TCONS_00071474-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071474-protein
Unique NameTCONS_00071474-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length568

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071474-protein ID=TCONS_00071474-protein|Name=TCONS_00071474-protein|organism=Clytia hemisphaerica|type=polypeptide|length=568bp
MSVNLNKYKSDLVKAWEELRNPKSDNDWVIFGYDGQSSDLKVQSQGEDGI
VEMIDDFNGGKIQYGGARVIDPNTNLPKIVFINWQGEGVPANVKGKCANH
LRDITNLFRGAHVQINARCDDDVEEDVIMEKVKNASGANYSFHKEKPKAF
VPQGKIGSVYQRSRPDLDKAFQDKGKFWAQNEKDSKQQKQEEENRLKEEK
LKESQKRAERDRKDTEQRERLQKERAQSIDKERESQNSEAKRRAEEEKKR
YEAALKESQKDDDEFRRRSDSERRKRIAEANQLIKGRQGVKETFERPSPP
APAKKAAPPPRKAVIPPPVRQPSPEPTREPSPEPPREPTTPPNRDPTPPP
HRDPTPPPHREPTPPPHREPTPPPTYEPTPPPSYESVSEPSPPPSRQLPP
EPQPEPVPEPVVETLAPSAGGGITAKALFDYQAVDGTEISFDPGDLITNI
EKIDEGWWRGEAPDQSYGLFPANFVEEITAGGAAEVVAEPEPQPEPQPEP
QLEPAVTSQSRGVCARALYDYQAADDSEITFDPEDVITNIEKIDDGWWRG
EAPDGSYGLFPANYVEEI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044377XLOC_044377Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071474TCONS_00071474Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR002108ADF-H
IPR029006ADF-H/Gelsolin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003779actin binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005622 intracellular
molecular_function GO:0003779 actin binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..218
NoneNo IPR availableCOILSCoilCoilcoord: 237..268
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 330..351
score: 44.55
coord: 358..374
score: 40.0
coord: 294..310
score: 32.94
coord: 315..327
score: 46.15
NoneNo IPR availableGENE3D2.30.30.40coord: 449..515
e-value: 2.6E-15
score: 55.3
NoneNo IPR availableGENE3D2.30.30.40coord: 516..568
e-value: 1.3E-22
score: 78.6
NoneNo IPR availableGENE3D2.30.30.40coord: 397..448
e-value: 1.4E-14
score: 52.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 488..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..418
NoneNo IPR availableCDDcd11281ADF_drebrin_likecoord: 3..138
e-value: 7.85834E-67
score: 214.423
NoneNo IPR availableCDDcd11960SH3_Abp1_eucoord: 424..476
e-value: 2.70407E-29
score: 109.026
NoneNo IPR availableCDDcd11960SH3_Abp1_eucoord: 514..566
e-value: 4.31025E-33
score: 119.426
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 1..144
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 437..452
score: 30.76
coord: 544..553
score: 35.76
coord: 423..433
score: 40.93
coord: 556..568
score: 45.05
IPR001452SH3 domainSMARTSM00326SH3_2coord: 423..479
e-value: 1.2E-19
score: 81.3
coord: 513..568
e-value: 1.9E-17
score: 73.9
IPR001452SH3 domainPFAMPF14604SH3_9coord: 517..566
e-value: 6.0E-15
score: 54.7
coord: 427..476
e-value: 7.0E-15
score: 54.5
IPR001452SH3 domainPROSITEPS50002SH3coord: 420..480
score: 16.201
IPR001452SH3 domainPROSITEPS50002SH3coord: 510..568
score: 17.314
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 417..498
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 488..568
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 10..133
e-value: 1.6E-7
score: 41.0
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 13..131
e-value: 5.7E-16
score: 58.7
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 2..133
score: 25.117
IPR029006ADF-H/Gelsolin-like domainGENE3D3.40.20.10coord: 4..145
e-value: 6.1E-32
score: 109.7

