TCONS_00070976-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00070976-protein
Unique Name	TCONS_00070976-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	648

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00070976-protein ID=TCONS_00070976-protein|Name=TCONS_00070976-protein|organism=Clytia hemisphaerica|type=polypeptide|length=648bp
MKEDGKSEENLFSKDVNVLYKEFDQRKCTLHISISLTINSSNHRKELYVR
LTNPNDLLFLHSMTLGEEDFLNLKKQQGLLVDFAAFPQKFIELLELCINE
QTNNVPRFLLNLTTNSSLNNSSTFDVVETNPFKHLVHLSLKFLPGNDEEI
KRYLASCLKTLQEENTTVRQNLSSTENELSNRLSCTQQLLNEKTKELDQL
RGESEQRINNATSSLQRDLNEAQLKFEQCQRRNEEQFENERKNNDSRYNK
MMSDLEQKLRTTQASNKELVDQKYRFEGLIRDLKSRLQNLEEEKEVTNKD
LSKLRRQNTNLDTDRHERDKTLNHLRTRVAVLEQELKDKQQVILRTNELM
ENSSENKRRMEFDLEAKQNTIMKLEQTIKSVSAEVIKGNEIIQKLQTEMR
SLKQRVKMMNIVTTKQEKLIEEKDILLKENEEKISSLKQLEDQHQEEAKK
LKQSMEELSLKLNESQETLKNNENVISWLNKQLNEQTLQQPHKTFSTTSN
ISTNQNSRIQYQPMNNNLGNTKDFTKTNTSRPVGGGTNFQRNTATQQVPS
YRPILKKSHFDVPHGISPIVPMTTNNQSNARKPLRQQHQMSTPLLQSQNN
SNPVLENKYLSKPPQTISGEEENQDPSLQRKSKPFVLASAYFNENTAQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044113	XLOC_044113	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00070976	TCONS_00070976	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032396	SAS-6_N

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 420..475
None	No IPR available	COILS	Coil	Coil	coord: 212..239
None	No IPR available	COILS	Coil	Coil	coord: 392..412
None	No IPR available	COILS	Coil	Coil	coord: 158..178
None	No IPR available	COILS	Coil	Coil	coord: 183..210
None	No IPR available	COILS	Coil	Coil	coord: 357..384
None	No IPR available	COILS	Coil	Coil	coord: 322..349
None	No IPR available	COILS	Coil	Coil	coord: 252..307
None	No IPR available	GENE3D	1.20.120.330		coord: 330..490 e-value: 0.041 score: 13.0
None	No IPR available	GENE3D	1.20.5.170		coord: 235..329 e-value: 6.4E-5 score: 22.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 527..548
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 565..635
IPR032396	Spindle assembly abnormal protein 6, N-terminal	PFAM	PF16531	SAS-6_N	coord: 48..142 e-value: 6.0E-24 score: 84.3

Blast

[Close]

BLAST of TCONS_00070976-protein vs. Swiss-Prot (Human)
Match: SAS6 (Spindle assembly abnormal protein 6 homolog OS=Homo sapiens GN=SASS6 PE=1 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 4.427e-114
Identity = 252/672 (37.50%), Postives = 391/672 (58.18%), Query Frame = 0

Query:   16 VNVLYKEFDQRKCTLHISISL-TINSSNHRKELYVRLTNPNDLLFLHSMTLGEEDFLNLKKQQGLLVDFAAFPQKFIELLELCINEQTNNVPRFLLNLTTNSS-LNNSSTF-DVVETNPFKHLVHLSLKFLPGNDEEIKRYLASCLKTLQEENTTVRQNLSSTENELSNRLSCTQQLLNEKTKELDQLRGESEQRINNATSSLQRDLNEAQLKFEQCQRRNEEQFENERKNNDSRYNKMMSDLEQKLRTTQASNKELVDQKYRFEGLIRDLKSRLQNLEEEKEVTNKDLSKLRRQNTNLDTDRHERDKTLNHLRTRVAVLEQELKDKQQVILRTNELMENSSENKRRMEFDLEAKQNTIMKLEQTIKSVSAEVIKGNEIIQKLQTEMRSLKQRVKMMNIVTTKQEKLIEEKDILLKENEEKISSLKQLEDQHQEEAKKLKQSMEELSLKLNESQETLKNNENVISWLNKQLNEQTLQQ-----------PHKTFSTT--SNISTNQN---SRIQY------QPMNNNLGNTKDF----TKTNTSRPVGGGTNFQRNTATQQVPSYRPILKKSHFDVPHGISPIVPMTTNNQSNARKPLRQQHQMSTPLLQSQNNSNPVLENKYLSKPPQTI----------SGEEENQD---PSLQRKSKPFVL---ASAYF 642
            + V  K+ ++R+ ++ +SI L ++++  HRK+L +RLT+  D  FL+++ + EEDF +LK QQGLLVDF AFPQKFI+LL+ C  E    +PRFLL L + ++ L+NS  F +VVETNPFKHL HLSLK LPGND EIK++LA CLK  +EE  ++ Q+L    ++ + +L  T++ L EK +ELD+LR E        T+   ++L   + K  Q Q + ++Q E ++K+ +  + + +  L+ +L   +A+NK+L ++KY+ +  IR+LK++L  +EEE + T +++  LRR+N+ LD + HE++K +N L+T+VAVLEQE+KDK Q++LRT E  +   E K  +E + E  Q  + KLE TIKS+SAE++K NEII+KLQ ++++L  ++K+ N VT +QEKL+ EK+  L++ ++++  + Q     ++E  KL++ +E    KL ES++ LKNNE +I+WLNK+LNE  L +           P  + S T  S IS N N    R+ Y       P+++       F    +  NTS P G GT  Q N     +   +P    S  DV  G +  +P +T+                      +N  N  LE+KYL K   +I          S  +  +D    +L   SKP  L   +SAYF
Sbjct:   12 LQVKCKDCEERRVSIRMSIELQSVSNPVHRKDLVIRLTDDTDPFFLYNLVISEEDFQSLKFQQGLLVDFLAFPQKFIDLLQQCTQEHAKEIPRFLLQLVSPAAILDNSPAFLNVVETNPFKHLTHLSLKLLPGNDVEIKKFLAGCLKCSKEEKLSLMQSL----DDATKQLDFTRKTLAEKKQELDKLRNEWASHTAALTNKHSQELTNEKEKALQAQVQYQQQHEQQKKDLEILHQQNIHQLQNRLSELEAANKDLTERKYKGDSTIRELKAKLSGVEEELQRTKQEVLSLRRENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDKDQLVLRTKEAFDTIQEQKVVLEENGEKNQVQLGKLEATIKSLSAELLKANEIIKKLQGDLKTLMGKLKLKNTVTIQQEKLLAEKEEKLQKEQKELQDVGQSLRIKEQEVCKLQEQLEATVKKLEESKQLLKNNEKLITWLNKELNENQLVRKQDVLGPSTTPPAHSSSNTIRSGISPNLNVVDGRLTYPTCGIGYPVSSAFAFQNTFPHSISAKNTSHP-GSGTKVQFN-----LQFTKP--NASLGDVQSGATISMPCSTDK---------------------ENGENVGLESKYLKKREDSIPLRGLSQNLFSNSDHQRDGTLGALHTSSKPTALPSASSAYF 650

The following BLAST results are available for this feature:

BLAST of TCONS_00070976-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00070976-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SAS6	4.427e-114	37.50	Spindle assembly abnormal protein 6 homolog OS=Hom...	[more]

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TCONS_00070976-protein (polypeptide) - C. hemisphaerica