TCONS_00070450-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070450-protein
Unique NameTCONS_00070450-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1491

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070450-protein ID=TCONS_00070450-protein|Name=TCONS_00070450-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1491bp
MVKVSGFKMRDKPALMLAFLVYMSILVQRSTAVKRYELDCSKIYEVQTIG
VLEKDWAEGSSFATGSFFMLEPFRCGGKVISVNPPDLTIKNKMTSTDTEK
TYTFLNGVSSEELIFKNGDRLFPVGTLTMIGTPGQDLESADGQLQTEEDS
SFEIELRVVVGYTCSKWENDTFCYPPHIGSNVGVTISDRTCDAVVPPFKD
TVQIQTTPCNSTYEWKSWSDWSKCEPINATESLYGDGTRYRTAVDCQDEN
GEKVDDYWCGENATIYHLNSCYVFNETEYQYSDYFWSEMSECEIYRPELQ
GVPETNEQCGNGFQYSNQTYCTMGEYQEHPPQNESLCPPAGYIVKACYVP
CKGAGAVSSTLIDDPNQIKLHKPNSQENWTLYNFNEAYPDNKADDLHGFL
KFHPASDNEFDGTDKLVAEELLSKQVELQVYFSRFVKVKKFAINLYTMDN
FKWKLLLTTDQTKWWNITSEETRNPNSSPQNLLVVDDIQQIINGLKVELE
FDSTPTNELKAELNRIDYYNLGDWTEWGSWGDCSGNCRLENSTYERIRTC
SQGSDSKNCVGRFVEMDNCKCKEDFQWKAINTTFSPCNATKDECGPGWRY
KTADVCQYIIDGSSHPEELCGEKPIITQNCYHVCPALCTNEMASNTESNL
QINGSSTDIYQLTDYKEDIFVSRFGICSTNINPTSSSPSHMEIDAMIKVG
YFLPLFPNGDKDCEDESFVKVEGGFFKSNDPPIDGYKMPFCKAPQWGWVN
SSCSVSCGVGYLNSKAVCMGADGTTHPDHYCPFEEDLEPKILDCVNNVSC
YDLTEWTDFSSCGGGCGINGTQNQTRECLRDGEPIANYAECISLGKMDES
TEFLNVTWCYNENEPCAFWGNWSDWTTESETCGNYTETSQRDCLTDAIAA
TLSKSTVMLQLGTLWQPDSNHWCGIETFPSPSLNPFSFEGGRYYGAVNYS
SDTSERMRMVYTNTSCFKWDKWKRDGECSVTCGEGVQKYTRDCLDGEGNA
IDEVSCHELYDGYGFKGNLTGKCSFNFTCTDPVTDWTEWSTCTTTCGGGQ
TKRTRKCIIPGSCNHLLEEHQLCNEDPCVVDGRWSDWSKFSECSVSCGNG
TQFRTRTCFPPLHGGLDCVGNDTDVQSCDTDKPCPAVLMVAEDCSKVCDD
VDLACDPEFFKGMNHLELASRLKINCATTTTFQNHTSHPSYDTSNETCLG
FKNIGSYDCSIRAPGNGEKRVCGCISKDEITMGPWSRWGECSTSCGVGNR
TRSRDQVTSDDETETYTQLGTCSERPCPIDGEWGQWTAFGPCSVECGPNG
YQVRTRQCNDPLPMHGGRECMSPETNEGAMNMSDIQDCDYNVVPSICPVH
GGWSTWKPVSNCSMSCRPKNSTEKIYSSYARHCDSPAPEFGGNKCDGETI
KKVECTGVKECIPVDVTAAIKITDRDFTKELDDLQSEASLDIQNEIQKFV
NKVYEKELAKDKNYVKVVLHGFSDGTGVEAEEFGIKKKGKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043871XLOC_043871Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070450TCONS_00070450Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
IPR000082SEA_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 746..795
e-value: 7.3
score: 1.6
coord: 1283..1339
e-value: 5.8E-8
score: 42.4
coord: 1353..1412
e-value: 0.82
score: 10.1
coord: 1084..1135
e-value: 1.3E-14
score: 64.5
coord: 869..929
e-value: 7.5
score: 1.5
coord: 524..570
e-value: 0.42
score: 12.7
coord: 969..1030
e-value: 0.39
score: 13.0
coord: 803..867
e-value: 0.21
score: 15.4
coord: 1232..1278
e-value: 2.0E-5
score: 34.1
coord: 1033..1079
e-value: 3.1E-11
score: 53.3
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 1227..1278
e-value: 3.7E-6
score: 26.8
coord: 1079..1135
e-value: 4.0E-14
score: 52.3
coord: 799..857
e-value: 0.0027
score: 17.6
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 1285..1326
e-value: 9.5E-7
score: 28.8
coord: 1233..1277
e-value: 2.5E-5
score: 24.3
