TCONS_00071623-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071623-protein
Unique NameTCONS_00071623-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length444

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071623-protein ID=TCONS_00071623-protein|Name=TCONS_00071623-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
GDCPIYCTCIDHDGGILVECVDQKIDSTILRNISKTLNSSLVTMLNFKNN
DMVNFNSEYFAGYTQLEIINIQQNKISHIPQNISSHIPSVKQVSLQTNEI
ANLNQEDFESWQNIEVLGLTDNMITSLHSGVFKYLVNLQQLFLDGNRITE
LKEGTFNGLSRIQRLYLSRNKIETIQSGLFTDLINIEVVTLESNKLTSLK
SETFVNIRTLILDSNELNVKNISDDTFVNVRIVSLTSNPALTTLRRTWFT
SSPRAVIFTENPLHCGCTMYGNLKAFNGTIFNDGKCQTPERMVENDLNTF
ISSNPLNCTVCDHQPCQHGSKCASTLNGNTYQCECTEGYLGKHCDVFGRK
GMVNKSDDSLSSGYIALIAVVFVVLIGLILILVYWKHRDINKHEKSEETP
KEEDKSKEKESPTREETPRNEGTPPQLETPISAVNEGYHESTVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044502XLOC_044502Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071623TCONS_00071623Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675L_dom-like
IPR001611Leu-rich_rpt
IPR013032EGF-like_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 310..345
e-value: 0.0032
score: 26.7
IPR000742EGF-like domainPFAMPF00008EGFcoord: 311..343
e-value: 1.2E-4
score: 22.2
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 307..345
score: 15.657
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 63..86
e-value: 33.0
score: 9.0
coord: 183..206
e-value: 7.0
score: 14.5
coord: 135..158
e-value: 1.9E-4
score: 30.8
coord: 159..182
e-value: 0.037
score: 23.2
coord: 111..134
e-value: 78.0
score: 6.0
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 3..151
e-value: 3.5E-22
score: 77.9
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 152..311
e-value: 6.7E-19
score: 67.3
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 16..228
NoneNo IPR availableGENE3D2.10.25.10coord: 312..346
e-value: 2.1E-7
score: 30.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 393..444
NoneNo IPR availableCDDcd00054EGF_CAcoord: 312..344
e-value: 2.5879E-5
score: 40.3126
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 304..346
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 137..196
e-value: 6.3E-13
score: 48.2
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 185..206
score: 5.602
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 113..134
score: 5.887
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 65..86
score: 6.572
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 137..158
score: 7.319
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 161..182
score: 6.11
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 333..344
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 333..344

Blast
[Close]
BLAST of TCONS_00071623-protein vs. Swiss-Prot (Human)
Match: CPN2 (Carboxypeptidase N subunit 2 OS=Homo sapiens GN=CPN2 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.304e-21
Identity = 94/346 (27.17%), Postives = 159/346 (45.95%), Query Frame = 0 
Query:   11 DHDGGILVECVDQKIDSTILRNISKTLNSSLVTM----LNFKNNDMVNFNSEYFAGYTQLEIINIQQNKISHIPQNISSHIPSVKQVSLQTNEIANLNQEDFESWQNIEVLGLTDNMITSLHSGVFKYLVNLQQLFLDGNRITELKEGTFNGLSRIQRLYLSRNKIETIQSGLFTDLINIEVVTLESNKLTSLKSETFVNIRTLI---LDSNELNVKNISDDTFV---NVRIVSLTSNPALTTLRRTWFTSSPRAVIFTENPLHCGCTMYGNLKAFNGTIFNDGKCQTPERMVENDLNTF------ISSNPLNCTVCDHQPCQHGSKCASTLNGNTYQCECTEGYL 340
            D  GG L    D ++  +   N+S  + S+L ++    LNF  N +       F     LE +++Q N++  +P+ +   +  +K ++L  N +A L +E F    +++ L L++N ++ L  GVF  L +LQ+LFLD N I+EL    F+ L  ++RL+L RN I  +   +F  L N+  ++L+ N L  L +  F +   L+   L  N+L  + +++ TF    N+R + L+ N A+T L    F      V      L+ G     NL A +  +F +        + +N L T        + N  N                  L+GN +QC+C   YL
Sbjct:   91 DAFGG-LPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNF--NMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQL--ETVAEGTFAHLSNLRSLMLSYN-AITHLPAGIFRDLEELV-----KLYLGSN---NLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNL----------------ALHGNPWQCDCHLAYL 406
The following BLAST results are available for this feature:
BLAST of TCONS_00071623-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CPN21.304e-2127.17Carboxypeptidase N subunit 2 OS=Homo sapiens GN=CP... [more]
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