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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000511 ID=TCONS_00000511|Name=TCONS_00000511|organism=Clytia hemisphaerica|type=transcript|length=2042bp
CTTATTGCAGGTGTATTTAAAGGTTTCAAACAAGTGCATTTGACTGAAGt
ctgttaaccaatcaaattcaaGAAAGCTTTACAACCAGCCAatcagaatg
ttgaaaaagataACAAGCGAGCCAATCATATTTCTTTATGCCACCGTGTA
CATGATCAACTTGTCCATTCTGCCACAGTTggttcttcaaaaagtttgtt
tacaaaaacattatggaaattcaactctgtgtggtGAAAAATCTGGGTTG
GCAATCACACAAGAGATGAAGAAGGAAACGTCTCATTGGTGGTTCGCTAT
CCTTGCTTCATCTCAAATTCCCGCCATTTTTACCGTTCTCATCTGGGGAC
CAATCAGCGACGCGATCGGTCGGAAGAAAGCAATGTTGTTGATTCCAATA
ATGAGTATTTTGCAGAATATTGTTTTCCTGTTATGCTCCTATTATATCAA
TTCTTCGATCATTTATTTGTGTTTTGGAATGTTTTTGGCGTGTTTTTTTG
GAGAATTTCCAGGAGTACTAGCTTTATCCTGTGCATTCATTGCAGATGTT
ACAGCGGGTCTAAAAGCTAAATCTCGAGTCACTAGAATGGCGCTTATAGA
TTGTGCTGTTAATCTAGCTGGGCTACCTGCAGGGCTTTTCGCTGGTCAGC
TTTTAAAACATCTAGGATTCACAGCTGTCTTTGGACTTTCGATCGGAATC
AATCTGTTGTTGTTAGCTTACATCGTTTTTCTTTTACCCGACCCAAGAGC
ATTACAAAAGGTTCCCAAAGGCAAAGAGCTCAAAGAATCAACATCTTCGG
AAAACAAGAAACTTGTTCCTGCGTCAGCGACGAATGAAAGCATCTCAGAT
AACTCAAGCAATGTTTCCAGTAACATTGACAGAGTGCCCGACTCTTCAAA
CGATAGCTCCTCAGAGTCTGCAAGTGAATCGCCACCTCAGTTAGACAAGA
AACCAATCACTTGTGATCTCTTTAAACCGCACAAGCAAATCTACCTTGTT
TACAATCTATTATCGTGCAAAGAAAGGAGACATTTAATTCTACCACCCCT
GTTTGCATTCAGTTTTGTTATTTACGCTTTTATTGGAGAACTAACCATTA
CGTCATTATATCTCAAAAGTGATCCTCTAGCCTTCACTCCAGNTTATTGG
AGAACTAACCATTACGTCATTATATCTCAAAAGTGATCCACTAGCCTTCA
CTCCAGACTACATCGGATATTATTACGCCTCACAGGCTGTTATTCGTAGC
CTTGGAATTCTCCTGGTGACACAATTCGCTTATCGAGTTTTAAAAGCGTC
AGATGTTAACGTTTTATTATTTGGGATTGCTACACAAATTATGTGTTATG
TTCTTATCGGGTTTTCTCGGGATACGTTATCGGTATTCATGGCAAATATT
ATCGGTTTCGGTTTAACAGTCGCGCTATCGTTGTCTAGaagctatacatc
aaaacatgTACCACCGGAGCAAGTTGGTACCCTGATGGCGGCATTCGAAT
CTATCGACGCCCTATCATTTACGACAAACTTGATGTCGATTGAAGTTTAC
AATGCAACTCTAGATCGTTATTCAGGAGCTGTATTTCTCTTCTTAGCTGG
CTGCTCAAGCGTTGGTTTTTGTATAACGGTGgccaacaaaatttatttaa
