TCONS_00070122-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070122-protein
Unique NameTCONS_00070122-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length236

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070122-protein ID=TCONS_00070122-protein|Name=TCONS_00070122-protein|organism=Clytia hemisphaerica|type=polypeptide|length=236bp
MNITPASLNGFRSAAPHQNKGQLQVIFGPMFSGKTTELLRRIKRYEVAAY
SCLVIKYEHDKRYSDDGVATHDRQTFKAISCSRLQDVVNIAVKYEVIGVD
EGQFFPDVVEFCEKMAKLKKTVIVAALDGDFQRKAFGNILQLVPLAESVV
KLSAVCMNCYGEGSFTKRLSNDTTIEVIGGADKYMAACRDCHSQNLDIDT
LERQKEKVRQRRKPLLSMENISTGILFHHRTENASF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043656XLOC_043656Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070122TCONS_00070122Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001267Thymidine_kinase
IPR020633Thymidine_kinase_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0004797thymidine kinase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0004797 thymidine kinase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..211
NoneNo IPR availableGENE3D3.40.50.300coord: 20..152
e-value: 1.6E-44
score: 150.5
NoneNo IPR availableGENE3D3.30.60.20coord: 153..197
e-value: 2.6E-13
score: 49.7
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 154..194
IPR001267Thymidine kinasePFAMPF00265TKcoord: 21..192
e-value: 5.3E-68
score: 228.3
IPR001267Thymidine kinasePIRSFPIRSF035805Tdkcoord: 18..207
e-value: 1.1E-65
score: 218.6
IPR020633Thymidine kinase, conserved sitePROSITEPS00603TK_CELLULAR_TYPEcoord: 179..192
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 21..152

Blast
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BLAST of TCONS_00070122-protein vs. Swiss-Prot (Human)
Match: KITH (Thymidine kinase, cytosolic OS=Homo sapiens GN=TK1 PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 3.160e-79
Identity = 110/179 (61.45%), Postives = 135/179 (75.42%), Query Frame = 0 
Query:   14 AAPHQNKGQLQVIFGPMFSGKTTELLRRIKRYEVAAYSCLVIKYEHDKRYSDDGVATHDRQTFKAISCSRLQDVVNIAVKYEVIGVDEGQFFPDVVEFCEKMAKLKKTVIVAALDGDFQRKAFGNILQLVPLAESVVKLSAVCMNCYGEGSFTKRLSNDTTIEVIGGADKYMAACRDCH 192
             +P + +GQ+QVI GPMFSGK+TEL+RR++R+++A Y CLVIKY  D RYS     THDR T +A+    L+DV   A+   VIG+DEGQFFPD+VEFCE MA   KTVIVAALDG FQRK FG IL LVPLAESVVKL+AVCM C+ E ++TKRL  +  +EVIGGADKY + CR C+
Sbjct:   12 GSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEVIGGADKYHSVCRLCY 189
The following BLAST results are available for this feature:
BLAST of TCONS_00070122-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KITH3.160e-7961.45Thymidine kinase, cytosolic OS=Homo sapiens GN=TK1... [more]
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