TCONS_00070437-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070437-protein
Unique NameTCONS_00070437-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length821

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070437-protein ID=TCONS_00070437-protein|Name=TCONS_00070437-protein|organism=Clytia hemisphaerica|type=polypeptide|length=821bp
MEELFGELESVSDSISNWSGLIDDDNKVKDFISKVCQLIDFIQEEEKPTE
KLKFLFSSCESLERCFGLISADQSWTVEIVCQCLAFFLFIFKFFEDCKNN
SAVNSIAEDLAKLFQTAYKHLKFVSVKLEHISETQWNKDRIQLNQAYKLL
VECSLVLRHLDIMACVPIWRQMKKIILRQPCTEIDDDNSFIVPSFFDSFI
LSIHAVEQWIDSFIQGDMEMARRSEKVSKFMMSLNLQILIVYKEKAGRDD
CKKVLNLLIKLKSSDIQLKQIPSNVDGTKVVEYFTAIIKPMMTEFIQMSD
APSSFNGFLEDITSGDSGNTTLSITPEILSVLASCENTHTIITWMDPDSQ
NHDHSILKMIMGKLLHEFEHSILFRGNALYEDLLVNMCFFVAMLSGEYFN
HLEETLLDNLLENESSLAALFVSDLWCFVNRWGSEELCWQHFQYLGRLLL
QYDSSSHVLQHTRISALLKRIFLFLPFSMHSKIATVFRTSKETIPIWSVI
CPWNFDEEGLQKEVATQICQSFLDVMTSGDDENFNDHEFADVTNCMVNLT
SSIENFNTHIEDEMKEKILEPVVDYWHCFEHAQEDIDMNEQLLVGMLHLI
MNLFSYLDQQTFLQMISCISKVVISIDSEAVQLQCCSTLAMLKNVNFPTQ
IKENCLQKLSLMFKHLITSSSWIVQTYAMKALKDYAEVTSYPKVLGTFLP
TKMKKDFAKFLKKKTHLEELSMLQLQERTFELLSIEPSTNQKTHKENCIT
NNEKIPNGLTDSKRMKIDSTEYLKGINNHLDNIEQEVTLLQQLQRQQNFQ
LTNDTRQRILNIVQNLKSIPG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043869XLOC_043869Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070437TCONS_00070437Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR027902DUF4487
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 773..796
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 20..701
e-value: 7.4E-6
score: 23.9
IPR027902Protein of unknown function DUF4487PFAMPF14868DUF4487coord: 378..692
e-value: 4.5E-39
score: 134.5
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 396..432
coord: 507..700

Blast
[Close]
BLAST of TCONS_00070437-protein vs. Swiss-Prot (Human)
Match: CA112 (Uncharacterized protein C1orf112 OS=Homo sapiens GN=C1orf112 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.138e-18
Identity = 86/351 (24.50%), Postives = 156/351 (44.44%), Query Frame = 0 
Query:  379 LYEDLLVNMCFFVAMLSGEYFNHLEETLLDNLLENESSLAALFVSDLWCFVNRWGSEELCWQHFQYLGRLLLQYDSSSHVLQHTRISALLKRIFLFLPFSMHSKIATVFRTSK-ETIPIWSVIC----PWNFDEEGLQK--EVATQICQSFLD-VMTSGDDENFNDHEFADVTNCMVNLTSSIENFNTHIEDEMKEKILEPVVDYWHCFEHAQ-EDIDMNEQLLVGMLHLIMNLFSYLDQQTFLQMISCISKVVISIDSEAVQLQCCSTLAMLKNVNFPTQIKENCLQKLSLMFKHLITSSSWIVQTYAMKALKDYAEVTSYPKVLGTFLPT-KMKKDFAKFLKKKTHLEE 719
            LY+ + V++C F+       F  L+  LL+ +L + + + +L   D WCF+ R+G+ ELC  H   +  L+          Q   +S LLKR+F F+      +    F   + E +P+W  I     P    E+ + +   V T  C+ +L    T G+ E+ N    A +  C     S+ E  +T      +  I+E V   W      Q  D    +Q    +L L+      LD +  LQ ++  + ++     + V+L     ++ L  +  P  I++  L  LS MF  L+   SW+++ + ++A   +AE T++ +++   L + + K     FL+K   ++E
Sbjct:  415 LYQHVCVHLCTFITSFHPSLFAELDAALLNAVL-SANMITSLLAMDAWCFLARYGTAELCAHHVTIVAHLI--KSCPGECYQLINLSILLKRLFFFMAPPHQLEFIQKFSPKEAENLPLWQHISFQALPPELREQTVHEVTTVGTAECRKWLSRSRTLGELESLNTVLSALLAVC----NSAGEALDT----GKQTAIIEVVSQLWAFLNIKQVADQPYVQQTFSLLLPLLGFFIQTLDPKLILQAVTLQTSLLKLELPDYVRLAMLDFVSSLGKLFIPEAIQDRILPNLSCMFALLLADRSWLLEQHTLEAFTQFAEGTNHEEIVPQCLSSEETKNKVVSFLEKTGFVDE 754
The following BLAST results are available for this feature:
BLAST of TCONS_00070437-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CA1126.138e-1824.50Uncharacterized protein C1orf112 OS=Homo sapiens G... [more]
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