TCONS_00070530-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070530-protein
Unique NameTCONS_00070530-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length927

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070530-protein ID=TCONS_00070530-protein|Name=TCONS_00070530-protein|organism=Clytia hemisphaerica|type=polypeptide|length=927bp
ERFRYRKEEISNYQTNISKKYNMASIAITAVLLQLLIIRVWCIPDLIKKS
PNGDSEAQYGKSLFDDRKYNDNDPTKEFVTDQLSISIKKAGINWNGFKFF
GLDFNQPDQIGGDVKIHFNGFLTFGSESTKEATAGKCIRVGFESNFLAPY
WMRYFKGSVRVFELGKTGQAKTDRENIIKDLFKAGILANPSKKATSEARI
IVLTWLKMRSSGTYDPSLQKWGKGFKNTFQMFVILHAGETYIKYYYRSLD
TNKIFVGGIVPCYGRIGISRYRQNVDPKSCKLERNSFGIDNLSGKLNKIP
QKIEYYSNEGNDGDMGSWSFRVSPKQCKQKLDVGEYCTKRDKTHFKCDYR
QKAIGCLEVEEGGGRCVLKKSPGRGRRSLSSAQIQKNVDRFCEFRDDGDF
VFPLKCRIYINCFEGKASFASCADGERFHPELRKCVKAADVDCETPGLKT
QEVFQVKTEIKRSKLREIIPIVHKFYSVTLDIKPKTPARGGWNSVFHATI
KSSWTYYGDRTPSIVMHKDTTKLQFCGPLNYPNPILCQSPAPPIPLNKFT
KIKIQQIPNGDDSKFIVYINGKTVWTATPNYPTMFSNVKVYEGDPYFPAA
NIETKNYKFQSGITAGHVLETVKKLQNMWTLKLAIIPVKTQNGDTSILHA
TPYFDSRTVGELKIDFLDKTTRLRICVPSLSTSYTPYCITFPRSLPLSKL
AKIQIRRRPAVSGTDYIIHLNGEQKYKFNDPTPNKVDDVNMYLSDPFMAP
ANAVLEAYQFNNGVQKGHVIDEKSSLGPAWKLNLKITITNTQHTGWINIL
HAVNNGVSSDLLFYVFIQPRTTRPYICTALKQGGANLCTSTSSLSLNRPT
LIEIDHFQSSGKYYYQMTVGGQAVYLDASKRRPKPILNANPRTFENVVVY
ASSPYYNEPSDNVEISGYSLVQNVDRF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043902XLOC_043902Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070530TCONS_00070530Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 390..445
e-value: 1.5E-6
score: 37.7
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 382..455
e-value: 5.1E-8
score: 32.2
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 392..443
e-value: 5.9E-7
score: 29.5
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 389..445
score: 11.389
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 388..446
NoneNo IPR availableGENE3D2.60.120.560coord: 474..612
e-value: 0.0031
score: 16.9

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070530-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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