TCONS_00070081-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070081-protein
Unique NameTCONS_00070081-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1136

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070081-protein ID=TCONS_00070081-protein|Name=TCONS_00070081-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1136bp
MSNIRPEENCIKTLDEKLEMDQLLKLFTIFPTEEDLLYEALEEHQKIFEG
LRYRAIISDEQYESLLPYSRLTDFSQFDYHVLHLLIYKFTDLKKPETGWE
SEPLDEDQSESACYVRVYLARKAISLIKPPVSYAVYHGIFNYARQPLLDL
GNEKRSLTCLSVPKKFGATQPHQHYVGRKDEIAEIDDYLHKPVTPDAPRK
AVIVHGPNGIGKRELVRMYIRLKGYRYGDNIIWLDSSTNHNLQKSIRTLC
QTLSLSIADAHGDVMDSVALMESVHEYFLNSTVLFIFENVQSMKQIASLI
SSNELSYTIITTTKIFCARRFNHTSVSKLPLTTAEDYLKRALPIGDPFQT
VSLRKHLAKSLRFNPLALSLATAFITHSQTSTWDYIYAVKTVVKEHMPRR
VVNKKDRILTSNYTAFYLTCNALAEKSLSVFILKILSYLNNSSIDATLVE
EILKHCEMHANMSNFNQALDFLVKLSLIQITEGSGKDETKQILIHSSIQE
VNRIYQMEYSTNKLRPFHCILDYIFKFSGFHQQRHLDCGQTWLDHLMYIF
EAKSVHSHFLLKCKQNQDFLLDVFSSKGLCHDLLPIYKKLENICEKRSKD
RFNIKIMIAKCFQNLGQLGLALSEFEDIEYRLIKNFGEDDPLSIETRFLK
TSLIYKQQRYTTALELCNGILTQMTKLKMDNPELRLQIQYLVLKCKNKSG
EKTTELSELESIEKEKSNVFQENHPCVFRIQYDIGKHLLKAGYVPKAIAK
FRTLESVQLKILGEKHKSVLKTKTKLSECFNRLHDYEQSLPYLDYIRNSH
KQLYGPEHIIALHSERAYVECLQNTCRHDEAYDVLSRIETVQQNHHGSYK
IDDIISTKQNVANTLQVMGYYPEALDKYQDMLQMQRAYYEDDTHPEILKT
KHSFANCIHELGYLEEATKLFKEIELEQIKKLGENHQDVLRTQNNLSVCL
IDSCQEKKAFKELKEVEEKQKSTLTTHHPELLVTQTNMAVCLHKRQYFDR
AYKKYQDVLHYQKQHFGERSLVVLTLKHQIAICVHDQGNSMEALQKYDEV
YNAVSAYFGADHPETLRIRYNRAICYYDCKKYKRAFHELELVEDLQMDVL
GENHPDTLRTQTSLNICGRDVNNVLLGGPGNMCTIV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043636XLOC_043636Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070081TCONS_00070081Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011991WHTH_DNA-bd_dom
IPR011990TPR-like_helical_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 1024..1089
e-value: 1.4E-8
score: 34.8
NoneNo IPR availableGENE3D3.40.50.300coord: 161..316
e-value: 3.5E-13
score: 49.1
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 1040..1121
e-value: 1.8E-13
score: 50.1
coord: 787..868
e-value: 0.08
score: 12.7
coord: 704..786
e-value: 2.6E-4
score: 20.7
coord: 869..957
e-value: 2.1E-12
score: 46.6
coord: 958..1039
e-value: 4.6E-8
score: 32.7
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 331..703
e-value: 9.2E-4
score: 18.5
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 859..969
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 977..1109
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 722..845
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 169..388

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070081-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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