agcGAATACGAAATGAACTGAACAGCGAAATGAATGAAGCtcttaatgaa
aattttagaactTCGGATGCTTGATATATATTTATTCTTAAACTTGACTT
TTTGTTTTAATCTGCatataatatttttgttttgtgaagCCTAAATTTGT
GATAATATTCTGATTTTTAATTTAGCTGTGATATTCGAATAGTTTATTCT
TATTGAAATGTGACGAATTGTCTGactaggctgagaatatagcctggaag
ccatcATACctctccaaaatcgaaatatccgaataaaaaatgtcattcta
ggtcgaactttaaattctgcaaAGCGCTAAAATACCCAGAATCGCTAGCA
TATTTTGACCTGAATTGTAGATCTTGACTAGATAGATTTCCA Run BLAST on NCBI protein sequence of TCONS_00000511-protein >TCONS_00000511-protein ID=TCONS_00000511-protein|Name=TCONS_00000511-protein|organism=Clytia hemisphaerica|type=polypeptide|length=362bp
MLKKITSEPIIFLYATVYMINLSILPQLVLQKVCLQKHYGNSTLCGEKSG
LAITQEMKKETSHWWFAILASSQIPAIFTVLIWGPISDAIGRKKAMLLIP
IMSILQNIVFLLCSYYINSSIIYLCFGMFLACFFGEFPGVLALSCAFIAD
VTAGLKAKSRVTRMALIDCAVNLAGLPAGLFAGQLLKHLGFTAVFGLSIG
INLLLLAYIVFLLPDPRALQKVPKGKELKESTSSENKKLVPASATNESIS
DNSSNVSSNIDRVPDSSNDSSSESASESPPQLDKKPITCDLFKPHKQIYL
VYNLLSCKERRHLILPPLFAFSFVIYAFIGELTITSLYLKSDPLAFTPXY
WRTNHYVIISQK Run BLAST on NCBI transcript from alignment at sc0000002:206887..210787- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000511 ID=TCONS_00000511|Name=TCONS_00000511|organism=Clytia hemisphaerica|type=transcript|length=3901bp|location=Sequence derived from alignment at sc0000002:206887..210787- (Clytia hemisphaerica)
CTTATTGCAGGTGTATTTAAAGGTTTCAAACAAGTGCATTTGACTGAAGT
CTGTTAACCAATCAAATTCAAGAAAGCTTTACAACCAGCCAATCAGAATG
TTGAAAAAGATAACAAGCGAGCCAATCATATTTCTTTATGCCACCGTGTA
CATGATCAACTTGTCCATTCTGCCACAGTTGGTTCTTCAAAAAGTTTGTT
TACAAAAACATTATGGAAATTCAACTCTGTGTGGTGAAAAATCTGGGTTG
GCAATCACACAAGAGATGAAGAAGGTAAAATTTCAACACATCTCAACTCA
TATTAGACTTAGACTGGCACGCCAGTCGGGCTGGAACGGTATCACGCGGG
AAAAGTGAGCGTAGGAGTTAGGTAAGCGTAAGAAGAAATTCATTTGTCGG
TGGCAAGGGCTGAAATCCCTTAATCAGCAGCCTCTCACCAAGTTTTGATC
GTTCTTCTACGCAGCTCCTATTCTAGCAAACGCCCGCTGCCTTTATGCTC
CCGCCCTCTGACATGATTAATTAACAGACTAGTTTGCTAGTCTAACTAGA