coord: 1085..1134
e-value: 7.7E-13
score: 48.3
coord: 973..993
e-value: 0.0075
score: 16.4
coord: 1035..1078
e-value: 9.0E-8
score: 32.1
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 741..798
e-value: 0.0019
score: 18.1
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 1279..1340
e-value: 1.0E-11
score: 44.4
coord: 965..1014
e-value: 2.7E-5
score: 23.9
coord: 1349..1411
e-value: 4.7E-6
score: 26.3
coord: 865..910
e-value: 0.047
score: 13.5
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 1031..1079
score: 11.379
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 1280..1348
score: 9.858
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 1229..1278
score: 10.153
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 1350..1412
score: 8.047
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 521..572
score: 8.638
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 1081..1135
score: 12.993
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 1276..1323
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 1232..1269
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 968..1008
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 1346..1406
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 523..569
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 1031..1078
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 1080..1129
IPR000082SEA domainPFAMPF01390SEAcoord: 1416..1478
e-value: 9.2E-6
score: 25.8
IPR000082SEA domainGENE3D3.30.70.960coord: 1417..1482
e-value: 6.4E-4
score: 19.3
NoneNo IPR availablePFAMPF15024Glyco_transf_18coord: 1142..1224
e-value: 2.8E-9
score: 36.1
NoneNo IPR availableGENE3D2.30.90.10coord: 214..266
e-value: 0.019
score: 15.0
coord: 523..569
e-value: 2.8E-4
score: 20.9
coord: 1032..1073
e-value: 6.5E-9
score: 35.7

Blast
BLAST of TCONS_00070450-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.686e-30
Identity = 104/329 (31.61%), Postives = 144/329 (43.77%), Query Frame = 0
Query: 1034 TDWTEWSTCTTTCGGGQTKRTRKCIIP------GSCNHLLEEHQLCNEDPCVVDGRWSDWSKFSECSVSCGNGTQFRTRTCFPP--LHGGLDCVGNDTDVQSCDTDKPCPAVLM---------VAEDCSKVCDDVDLACD--PEFFKGMNHLELASRLKI----NCATTTTFQNHTSHPSYDTSNETCLGFKNIGSYDCSIRAPGNGEKRVCG-------CISKDEITMG---PWSRWGECSTSCGVGNRTRSRDQVTSDDETETY---------TQLGTCSERPCPIDGEWGQWTAFGPCSVECGPNGYQVRTRQCNDPLPMHGGREC 1320
            + W+ W  C+ TCG G  KR+R C  P        C     E + C   PC VDG WS+WS + EC+ SCG G Q RTRTC  P   HGG  C GN  ++  C+  +PCP              +E C K        C+  P  F G       +++++    NC     +    +  S+   + +C G     +  CS   P  G ++  G       C S    T G   PWS WG CS +C  G   R R   T D+   +          +Q+  C+   CP+DG WG W ++  CS  CG  G + R R C+ P+P+ GGR C
Sbjct: 4533 SQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNI-RPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKW---ATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYR---TCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCG-GGEKTRKRLCDHPVPVKGGRPC 4853          

