TCONS_00070314-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00070314-protein
Unique Name	TCONS_00070314-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	519

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00070314-protein ID=TCONS_00070314-protein|Name=TCONS_00070314-protein|organism=Clytia hemisphaerica|type=polypeptide|length=519bp
MEHDEDPLLHQNDQEESERMTVDEILTKSGPFGRYQLGLLLICMFIFSNS
VSFQSLVTYYTADDPPWKCVDVNISSFCTKGPFQEGTKFFTKRCHLKRNQ
WEYTRPKTYSFTTEFDLVCSKEYLKALSTALFFIGGMIGAVLSGPLADAY
GRKPVIIGGFFAEFLAALAGYFVTAPWQYLVLRTVIGAGFGALTPTVYIY
LSESNSPKSRGWVGNIYFFGFTFSMMIVSMLAYYVPSWRKLVLYTSAFPL
LSFIGSWFLMESPHWLSSKEQFGKAEDVLKKMGKFNGKPLKVSLVRNREK
KKSNFSYVHLFNKWRVFVLTSLQCYLWFGIGLVFYAIALESSNLGGNLYT
NFILSSLADVPGYAITIFMSIYVGRKKVVVAGFSLSCLFLIAIGLTPETY
TMARVGMAISGRMGATLAFNTLFLWTFEIYPTVVRSKGMNICQMFSRLGS
AAAPFLTSVLQDIDPKLPYFIMAGFAVAGTILCLFLPEMLGKPTREEYKE
LFDENPTIQVTPPINEDEN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043790	XLOC_043790	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00070314	TCONS_00070314	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005828	MFS_sugar_transport-like
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 34..277 e-value: 3.3E-28 score: 97.9
None	No IPR available	GENE3D	1.20.1250.20		coord: 293..510 e-value: 2.7E-26 score: 91.6
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 81..499 e-value: 5.8E-38 score: 130.8
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 143..159
IPR005829	Sugar transporter, conserved site	PROSITE	PS00217	SUGAR_TRANSPORT_2	coord: 185..210
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 74..491 score: 24.436
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 126..487 e-value: 8.60481E-32 score: 123.578
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 125..495

Blast

[Close]

BLAST of TCONS_00070314-protein vs. Swiss-Prot (Human)
Match: S22A8 (Solute carrier family 22 member 8 OS=Homo sapiens GN=SLC22A8 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.856e-52
Identity = 150/530 (28.30%), Postives = 242/530 (45.66%), Query Frame = 0

Query:   20 MTVDEILTKSGPFGRYQLGLLLICMFIFSNSVSFQSLVTYYTADDPPWKCVDVNISSFCTKGPF--QEGTKFFTKRC-------------HLKR------NQWEYTRPKTYSFTTEFDLVCSKEYLKALSTALFFIGGMIGAVLSGPLADAYGRKPVIIGGFFAEFLAALAGYFVTAPWQYLVLRTVIGAGFGALTPTVYIYLSESNSPKSRGWVGNIYFFGFTFSMMIVSMLAYYVPSWRKLVLYTSAFPLLSFIGSWFLMESPHWLSSKEQFGKAEDVLKKMGKFNGKP----------LKVSLVRNREKKKSNFSYVHLFNKWRVFVLTSLQCYLWFGIGLVFYAIALESSNLGGNLYTNFILSSLADVPGYAITIFMSIYVGRKKVVVAGFSLSCLFLIAIGLTPETYTMARVGMAISGRMGATLAFNTLFLWTFEIYPTVVRSKGMNICQMFSRLGSAAAPFLTSVLQDIDPKLPYFIMAGFAVAGTILCLFLPEMLGKPTREEYKELFDENPTIQVTPPINEDE 518
            MT  EIL + G  G +Q   + I      N ++  +L+  +TA  P   C   + +S    GP+    G     +RC               +R      + W Y   K  S  TE+DLVC+   LK ++ ++F  G +IG ++ G L+D +GR+P++   +     +     F      Y+V R + G G   +T +  I   E    + R  +     + +TF   I+  LAY +P WR L L  S    + F+ SW+  ES  WL    +  KA  +L+++  FNGK           LK++L +     K+ ++   LF    +  +T      WF  G  +Y++A+     G NLY   I+    DVP   ITI    Y+GR     A   L+   ++A+   P      R  +A+ G+   + +F+ LFL+T E+YPTV+R  GM +  +++R+GS  +P L  +  ++ P +P  I    A+ G    LFLPE L +P  E  ++L  EN +++   P  E E
Sbjct:    1 MTFSEILDRVGSMGHFQFLHVAILGLPILN-MANHNLLQIFTAATPVHHCRPPHNAS---TGPWVLPMGPNGKPERCLRFVHPPNASLPNDTQRAMEPCLDGWVYNSTKD-SIVTEWDLVCNSNKLKEMAQSIFMAGILIGGLVLGDLSDRFGRRPILTCSYLLLAASGSGAAFSPTFPIYMVFRFLCGFGISGITLSTVILNVEWVPTRMRAIMSTALGYCYTFGQFILPGLAYAIPQWRWLQLTVSIPFFVFFLSSWWTPESIRWLVLSGKSSKALKILRRVAVFNGKKEEGERLSLEELKLNLQKEISLAKAKYTASDLFRIPMLRRMTFCLSLAWFATGFAYYSLAMGVEEFGVNLYILQIIFGGVDVPAKFITILSLSYLGRHTTQAAALLLAGGAILALTFVPLDLQTVRTVLAVFGKGCLSSSFSCLFLYTSELYPTVIRQTGMGVSNLWTRVGSMVSP-LVKITGEVQPFIPNIIYGITALLGGSAALFLPETLNQPLPETIEDL--ENWSLRAKKPKQEPE 522

The following BLAST results are available for this feature:

BLAST of TCONS_00070314-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00070314-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S22A8	5.856e-52	28.30	Solute carrier family 22 member 8 OS=Homo sapiens ...	[more]

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TCONS_00070314-protein (polypeptide) - C. hemisphaerica