TCONS_00070388-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070388-protein
Unique NameTCONS_00070388-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length273

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070388-protein ID=TCONS_00070388-protein|Name=TCONS_00070388-protein|organism=Clytia hemisphaerica|type=polypeptide|length=273bp
MSEKRRRARVQGGWASTSKPRRDEGPTKIANKDEKYPINFKFKPTVENRS
KPKELVIKKNGVHQLSDTDNGLSRIFLQNEFFDSNECEWIFEQLHAEVPW
KQELIKIKGETVEQPRHTAWFGDITYTYSGLTLNPHQFSPLLIMIRDKIE
SYMNEQQINRVPFNSMLANLYRGEKDSIDWHSDDEVSLQRNPVIASLSFG
ETRNFELRRKDQSEIIDGEVDYTYSQHVKVPLSNGSLLIMDGACQEDWQH
SVPKEYHDRQPRINLTFRTIYPS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043839XLOC_043839Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070388TCONS_00070388Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027450AlkB-like
IPR005123Oxoglu/Fe-dep_dioxygenase
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likeGENE3D2.60.120.590coord: 52..273
e-value: 2.1E-51
score: 174.1
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likePFAMPF135322OG-FeII_Oxy_2coord: 79..268
e-value: 2.8E-28
score: 99.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 71..272
IPR005123Oxoglutarate/iron-dependent dioxygenasePROSITEPS51471FE2OG_OXYcoord: 162..271
score: 12.76

Blast
[Close]
BLAST of TCONS_00070388-protein vs. Swiss-Prot (Human)
Match: ALKB3 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Homo sapiens GN=ALKBH3 PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 2.917e-84
Identity = 139/289 (48.10%), Postives = 183/289 (63.32%), Query Frame = 0 
Query:    1 MSEKRRRARVQGGWASTSKPRRDEGPTKIAN-----------KDEKYPIN---FKFK-PTVENRSKPKELVIKKNGVHQLSDTDNGLSRIFLQNEFFDSNECEWIFEQLHAEVPWKQELIKIKGETVEQPRHTAWFGDITYTYSGLTL--NPHQFSPLLIMIRDKIESYMNEQQINRVPFNSMLANLYRGEKDSIDWHSDDEVSLQRNPVIASLSFGETRNFELRRKDQSEIIDGEVDYTYSQHVKVPLSNGSLLIMDGACQEDWQHSVPKEYHDRQPRINLTFRTIYP 272
            M EKRRRARVQG WA+  K +    P   A            K++++ ++   F FK P    R  P+  VI + GV+++S +  G+SR+ L   F D  E +WI EQL  +VPWKQ     +  T +QPR TAW+G++ YTYS +T+  NPH + P+L  ++++IE            FNS+L NLYR EKDS+DWHSDDE SL R P+IASLSFG TR FE+R+K   E      DYTY + VK+PL +G+LLIM+GA Q DWQH VPKEYH R+PR+NLTFRT+YP
Sbjct:    1 MEEKRRRARVQGAWAAPVKSQAIAQPATTAKSHLHQKPGQTWKNKEHHLSDREFVFKEPQQVVRRAPEPRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPH-WHPVLRTLKNRIEENTGHT------FNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPE---ENGDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYP 279
The following BLAST results are available for this feature:
BLAST of TCONS_00070388-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALKB32.917e-8448.10Alpha-ketoglutarate-dependent dioxygenase alkB hom... [more]
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