CTATACTCCTGGTGGGGGGGGGTACTTAGACAAAATTGGGTACGGGGACT
TGTTGCTGGTCAGGGTCCCTTTTCTAGGCTCTGAAGAAATCAGTAATAGA
GTCCCAAGTTTAATAGTTTTCAAGATTTGTACCTGACAGGGTCAACTTTT
GGTTATTTTGTATGATTTTCAAGGTGAAATTAGAGCATTTTTCAATTTTT
CGTCTCAGTAATTTTTGCAACTTTTCAGGTTCCCATATTTACCAAACATT
CATATCTTACAGGTTCTAGTTTTAAGCTCCAGAGGCATTCCCCGTCGGCC
GTCAAGGTCTTCCCCCGGGCTTATGCTATAGTCTAACACTTTGTCACCTT
CTGAAAAATAATATCCAAGGCGAAGAAAATTCGTGAACGGGTTTTGCTTT
CAAAGCGAGTTTAAAGCCGTAGAGTATGCAATGTTGATTAGTCCGAAAAG
GGCGTGCAGGTTGTACAGACAGGGACAGACAGAAACCTACCTAGGCAAAA
GCATAGGCTTTGCAGATATACTGCAAAGATCACGGCACAAAACCCACGTC
CGATCTTTTAATAAAATATAGAAAAATGACACAATCTTACGCATATCGAG
AATCTTCGCTAAAAATGAGTTTGCGAGTTTGAGGCTCAAATCAAATCTAT
CTATCAGGTTTATAAGTCTTGTGTGTTGAAATTTTGTTATTACATTTCAC
AATTTTATGATATTATTGAATTTTAGGAAACGTCTCATTGGTGGTTCGCT
ATCCTTGCTTCATCTCAAATTCCCGCCATTTTTACCGTTCTCATCTGGGG
ACCAATCAGCGACGCGATCGGTCGGAAGAAAGCAATGTTGTTGATTCCAA
TAATGAGTATTTTGCAGAATATTGTTTTCCTGTTATGCTCCTATTATATC
AATTCTTCGATCATTTATTTGTGTTTTGGAATGTTTTTGGCGTGTTTTTT
TGGAGAATTTCCAGGAGTACTAGCTTTATCCTGTGCATTCATTGCAGATG
TTACAGCGGGTCTAAAAGCTAAATCTCGAGTCACTAGAATGGCGCTTATA
GATTGTGCTGTTAATCTAGCTGGGTTACCTGCAGGGCTTTTCGCTGGTCA
GCTTTTAAAACATCTAGGATTCACAGCTGTCTTTGGACTTTCGATCGGAA
TCAATCTGTTGTTGTTAGCTTACATCANTATGCTATAGTCTAACACTTTG
TCACCTTCTGAAAAATAATATCCAAGGCGAAGAAAATTCGTGAACGGGTT
TTGCTTTCAAAGCGAGTTTAAAGCCGTAGAGTATGCAATGTTGATTAGTC
CGAAAAGGGCGTGCAGGTTGTACAGACAGGGACAGACAGAAACCTACCTA
GGCAAAAGCATAGGCTTTGCAGATATACTGCAAAGATCACGGCACAAAAC
CCACGTCCGATCTTTTAATAAAATATAGAAAAATGACACAATCTTGCGCA
TATCGAGAATCTTCGCTAAAAATGAGTTTGCGAGTTTGAGGCTCAAATCA
AATCTATCTATCAGGTTTATAAGTCTTGTGTGTTGAAATTTTGTTATTAC
ATTTCACAATTTTATGATATTATTGAATTTTAGGAAACGTCTCATTGGTG
GTTCGCTATCCTTGCTTCATCTCAAATTCCCGCCATTTTTACCGTTCTCA
TCTGGGGACCAATCAGCGACGCGATCGGTCGGAAGAAAGCAATGTTGTTG
ATTCCAATAATGAGTATTTTGCAGAATATTGTTTTCCTGTTATGCTCCTA
TTATATCAATTCTTCGATCATTTATTTGTGTTTTGGAATGTTTTTGGCGT
GTTTTTTTGGAGAATTTCCAGGAGTACTAGCTTTATCCTGTGCATTCATT