HSP 2 Score: 130.568 bits (327), Expect = 5.038e-30
Identity = 116/398 (29.15%), Postives = 159/398 (39.95%), Query Frame = 0
Query: 1080 VDGRWSDWSKFSECSVSCGNGTQFRTRTCFPPL--HGGLDCVGNDTDVQSCDTDKPCP-----AVLMVAEDCSKVCDDVDLACDPEFFKGMNHLELASRLKINCATTTTFQNHTSHPSYDTSNETCLGFKNIGSYDCSIRA-PGNGEKRVCGCISKDEITMGPWSRWGECSTSCGVGNRTRSRDQVTSDDETETY---------TQLGTCSERPCPIDGEWGQWTAFGPCSVECGPNGYQVRTRQCNDPLPMHGGRECMSPET-----------------------------NEGAMNM--------------------SDIQDCDYNVVPSICPVHGGWSTWKPVSNCSMSCRPKNSTEKIYSSYARHCDSPAPEFGGNKCDGETIKKVECTGVKEC 1411
            V G +S WS +  CSV+CG G Q R+R C  PL  +GG  C G+D ++++C  +KPCP     +   + E+C++ C                        + N   T T  N    PS       C G   +    C+IR  P +G                 W  WG CS SCG G +TR+R     ++    +         TQ+  C+ER CPI G+W  W ++  CSV CG  G + RTR C+DP+P +GGR+C   +                              N G M                      S IQ C+ +    +CPV G W +W   S CS SC     T K      R CD P P  GG  C G+T +   C  V+ C
Sbjct: 4528 VHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQ-NKPCPVDGSWSEWSLWEECTRSCG-----------------------RGNQTRTRTCNN----PSVQHGGRPCEG-NAVEIIMCNIRPCPVHG-------------AWSAWQPWGTCSESCGKGTQTRAR---LCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCG-GGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTD----MCPVDGSWGSWHSWSQCSASCGGGEKTRK------RLCDHPVPVKGGRPCPGDTTQVTRCN-VQAC 4868          

HSP 3 Score: 107.457 bits (267), Expect = 4.597e-23
Identity = 107/372 (28.76%), Postives = 153/372 (41.13%), Query Frame = 0
Query:  803 LTEWTDFSSCGGGCGINGTQNQTRECLRDGEPIANYAECISLGKMDESTEFLNVTWCYNENEPCAFWGNWSDWT--------------TESETCGN-YTETSQRDCLTDAIAATLSKSTVMLQLG--TLWQP--DSNHWCGIETFPSPSL--NPFSFEGGRYYGAVNYSSDTSERMRMVYTNTSC---FKWDKWKRDGECSVTCGEGVQKYTRDCLDGEGNAIDEVSCHELYDGYGFKGNLTGKCSFNFTCTDPV------TDWTEWSTCTTTCGGGQTKRTRKCIIP------GSCNHLLEEHQLCNEDPCVVDGRWSDWSKFSECSVSCGNGTQFRTRTC-FP-PLHGGLDCVGNDTDVQSCDTDKPCPA 1136
             ++W+ + +C   CG  G Q ++R C    +P+         GK  + ++ L +  C  +N+PC   G+WS+W+              T + TC N   +   R C  +A+   +         G  + WQP    +  CG  T     L  NP    GG Y        D +E    V    +C    KW  W     CSV+CG G ++ TR C D                 YG +         +F  +DP       + W+ W TC+ TC GGQ +R R C  P       +C     + Q CN D C VDG W  W  +S+CS SCG G + R R C  P P+ GG  C G+ T V  C+  + CP 
Sbjct: 4532 FSQWSAWRACSVTCG-KGIQKRSRLC---NQPLPANG-----GKPCQGSD-LEMRNC--QNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSY-------CDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDP-------------VPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNV-QACPG 4870          
The following BLAST results are available for this feature:
BLAST of TCONS_00070450-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN11.686e-3031.61Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
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