TCONS_00069743-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069743-protein
Unique NameTCONS_00069743-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length321

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069743-protein ID=TCONS_00069743-protein|Name=TCONS_00069743-protein|organism=Clytia hemisphaerica|type=polypeptide|length=321bp
MWGVGNIFFTIVYICILSVSFIGNLLIIAIIIRSKQLRQRNTNLLIFNLA
ISDLLVATINVPYNISVLIGATKNIFTCKLAVFVAVLCFTVAQFNLLLIT
VDRYLGINHPLKYRARITTRKTISAIVIAWIISNVVAAFPVIHRPDPSSL
VKRNTKICLLADLLAPITLSCFLMVVFYLPVLITIVLYLRILTTIARARD
SNIRTSSTCRNQSSSSKKGLAKTENNGQPPHSKCKRVANICKHEIKSAKI
VLVQIALYVGCMLPITIYDMYVSFSQDLTNSDVITQMLLLLAYCSSAINP
FLYGIRDPKYRKAIKDLFHCM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043428XLOC_043428Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069743TCONS_00069743Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 8..32
score: 22.97
coord: 85..107
score: 31.4
coord: 285..311
score: 28.27
coord: 42..63
score: 37.71
coord: 121..142
score: 19.58
coord: 247..271
score: 17.89
coord: 169..192
score: 26.45
IPR000276G protein-coupled receptor, rhodopsin-likeSMARTSM013817TM_GPCR_Srsx_2coord: 17..318
e-value: 5.9E-5
score: -36.4
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 23..303
e-value: 1.9E-43
score: 148.6
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 91..107
NoneNo IPR availableGENE3D1.20.1070.10coord: 2..321
e-value: 3.8E-62
score: 209.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..232
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 6..320
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 23..303
score: 40.693

Blast
[Close]
BLAST of TCONS_00069743-protein vs. Swiss-Prot (Human)
Match: DRD1 (D(1A) dopamine receptor OS=Homo sapiens GN=DRD1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 4.376e-27
Identity = 91/323 (28.17%), Postives = 147/323 (45.51%), Query Frame = 0 
Query:   23 GNLLIIAIIIRSKQLRQRNTNLLIFNLAISDLLVATINVPYN-ISVLIGATKNIFTCKLAVFVAVLCFTVAQFNLLLITVDRYLGINHPLKYRARITTRKTISAIVIAWIISNVVAAFPV---IHRPDPSSLVKRNTKICLLADLLAPITLSC-----------FLMVVFYLPVLITIVLYLRILTTIARARDSNIRTSSTCRNQSSSSKKGLAKTENNGQP-----PHSKCKRVANICKHEIKSAKIVLVQIALYVGCMLPITIYDMYVSF-----SQDLTNSDVITQMLLLLAYCSSAINPFLYGIRDPKYRKAIKDLFHC 320
            GN L+ A +IR + LR + TN  + +LA+SDLLVA + +P+  ++ + G       C + V   ++C T +  NL +I+VDRY  I+ P +Y  ++T +     I +AW +S +++  PV    H+  P+S    N      A  LA    +C             ++ FY+PV I IV Y RI     R     IR  +    +++   K    T  NG+P     P S  K      K E K  K + V + ++V C LP  I +  + F     +Q          + +   + +S++NP +Y   +  +RKA   L  C
Sbjct:   40 GNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLISFIPVQLSWHKAKPTSPSDGN------ATSLAETIDNCDSSLSRTYAISSSVISFYIPVAIMIVTYTRIY----RIAQKQIRRIAALE-RAAVHAKNCQTTTGNGKPVECSQPESSFKMSF---KRETKVLKTLSVIMGVFVCCWLPFFILNCILPFCGSGETQPFCIDSNTFDVFVWFGWANSSLNPIIYAF-NADFRKAFSTLLGC 347
The following BLAST results are available for this feature:
BLAST of TCONS_00069743-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DRD14.376e-2728.17D(1A) dopamine receptor OS=Homo sapiens GN=DRD1 PE... [more]
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