Blast
[Close]
BLAST of TCONS_00071474-protein vs. Swiss-Prot (Human)
Match: DBNL (Drebrin-like protein OS=Homo sapiens GN=DBNL PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 3.375e-74
Identity = 175/494 (35.43%), Postives = 241/494 (48.79%), Query Frame = 0 
Query:    1 MSVNLNKYKSDLVKAWEELRNPKSDNDWVIFGYDGQSSDLKVQSQGEDGIVEMIDDFNGGKIQYGGARVIDPNTNLPKIVFINWQGEGVPANVKGKCANHLRDITNLFRGAHVQINARCDDDVEEDVIMEKVKNASGANYSFHKEKPKA--FVPQGKIGSVYQRSRPDLDKAFQDKGKFWAQNEKDSKQQKQEEENRLKEEKLKESQKRAERDRKDTEQRERLQKERAQSIDKERESQNSEAKRRA------EEEKKRY-----EAALKESQKDDDEFRRRSDSERRKRIAEANQLIKGRQGVKETFERPSPPAPAKKAAPPPRKAVIPPPVRQPSPEPTREPSPEPPREPTTPPNRDPTPPPHRDPTPPPHREPTPPPHREPTPPPTYEPTPPPSYESVSEPSPPPSRQLPPEPQPEPVPEPVVETLAPS---AGGGITAKALFDYQAVDGTEISFDPGDLITNIEKIDEGWWRGEAPDQSYGLFPANFVEEI 478
            M+ NL++    L +A+  +   KS  DW +F Y+G S+D++V   GE G+ EM+++ N GK+ Y   RV DPN+ LPK V INW GEGV    KG CA+H+  + +  +GAHV INAR ++DVE + IMEKV  ASGANYSFHKE  +     PQ  +GSVYQ++    +     K  FWA+ EK       EEENR  EEK     +RAE                          +  E +RR          ++RY     EA+ + + +   E   R+ +E+   +    ++ K ++    T    S P P K  +P  +K +      QP     REP+    R     P  +P P              TPP   +      YE   PP  E+  E         PP  Q +      ++        +G G+ A+AL+DYQA D TEISFDP +LIT IE IDEGWWRG  PD  +G+FPAN+VE I
Sbjct:    1 MAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSGKVMYAFCRVKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKVAKASGANYSFHKESGRFQDVGPQAPVGSVYQKTNAVSEIKRVGKDSFWAKAEK-------EEENRRLEEK-----RRAEE-----------------------AQRQLEQERRERELREAARREQRYQEQGGEASPQRTWEQQQEVVSRNRNEQESAV-HPREIFKQKERAMST-TSISSPQPGKLRSPFLQKQLT-----QPETHFGREPAAAISRPRADLPAEEPAP-------------STPPCLVQAEEEAVYE--EPPEQETFYEQ--------PPLVQQQGAGSEHIDHHIQGQGLSGQGLCARALYDYQAADDTEISFDPENLITGIEVIDEGWWRGYGPDGHFGMFPANYVELI 429

HSP 2 Score: 107.071 bits (266), Expect = 7.597e-25
Identity = 43/58 (74.14%), Postives = 52/58 (89.66%), Query Frame = 0 
Query:  511 RGVCARALYDYQAADDSEITFDPEDVITNIEKIDDGWWRGEAPDGSYGLFPANYVEEI 568
            +G+CARALYDYQAADD+EI+FDPE++IT IE ID+GWWRG  PDG +G+FPANYVE I
Sbjct:  372 QGLCARALYDYQAADDTEISFDPENLITGIEVIDEGWWRGYGPDGHFGMFPANYVELI 429
The following BLAST results are available for this feature:
BLAST of TCONS_00071474-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DBNL3.375e-7435.43Drebrin-like protein OS=Homo sapiens GN=DBNL PE=1 ... [more]
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