQTLLTMATAPVTGTTGHKVTIPLHGVA---NDAGEITLIPLSMNTNQESKVKSPVSLTA-HSLIGASPKQTNLTKAQEVHSTGINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPR---EVVAYNKNINDDFEMIDCDLEDATKTPDCSSGPVKEER--------------------------------------GDLIKFYNTIYVGRVKSFALKYDLANQDHMMDAPPLSPFPHIKQQPGSPRRISQQHSIYISPHKNGSGLTPRSALLYKFNGSPSKSLKDINNMIRQGEQRTKKRVIAIDSD-AESPAKRVCQENDDVLLKRLQDVVSERAN 1067          
The following BLAST results are available for this feature:
BLAST of TCONS_00069683-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RBL10.000e+037.93Retinoblastoma-like protein 1 OS=Homo sapiens GN=R... [more]
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