TCONS_00071659-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00071659-protein
Unique Name	TCONS_00071659-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	368

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00071659-protein ID=TCONS_00071659-protein|Name=TCONS_00071659-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
MSSDVYSYCKLCQINHTQQRKHIYTKKHQKKLKWVLQKYGQKIKECRPYL
SNPVIQEGDFETDKNFWCHCCGNSFKKHVSDYVKTILYGGVIEHLATEEH
WANTETFFKENGADEKFKISFIVSEKDINLFKSKLEPLVDVYNHRAEKKT
KALAKEIETQEHARKLVLDSANVGSFASNNTESQYKTVKNKHSVVQNPTG
YHDGIRVWRAGIVKYKQGSNQLKPLKYPCRKIERLHKCTESSIYTVSADG
VGLTSITAKFDSRKGNIYTGATPPWLRDDHVEDKDQREAPSSSRIYGPSM
EDLIKNKEVKRKAKLNPNRVGANFDHTVSQKDSEWLPSFGRVWNNGARWK
SRHEYHNEQKGAKKPKKD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044522	XLOC_044522	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00071659	TCONS_00071659	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR028015	CCDC84

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 143..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..298
IPR028015	Coiled-coil domain-containing protein 84	PFAM	PF14968	CCDC84	coord: 8..360 e-value: 7.9E-77 score: 259.2

Blast

[Close]

BLAST of TCONS_00071659-protein vs. Swiss-Prot (Human)
Match: CCD84 (Coiled-coil domain-containing protein 84 OS=Homo sapiens GN=CCDC84 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.737e-44
Identity = 116/356 (32.58%), Postives = 176/356 (49.44%), Query Frame = 0

Query:    9 CKLCQINHTQQRKHIYTKKHQKKLKWVLQKYGQKIKECRPYLSNPVIQEGDFETDKNFWCHCCGNSFKKHVSDYVKTILYGGVIEHLATEEHWANTETFFKENGADEKFKISFIVSEKDINLFKSKLEPLVDVYNHRAEKKTKALAKEIETQEHARKLVLDSANVGSFASNNTESQYKTVKNKHSVVQNPTGYHDGIRVWRAGIVKYKQGSNQLKPLKYPCRKIERLHKCTESSIYTVSADGVGLTSITAKFDSRKGNIYTGATPPWLRDDHVEDKDQREAPSSSRIYGPSMEDLIKNKEVKRKAKLNPNRVGANFDHTVSQKDSEWLPSFGRVWNNGARWKSRHEYHNEQKGAKK 364
            C LC+      R H+Y++KHQ++LK  L++   +++  R  +    ++    E ++  WC CCG   ++H+S    T+LYGG++EHLA+ EH   T  F+ EN A+ + K  F+V+ +D   FK  +   +D Y  + +K  K +A +I   E +R+ V+ S           E Q          V +P       R W+    +      Q   L  P            +        G  LT I  +     GNI++GATPPW+  D        E  + ++  GPS E+ +K KE ++  KL P+RVGANFDH+ S+  + WLPSFGRVWNNG RW+SRH++  E    KK
Sbjct:    7 CPLCRQTFFCGRGHVYSRKHQRQLKEALERLLPQVEAARKAIRAAQVERYVPEHERCCWCLCCGCEVREHLSHGNLTVLYGGLLEHLASPEHKKATNKFWWENKAEVQMKEKFLVTPQDYARFKKSMVKGLDSYEEKEDKVIKEMAAQIREVEQSRQEVVRSV---------LEPQ---------AVPDPEEGSSAPRSWKGMNSQVASSLQQPSNLDLP-----------PAPELDWMETGPSLTFIGHQDIPGVGNIHSGATPPWMIQDE-------EYIAGNQEIGPSYEEFLKEKEKQKLKKLPPDRVGANFDHS-SRTSAGWLPSFGRVWNNGRRWQSRHQFKTEAAAMKK 325

The following BLAST results are available for this feature:

BLAST of TCONS_00071659-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00071659-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CCD84	3.737e-44	32.58	Coiled-coil domain-containing protein 84 OS=Homo s...	[more]

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TCONS_00071659-protein (polypeptide) - C. hemisphaerica