TCONS_00070072-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070072-protein
Unique NameTCONS_00070072-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length109

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070072-protein ID=TCONS_00070072-protein|Name=TCONS_00070072-protein|organism=Clytia hemisphaerica|type=polypeptide|length=109bp
QCGICLTSMKGDGPQRPFVLHCGPVFCKSCITLWFDQWCHCPACKSPGRR
TTPLYVDTSFLEAIERMTATIKQLMKEKEQLEIQIEELFMQIVCLDADKE
ELEKKQMKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043630XLOC_043630Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070072TCONS_00070072Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..105
NoneNo IPR availableGENE3D1.10.287.510coord: 49..109
e-value: 3.3E-4
score: 20.4
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 2..66
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 1..45
e-value: 6.0E-7
score: 29.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 2..45
score: 10.66
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 1..47
e-value: 0.00419495
score: 30.4916
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..48
e-value: 2.2E-10
score: 39.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070072-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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