TCONS_00070419-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070419-protein
Unique NameTCONS_00070419-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length333

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070419-protein ID=TCONS_00070419-protein|Name=TCONS_00070419-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
MLNNSLLGGSITTRRIVKESREKKKLAKALSSSESESKSKNKDKTVNKEK
KKKRRSLSFGLFSYKFSKQSNVESDQQETSYKSTRKSSNEHQHSKAKHYK
QHTTSYSNPTTPSDSRKTITSSNGASRSPKLTNKAYRNFNSSFEKAALFG
QPDTPPIQNETDYDPGYRPFPMRHQESTQSNISNRSIPTILINGEAWNGV
TDISGDEGDGSDESNPLASVGSNGIALTGTTECMAGGMGLREGFVDSENT
FFIETEEPFDNCLLKVEIRGPKQNPIKITTHLLDDNLCSFSYWPRRIGYY
MISVKWKGENIIGSPFDVGIMLRKTNGILHKRH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043858XLOC_043858Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070419TCONS_00070419Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001298Filamin/ABP280_rpt
IPR013783Ig-like_fold
IPR017868Filamin/ABP280_repeat-like
IPR014756Ig_E-set
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001298Filamin/ABP280 repeatSMARTSM00557flmn_3coord: 229..323
e-value: 8.3E-9
score: 45.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 224..324
e-value: 3.2E-16
score: 58.8
IPR017868Filamin/ABP280 repeat-likePFAMPF00630Filamincoord: 232..317
e-value: 2.1E-8
score: 34.8
IPR017868Filamin/ABP280 repeat-likePROSITEPS50194FILAMIN_REPEATcoord: 225..320
score: 20.726
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 231..320

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070419-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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