TCONS_00070436-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070436-protein
Unique NameTCONS_00070436-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length232

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070436-protein ID=TCONS_00070436-protein|Name=TCONS_00070436-protein|organism=Clytia hemisphaerica|type=polypeptide|length=232bp
MEAATQMLKRAVELDTSKKYSESKICYEEGIEMLLKTLTKMTDENAKKVI
RQKIDGYMKRAEELKKFVKKLKKDGKFHEKIEIENNQRGCSYGSLFSKFI
DDNLTVVEIKDAYIRSHHQILNLLRFCELLLRKAKNLNAINITTGSDENQ
PEEQAQKLKNLTTSLDSYRVTLSIKYEDTLHDREILFDNGWIIKIGRGLD
YFKRPNGPFSIGFCDMDLRQCHKTTIDIYDAR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043868XLOC_043868Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070436TCONS_00070436Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007330MIT
IPR032341MIT_C
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..74
NoneNo IPR availableGENE3D1.20.58.280coord: 1..74
e-value: 2.3E-15
score: 56.0
IPR007330MITSMARTSM00745smartcoord: 2..73
e-value: 6.3E-5
score: 32.4
IPR007330MITPFAMPF04212MITcoord: 2..66
e-value: 8.2E-16
score: 57.7
IPR007330MITSUPERFAMILY116846MIT domaincoord: 2..96
IPR032341MIT, C-terminal phospholipase D-like domainPFAMPF16565MIT_Ccoord: 89..229
e-value: 8.8E-54
score: 181.2

Blast
[Close]
BLAST of TCONS_00070436-protein vs. Swiss-Prot (Human)
Match: MITD1 (MIT domain-containing protein 1 OS=Homo sapiens GN=MITD1 PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.285e-79
Identity = 108/228 (47.37%), Postives = 164/228 (71.93%), Query Frame = 0 
Query:    3 AATQMLKRAVELDTSKKYSESKICYEEGIEMLLKTLTKMTDENAKKVIRQKIDGYMKRAEELKKFVKKLKKDGKFHEKIEIENNQRGCSYGSLFSKFIDDNLTVVEIKDAYIRSHHQILNLLRFCELLLRKAKNLNAINITTGSDEN-QPEEQAQKLKNLTTSLDSYRVTLSIKYEDTLHDREILFDNGWIIKIGRGLDYFKRPNGPFSIGFCDMDLRQCHKTTIDIY 229
            AA  +LKRAVELD+  +Y ++ +CY+EGI++LL+ L    D   +  +R+KI  YM RAE +KK++ + K+DGK+H++I+IE N  G SY SLF +++++ +T V I+D YIR  HQ+ N LRFCE+L+++   +  I++ T  DE  +  +Q++ L+ +  SL S+ V L ++Y  ++HDREI F+NGW+IKIGRGLDYFK+P   FS+G+CD DLR CH+TT+DI+
Sbjct:   14 AAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAENIKKYLDQEKEDGKYHKQIKIEENATGFSYESLFREYLNETVTEVWIEDPYIRHTHQLYNFLRFCEMLIKRPCKVKTIHLLTSLDEGIEQVQQSRGLQEIEESLRSHGVLLEVQYSSSIHDREIRFNNGWMIKIGRGLDYFKKPQSRFSLGYCDFDLRPCHETTVDIF 241
The following BLAST results are available for this feature:
BLAST of TCONS_00070436-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MITD16.285e-7947.37MIT domain-containing protein 1 OS=Homo sapiens GN... [more]
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