|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000149 ID=TCONS_00000149|Name=TCONS_00000149|organism=Clytia hemisphaerica|type=transcript|length=901bp
GATCTAAaatagaagagaaaaaaaaaacagcgaaaGGAAATAAGTACAAG
TAAAAGGCGCATAGGAATAAATAAGGGTGTCAGGGAGGGTGGGAGGCAAA
AATATTTGTGTTGAATGCATGAGATGATGAGGTGAACTGAATGACTGAAC
TCAAACGCTACAAGTCGGAGTCCATGGGACTGGGACGAGTAGGAGTGGGC
GTGCAGTTTTAGCCCGCCATATGATGCCGGGCGTTTGACTTGCTGATTGC
GGAATTAACATGAGCTAAAATTTAGCTCTAACCAaattttgctcgttctc
ctacgcagctcctattctagcagaCGCTCGCCACCTTTATGTTCTCGCCC
TCTGATATTATTAATTAACAAACTAGTTTGCTAATTTATTGCGAATCTAA
AGATTGAcattcttattttatttttcagatttacTCAAATTATGTTCATA
CAATCCAATAATGTAACCTAGAACCACTACAATCTCCTTTTGAACCTGAA
ATACCGTAGCTAAAGCGCCATTATGGATTCAACACTTGCTAACTGTTCTG
TTACTATCGATTTGCCTAGCAACGAACGCTCTTGGTATGTTTATATCTTA
GCTTCATTAGCCATTTATGTATCTGGTTTCATCtgcattctgattggtcg
aaTCTTTTGGaaagtcattaaaaaatggcaatTTAAATTACCGGAAGACG
AAAAAGATTCACGGAAGCCGATGGAAGAGTATAAAGCATGGTATTTGCAA
CTGAAAGAGTTCGCTGTCAATCTCGATACCGGTAAAAGTGTACTTGGAAA
ATGTCTGGTAAGaatcctttctttttaaaagttttacttttacataagtg
tccccgtttcatatcagacacatatttcatatcaggacagtgtcttgcta
t Run BLAST on NCBI transcript from alignment at sc0000001:240295..241195- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000149 ID=TCONS_00000149|Name=TCONS_00000149|organism=Clytia hemisphaerica|type=transcript|length=901bp|location=Sequence derived from alignment at sc0000001:240295..241195- (Clytia hemisphaerica)
GATCTAAAATAGAAGAGAAAAAAAAAACAGCGAAAGGAAATAAGTACAAG
TAAAAGGCGCATAGGAATAAATAAGGGTGTCAGGGAGGGTGGGAGGCAAA
AATATTTGTGTTGAATGCATGAGATGATGAGGTGAACTGAATGACTGAAC
TCAAACGCTACAAGTCGGAGTCCATGGGACTGGGACGAGTAGGAGTGGGC
GTGCAGTTTTAGCCCGCCATATGATGCCGGGCGTTTGACTTGCTGATTGC
GGAATTAACATGAGCTAAAATTTAGCTCTAACCAAATTTTGCTCGTTCTC
CTACGCAGCTCCTATTCTAGCAGACGCTCGCCACCTTTATGTTCTCGCCC
TCTGATATTATTAATTAACAAACTAGTTTGCTAATTTATTGCGAATCTAA
AGATTGACATTCTTATTTTATTTTTCAGATTTACTCAAATTATGTTCATA
CAATCCAATAATGTAACCTAGAACCACTACAATCTCCTTTTGAACCTGAA
ATACCGTAGCTAAAGCGCCATTATGGATTCAACACTTGCTAACTGTTCTG
TTACTATCGATTTGCCTAGCAACGAACGCTCTTGGTATGTTTATATCTTA
GCTTCATTAGCCATTTATGTATCTGGTTTCATCTGCATTCTGATTGGTCG
AATCTTTTGGAAAGTCATTAAAAAATGGCAATTTAAATTACCGGAAGACG
AAAAAGATTCACGGAAGCCGATGGAAGAGTATAAAGCATGGTATTTGCAA
CTGAAAGAGTTCGCTGTCAATCTCGATACCGGTAAAAGTGTACTTGGAAA
ATGTCTGGTAAGAATCCTTTCTTTTTAAAAGTTTTACTTTTACATAAGTG
TCCCCGTTTCATATCAGACACATATTTCATATCAGGACAGTGTCTTGCTA
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000149-exon-sc0000001-1575043694:240295..241195 | TCONS_00000149-exon-sc0000001-1575043694:240295..241195 | Clytia hemisphaerica | exon |
| TCONS_00000149-exon-sc0000001-1510915933:240295..241195 | TCONS_00000149-exon-sc0000001-1510915933:240295..241195 | Clytia hemisphaerica | exon |
| TCONS_00000149-exon-sc0000001-1491911889:240295..241195 | TCONS_00000149-exon-sc0000001-1491911889:240295..241195 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:240295..241195 - |
Blast
The following BLAST results are available for this feature:
|