GCAGATGTTACAGCGGGTCTAAAAGCTAAATCTCGAGTCACTAGAATGGC
GCTTATAGATTGTGCTGTTAATCTAGCTGGGCTACCTGCAGGGCTTTTCG
CTGGTCAGCTTTTAAAACATCTAGGATTCACAGCTGTCTTTGGACTTTCG
ATCGGAATCAATCTGTTGTTGTTAGCTTACATCGTTTTTCTTTTACCCGA
CCCAAGAGCATTACAAAAGGTTCCCAAAGGCAAAGAGCTCAAAGAATCAA
CATCTTCGGAAAACAAGAAACTTGTTCCTGCGTCAGCGACGAATGAAAGC
ATCTCAGATAACTCAAGCAATGTTTCCAGTAACATTGACAGAGTGCCCGA
CTCTTCAAACGATAGCTCCTCAGAGTCTGCAAGTGAATCGCCACCTCAGT
TAGACAAGAAACCAATCACTTGTGATCTCTTTAAACCGCACAAGCAAATC
TACCTTGTTTACAATCTATTATCGTGCAAAGAAAGGAGACATTTAATTCT
ACCACCCCTGTTTGCATTCAGTTTTGTTATTTACGCTTTTATTGGAGAAC
TAACCATTACGTCATTATATCTCAAAAGTGATCCTCTAGCCTTCACTCCA
GNTTATTGGAGAACTAACCATTACGTCATTATATCTCAAAAGTGATCCAC
TAGCCTTCACTCCAGACTACATCGGATATTATTACGCCTCACAGGCTGTT
ATTCGTAGCCTTGGAATTCTCCTGGTGACACAATTCGCTTATCGAGTTTT
AAAAGCGTCAGATGTTAACGTTTTATTATTTGGGATTGCTACACAAATTA
TGTGTTATGTTCTTATCGGGTTTTCTCGGGATACGTTATCGGTATTCATG
GCAAATATTATCGGTTTCGGTTTAACAGTCGCGCTATCGTTGTCTAGAAG
CTATACATCAAAACATGTACCACCGGAGCAAGTTGGTACCCTGATGGCGG
CATTCGAATCTATCGACGCCCTATCATTTACGACAAACTTGATGTCGATT
GAAGTTTACAATGCAACTCTAGATCGTTATTCAGGAGCTGTATTTCTCTT
CTTAGCTGGCTGCTCAAGCGTTGGTTTTTGTATAACGGTGGCCAACAAAA
TTTATTTAAAGCGAATACGAAATGAACTGAACAGCGAAATGAATGAAGCT
CTTAATGAAAATTTTAGAACTTCGGATGCTTGATATATATTTATTCTTAA
ACTTGACTTTTTGTTTTAATCTGCATATAATATTTTTGTTTTGTGAAGCC
TAAATTTGTGATAATATTCTGATTTTTAATTTAGCTGTGATATTCGAATA
GTTTATTCTTATTGAAATGTGACGAATTGTCTGACTAGGCTGAGAATATA
GCCTGGAAGCCATCATACCTCTCCAAAATCGAAATATCCGAATAAAAAAT
GTCATTCTAGGTCGAACTTTAAATTCTGCAAAGCGCTAAAATACCCAGAA
TCGCTAGCATATTTTGACCTGAATTGTAGATCTTGACTAGATAGATTTCC
A Coding sequence (CDS) from alignment at sc0000002:206887..210787- >TCONS_00000511 ID=TCONS_00000511|Name=TCONS_00000511|organism=Clytia hemisphaerica|type=CDS|length=2178bp|location=Sequence derived from alignment at sc0000002:206887..210787- (Clytia hemisphaerica)
GAAACGTCTCATTGGTGGTTCGCTATCCTTGCTTCATCTCAAATTCCCGC
