Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00070450-protein ID=TCONS_00070450-protein|Name=TCONS_00070450-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1491bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00070450-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 1.686e-30 Identity = 104/329 (31.61%), Postives = 144/329 (43.77%), Query Frame = 0 Query: 1034 TDWTEWSTCTTTCGGGQTKRTRKCIIP------GSCNHLLEEHQLCNEDPCVVDGRWSDWSKFSECSVSCGNGTQFRTRTCFPP--LHGGLDCVGNDTDVQSCDTDKPCPAVLM---------VAEDCSKVCDDVDLACD--PEFFKGMNHLELASRLKI----NCATTTTFQNHTSHPSYDTSNETCLGFKNIGSYDCSIRAPGNGEKRVCG-------CISKDEITMG---PWSRWGECSTSCGVGNRTRSRDQVTSDDETETY---------TQLGTCSERPCPIDGEWGQWTAFGPCSVECGPNGYQVRTRQCNDPLPMHGGREC 1320 + W+ W C+ TCG G KR+R C P C E + C PC VDG WS+WS + EC+ SCG G Q RTRTC P HGG C GN ++ C+ +PCP +E C K C+ P F G +++++ NC + + S+ + +C G + CS P G ++ G C S T G PWS WG CS +C G R R T D+ + +Q+ C+ CP+DG WG W ++ CS CG G + R R C+ P+P+ GGR C Sbjct: 4533 SQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNI-RPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKW---ATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYR---TCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCG-GGEKTRKRLCDHPVPVKGGRPC 4853 HSP 2 Score: 130.568 bits (327), Expect = 5.038e-30 Identity = 116/398 (29.15%), Postives = 159/398 (39.95%), Query Frame = 0 Query: 1080 VDGRWSDWSKFSECSVSCGNGTQFRTRTCFPPL--HGGLDCVGNDTDVQSCDTDKPCP-----AVLMVAEDCSKVCDDVDLACDPEFFKGMNHLELASRLKINCATTTTFQNHTSHPSYDTSNETCLGFKNIGSYDCSIRA-PGNGEKRVCGCISKDEITMGPWSRWGECSTSCGVGNRTRSRDQVTSDDETETY---------TQLGTCSERPCPIDGEWGQWTAFGPCSVECGPNGYQVRTRQCNDPLPMHGGRECMSPET-----------------------------NEGAMNM--------------------SDIQDCDYNVVPSICPVHGGWSTWKPVSNCSMSCRPKNSTEKIYSSYARHCDSPAPEFGGNKCDGETIKKVECTGVKEC 1411 V G +S WS + CSV+CG G Q R+R C PL +GG C G+D ++++C +KPCP + + E+C++ C + N T T N PS C G + C+IR P +G W WG CS SCG G +TR+R ++ + TQ+ C+ER CPI G+W W ++ CSV CG G + RTR C+DP+P +GGR+C + N G M S IQ C+ + +CPV G W +W S CS SC T K R CD P P GG C G+T + C V+ C Sbjct: 4528 VHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQ-NKPCPVDGSWSEWSLWEECTRSCG-----------------------RGNQTRTRTCNN----PSVQHGGRPCEG-NAVEIIMCNIRPCPVHG-------------AWSAWQPWGTCSESCGKGTQTRAR---LCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCG-GGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTD----MCPVDGSWGSWHSWSQCSASCGGGEKTRK------RLCDHPVPVKGGRPCPGDTTQVTRCN-VQAC 4868 HSP 3 Score: 107.457 bits (267), Expect = 4.597e-23 Identity = 107/372 (28.76%), Postives = 153/372 (41.13%), Query Frame = 0 Query: 803 LTEWTDFSSCGGGCGINGTQNQTRECLRDGEPIANYAECISLGKMDESTEFLNVTWCYNENEPCAFWGNWSDWT--------------TESETCGN-YTETSQRDCLTDAIAATLSKSTVMLQLG--TLWQP--DSNHWCGIETFPSPSL--NPFSFEGGRYYGAVNYSSDTSERMRMVYTNTSC---FKWDKWKRDGECSVTCGEGVQKYTRDCLDGEGNAIDEVSCHELYDGYGFKGNLTGKCSFNFTCTDPV------TDWTEWSTCTTTCGGGQTKRTRKCIIP------GSCNHLLEEHQLCNEDPCVVDGRWSDWSKFSECSVSCGNGTQFRTRTC-FP-PLHGGLDCVGNDTDVQSCDTDKPCPA 1136 ++W+ + +C CG G Q ++R C +P+ GK + ++ L + C +N+PC G+WS+W+ T + TC N + R C +A+ + G + WQP + CG T L NP GG Y D +E V +C KW W CSV+CG G ++ TR C D YG + +F +DP + W+ W TC+ TC GGQ +R R C P +C + Q CN D C VDG W W +S+CS SCG G + R R C P P+ GG C G+ T V C+ + CP Sbjct: 4532 FSQWSAWRACSVTCG-KGIQKRSRLC---NQPLPANG-----GKPCQGSD-LEMRNC--QNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSY-------CDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDP-------------VPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNV-QACPG 4870 The following BLAST results are available for this feature:
BLAST of TCONS_00070450-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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