TCONS_00070028-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070028-protein
Unique NameTCONS_00070028-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length402

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070028-protein ID=TCONS_00070028-protein|Name=TCONS_00070028-protein|organism=Clytia hemisphaerica|type=polypeptide|length=402bp
LTLSSLEDKMSSLVFLFILVVFTLDLLEGSPPKHGYQYKVKSLDQCISHD
FSPIGCMKQSDHDRKKSDLILTGRDPHSPSYNDKEHAHVNDGLWTDYDEW
LPNFICQCANELYQKYPNSQSHIIGIGYYAECWSISKQNFERLLKEKGVK
AFSHQCVKTDFKKFFPLRPKIEKCGSFSGKDDTMFVYKVAKQQDSCKQFY
VQKGCKKIENDTTGKSPKPKGLQKVIVLDKNDKKLFCTCSKEAIKSGHRY
FSVNRQGKCFLWDSSVMELEPSEKCYDSASKQCPKYRSSCKSSPHCSGLT
SLDHQIYEAVQGPFACEKNPCKNKGVCSSNRLFSFKCKCPKGISGDRCQI
GINCFYTTHTIYKHTEAYICKKNKHNAKYSSKLGTFIILTFSLAQTIISA
SF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043597XLOC_043597Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070028TCONS_00070028Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR013032EGF-like_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 315..349
e-value: 5.4E-4
score: 29.3
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 312..349
score: 16.152
NoneNo IPR availableGENE3D2.10.25.10coord: 306..353
e-value: 5.8E-10
score: 38.5
NoneNo IPR availableCDDcd00054EGF_CAcoord: 317..349
e-value: 8.68874E-4
score: 35.6902
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 315..359
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 337..348

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070028-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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