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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000049 ID=TCONS_00000049|Name=TCONS_00000049|organism=Clytia hemisphaerica|type=transcript|length=902bp
TTTCAGCTCACCCCATTACCAATATATGTTTCATTCACCTATCGCATAAT
CAACAGCATCTTCATGATGGACTGGTGGCTTTCCCTTTCACTGTCTGTTT
GGTGGTCGGTGAATTTCTATTACTCAAATGTAAGTCTtgtatgtttatat
tttttaggCCGGAATCGGTTTTTTCAACACAGTTGAACAGTCGTTTTTCG
TACTCTAAAGTCGGGGAAATAAGGGAGAAATAATAATCTGGAAAAAGCCG
TGAGATTAGTTTGGAAAAAACTATGCTAAAATAACGAAACAAAGTGTCAT
ATTCGACGTATTTGCAGTATCTGACACATCCTACAGCCTAGCATAGCCTT
TTCCTATCCCACAACGCGAAGCTGGTTTATAACGTTTTAcgtcttttgtt
ttttaattgaattgaCATCAGTTCCTTGAAACATAATACAATGACTTCAA
AAGTGATACCAATCTCCCCCGACgattatgtgtttttttttttgcgcagt
ttaaaataaattataaactTGGTTTTCGGGAAGGCACTGGCTAGGAGGGT
ATATTTGTAAAAAGTTACAGACGGGACAGTCTCAAACAAGAAAGTCATTT
CCGTTTGGTACAGGTAAAACTTAGTCTAAACTTTTGTAGTATGTTACACT
ATTTTCTACACAAAATGATACGGGAAGACCGGCATCGCTTTAGATTTTAG
AAGTTTTACCGATCTCCAAACTGGCAAGGTCGTTTTTCCGTTGATTTAGC
TAATTTTTGTTTCGTCTCGTTGTTCGATGTTGTTTTCAACATCTGTTCGC
ACGGTTGTAAAAAGTTCGGATATTTTTCAAGGCGAAAATTAATAATTGAC
GATCTTTTCATATCGGGAATGTTTTATCATGTGTCACATTTAAAAATATC
GG Run BLAST on NCBI transcript from alignment at sc0000001:1138292..1139193+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000049 ID=TCONS_00000049|Name=TCONS_00000049|organism=Clytia hemisphaerica|type=transcript|length=902bp|location=Sequence derived from alignment at sc0000001:1138292..1139193+ (Clytia hemisphaerica)
TTTCAGCTCACCCCATTACCAATATATGTTTCATTCACCTATCGCATAAT
CAACAGCATCTTCATGATGGACTGGTGGCTTTCCCTTTCACTGTCTGTTT
GGTGGTCGGTGAATTTCTATTACTCAAATGTAAGTCTtgtatgtttatat
tttttaggCCGGAATCGGTTTTTTCAACACAGTTGAACAGTCGTTTTTCG
TACTCTAAAGTCGGGGAAATAAGGGAGAAATAATAATCTGGAAAAAGCCG
TGAGATTAGTTTGGAAAAAACTATGCTAAAATAACGAAACAAAGTGTCAT
ATTCGACGTATTTGCAGTATCTGACACATCCTACAGCCTAGCATAGCCTT
TTCCTATCCCACAACGCGAAGCTGGTTTATAACGTTTTAcgtcttttgtt
ttttaattgaattgaCATCAGTTCCTTGAAACATAATACAATGACTTCAA
AAGTGATACCAATCTCCCCCGACgattatgtgtttttttttttgcgcagt
ttaaaataaattataaactTGGTTTTCGGGAAGGCACTGGCTAGGAGGGT
ATATTTGTAAAAAGTTACAGACGGGACAGTCTCAAACAAGAAAGTCATTT
CCGTTTGGTACAGGTAAAACTTAGTCTAAACTTTTGTAGTATGTTACACT
ATTTTCTACACAAAATGATACGGGAAGACCGGCATCGCTTTAGATTTTAG
AAGTTTTACCGATCTCCAAACTGGCAAGGTCGTTTTTCCGTTGATTTAGC
TAATTTTTGTTTCGTCTCGTTGTTCGATGTTGTTTTCAACATCTGTTCGC
ACGGTTGTAAAAAGTTCGGATATTTTTCAAGGCGAAAATTAATAATTGAC
GATCTTTTCATATCGGGAATGTTTTATCATGTGTCACATTTAAAAATATC
GG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000049-exon-sc0000001-1491911889:1138292..1139193 | TCONS_00000049-exon-sc0000001-1491911889:1138292..1139193 | Clytia hemisphaerica | exon |
| TCONS_00000049-exon-sc0000001-1510915933:1138292..1139193 | TCONS_00000049-exon-sc0000001-1510915933:1138292..1139193 | Clytia hemisphaerica | exon |
| TCONS_00000049-exon-sc0000001-1575043694:1138292..1139193 | TCONS_00000049-exon-sc0000001-1575043694:1138292..1139193 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:1138292..1139193 + |
Blast
The following BLAST results are available for this feature:
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