TCONS_00070298-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070298-protein
Unique NameTCONS_00070298-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length776

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070298-protein ID=TCONS_00070298-protein|Name=TCONS_00070298-protein|organism=Clytia hemisphaerica|type=polypeptide|length=776bp
FPRLVFLELSNNPIRNIPAFAFKGIPSLKELVITTDTIVESSFDGLELES
LTLIGVKMETLPARFLDSSRDTLKALTVQNTEIEKLDILKFDFPNLETLI
LTGNRLTTFVFDGKTPNLKDVTLSKNKFKQIQCIQPLQNVTYLDVSYNQL
RNLTEDFSRCFSNLTDVKLQNNALSTLPIGFFSSLQNTLQSIDLSHNPWT
TLSTNELGLMLKLKELRLQNMGSIDIDLSPMENWEKAVAEKGLILDLSYN
TKLKSYQIPRNIKLDKLIFTNSELKTFPILNHKHGDIVHIEIQMNNLEKL
IIARPVAHLNASHNKIRFINISYEWTKIDILDVGHNLIESTRNIHIYPNT
YLKYVNLTFNKLKQINPFYQAPPDIRGKYGYKISPIRMDFSYNSISSINR
SAFFGLQPMVSLKLNNNNITSLPDDLLLQQPHLNKLDLNHNKLQQVPTEL
LRTIKLLSYLLLKDNQINQILPSDLQGLFRLLSLDLSSNYHLSKLPSNFL
SRNKRLRRFSIFNTSVVCTCNLTTIFKNIIMTNKRLKYDGHCLDESTSHL
QHLKTIVETSEANPWLCDTDCPILKCILHNECTQRINTSMSFNCSCQTLN
NNTDSNTIFNFPIFNNPPWIAPAKEPPFSRNLIFCQTTSCFSDTDLLSRN
GTNNSTRRTDPSFRHPESKCRWSLNKESNLQTGILVECSRIPLLTEIFCK
PFEFLSTTISPRSKNASFSQTTKVIIGLSVGALFLVGIFAYFGHKWKARR
SVTNKLADTYILTDFDYLNDISSIDG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043776XLOC_043776Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070298TCONS_00070298Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 431..453
e-value: 13.0
score: 12.3
coord: 137..160
e-value: 4.3
score: 16.2
coord: 93..113
e-value: 49.0
score: 7.6
coord: 1..24
e-value: 0.4
score: 19.7
coord: 161..184
e-value: 4.7
score: 15.9
coord: 478..502
e-value: 190.0
score: 2.8
coord: 454..477
e-value: 280.0
score: 1.3
coord: 406..429
e-value: 9.6
score: 13.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 94..150
e-value: 2.0E-6
score: 27.4
coord: 391..443
e-value: 4.5E-8
score: 32.6
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 327..348
score: 5.217
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 305..326
score: 4.716
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 456..477
score: 5.625
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 117..138
score: 6.357
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 95..116
score: 5.825
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 163..184
score: 5.34
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 480..502
score: 5.871
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 351..372
score: 5.818
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 139..160
score: 6.103
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 188..209
score: 5.656
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 3..24
score: 7.45
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 408..429
score: 6.896
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 432..453
score: 7.057
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 385..563
e-value: 2.1E-22
score: 78.7
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 1..78
e-value: 3.6E-9
score: 35.4
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 79..238
e-value: 4.9E-24
score: 83.9
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 243..376
e-value: 1.3E-5
score: 23.5
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 2..293
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 260..523

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070298-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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