TCONS_00069918-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069918-protein
Unique NameTCONS_00069918-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length267

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069918-protein ID=TCONS_00069918-protein|Name=TCONS_00069918-protein|organism=Clytia hemisphaerica|type=polypeptide|length=267bp
MHLLGHTNLLSEYSWTEIIYIKMLHRMYLIMIPSYCRKTQKEIKMSKRQR
GVHSPPIAKMVLLGNEGVGKSALMVRFFTRRFIGEYDPTLESTHRRHLGI
GNSTMIIDMKDTAGENDTQRREIDFVWGDVFVLVYSIIDRKSFQEIQKLR
KVIEMMRGPNTTFVVIGNKKDLSHLREVSKEEGKKWAEKHNALFFEISVA
EDYHETQKVFNEIIRYIICQKAREESTTGKKRNHSYSSLWKGMKSRDQKD
KKHEHVIHIQSSGGYSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043533XLOC_043533Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069918TCONS_00069918Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 159..172
score: 42.08
coord: 98..120
score: 23.55
coord: 81..97
score: 23.71
coord: 58..79
score: 43.84
coord: 195..217
score: 19.87
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 59..220
e-value: 1.8E-38
score: 143.8
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 58..220
e-value: 1.9E-11
score: 33.3
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 60..220
e-value: 1.0E-5
score: -44.3
NoneNo IPR availableGENE3D3.40.50.300coord: 122..218
e-value: 2.7E-21
score: 74.9
NoneNo IPR availableGENE3D3.30.70.1390coord: 57..121
e-value: 2.0E-10
score: 40.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..267
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 58..211
e-value: 3.2E-16
score: 57.5
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 59..217
e-value: 2.0E-35
score: 121.7
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 53..258
score: 19.127
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 58..217

Blast
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BLAST of TCONS_00069918-protein vs. Swiss-Prot (Human)
Match: RERG (Ras-related and estrogen-regulated growth inhibitor OS=Homo sapiens GN=RERG PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.062e-45
Identity = 77/181 (42.54%), Postives = 111/181 (61.33%), Query Frame = 0 
Query:   59 KMVLLGNEGVGKSALMVRFFTRRFIGEYDPTLESTHRRHLGIGNSTMIIDMKDTAGENDTQRREIDFVWGDVFVLVYSIIDRKSFQEIQKLRKVIEMMRGP-NTTFVVIGNKKDLSHLREVSKEEGKKWAEKHNALFFEISVAEDYHETQKVFNEIIRYIICQKAREESTTGKKRNHSYSS 238
            K+ + G  GVGKSAL+VRF T+RFI EYDPTLEST+R    I +  + +++ DTAG+ DT +RE    WG+ FVLVY I DR SF+E+  L+ +++ ++ P N T +++GNK DL H R+VS EEG+K A +    F+E S         ++F E+ R +     R     GK R  S ++
Sbjct:    8 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREV----RRRRMVQGKTRRRSSTT 184
The following BLAST results are available for this feature:
BLAST of TCONS_00069918-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RERG8.062e-4542.54Ras-related and estrogen-regulated growth inhibito... [more]
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