TCONS_00070461-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070461-protein
Unique NameTCONS_00070461-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length547

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070461-protein ID=TCONS_00070461-protein|Name=TCONS_00070461-protein|organism=Clytia hemisphaerica|type=polypeptide|length=547bp
MNTFQLYLILRNGVTYGQFYHRALDTNDITVATSNICFGQVGIARDIFST
ERPGHNVGSFPYGTENIRFLLNDYPQQVEYYSNEGGSNTDLGSWVYRLSA
AQHRQVESKFDFCEHDTDNIKCTWRQAAIECIEEDCKKVQGGNGFFLTGG
RRRRRSLSTEELQSRSDRFCEYRDDGEFVFPLDCRGYFICDGGKVSFASC
PEGQHFHPKLRTCVVESQYSCLSRMPIQKDMRSTDISTISVSVDNPMETI
KTLSKLWTLNLRIKPKAITYTNDTSVFYAVYNAPFFLPTQYQTPSILMER
GSTKLKVCGSFNYPSPSTCQTIPTPLPLNKFTRVQIQQIPNGADSKFIVK
YNGVNQYVGTPTNLQVLNDVKVYPRDPSMAPANAETKYYKFNSGIRPGHV
IETLPKLYNTWDLTLSFTPLGAKTGDTNILHATQYFDSHVQGVLKIDFMD
GTTRLRICSPSITFGSSNCVRLFRPFEVNKLVTINIQRSLNRFTITVREP
QYFVIRFNDPASRLMDDVNVYVSDYWMPSANAVLEAYQFQTPLPIAN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043875XLOC_043875Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070461TCONS_00070461Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 168..223
e-value: 5.8E-8
score: 42.5
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 170..221
e-value: 3.6E-10
score: 39.7
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 159..234
e-value: 2.1E-10
score: 39.8
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 167..223
score: 12.518
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 164..225

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070461-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top