CATTTTTACCGTTCTCATCTGGGGACCAATCAGCGACGCGATCGGTCGGA
AGAAAGCAATGTTGTTGATTCCAATAATGAGTATTTTGCAGAATATTGTT
TTCCTGTTATGCTCCTATTATATCAATTCTTCGATCATTTATTTGTGTTT
TGGAATGTTTTTGGCGTGTTTTTTTGGAGAATTTCCAGGAGTACTAGCTT
TATCCTGTGCATTCATTGCAGATGTTACAGCGGGTCTAAAAGCTAAATCT
CGAGTCACTAGAATGGCGCTTATAGATTGTGCTGTTAATCTAGCTGGGCT
ACCTGCAGGGCTTTTCGCTGGTCAGCTTTTAAAACATCTAGGATTCACAG
CTGTCTTTGGACTTTCGATCGGAATCAATCTGTTGTTGTTAGCTTACATC
GTTTTTCTTTTACCCGACCCAAGAGCATTACAAAAGGTTCCCAAAGGCAA
AGAGCTCAAAGAATCAACATCTTCGGAAAACAAGAAACTTGTTCCTGCGT
CAGCGACGAATGAAAGCATCTCAGATAACTCAAGCAATGTTTCCAGTAAC
ATTGACAGAGTGCCCGACTCTTCAAACGATAGCTCCTCAGAGTCTGCAAG
TGAATCGCCACCTCAGTTAGACAAGAAACCAATCACTTGTGATCTCTTTA
AACCGCACAAGCAAATCTACCTTGTTTACAATCTATTATCGTGCAAAGAA
AGGAGACATTTAATTCTACCACCCCTGTTTGCATTCAGTTTTGTTATTTA
CGCTTTTATTGGAGAACTAACCATTACGTCATTATATCTCAAAAGTGATC
CTCTAGCCTTCACTCCAGNTTATTGGAGAACTAACCATTACGTCATTATA
TCTCAAAAGTGAATGTTGAAAAAGATAACAAGCGAGCCAATCATATTTCT
TTATGCCACCGTGTACATGATCAACTTGTCCATTCTGCCACAGTTGGTTC
TTCAAAAAGTTTGTTTACAAAAACATTATGGAAATTCAACTCTGTGTGGT
GAAAAATCTGGGTTGGCAATCACACAAGAGATGAAGAAGGAAACGTCTCA
TTGGTGGTTCGCTATCCTTGCTTCATCTCAAATTCCCGCCATTTTTACCG
TTCTCATCTGGGGACCAATCAGCGACGCGATCGGTCGGAAGAAAGCAATG
TTGTTGATTCCAATAATGAGTATTTTGCAGAATATTGTTTTCCTGTTATG
CTCCTATTATATCAATTCTTCGATCATTTATTTGTGTTTTGGAATGTTTT
TGGCGTGTTTTTTTGGAGAATTTCCAGGAGTACTAGCTTTATCCTGTGCA
TTCATTGCAGATGTTACAGCGGGTCTAAAAGCTAAATCTCGAGTCACTAG
AATGGCGCTTATAGATTGTGCTGTTAATCTAGCTGGGCTACCTGCAGGGC
TTTTCGCTGGTCAGCTTTTAAAACATCTAGGATTCACAGCTGTCTTTGGA
CTTTCGATCGGAATCAATCTGTTGTTGTTAGCTTACATCGTTTTTCTTTT
ACCCGACCCAAGAGCATTACAAAAGGTTCCCAAAGGCAAAGAGCTCAAAG
AATCAACATCTTCGGAAAACAAGAAACTTGTTCCTGCGTCAGCGACGAAT
GAAAGCATCTCAGATAACTCAAGCAATGTTTCCAGTAACATTGACAGAGT
GCCCGACTCTTCAAACGATAGCTCCTCAGAGTCTGCAAGTGAATCGCCAC
CTCAGTTAGACAAGAAACCAATCACTTGTGATCTCTTTAAACCGCACAAG
CAAATCTACCTTGTTTACAATCTATTATCGTGCAAAGAAAGGAGACATTT
AATTCTACCACCCCTGTTTGCATTCAGTTTTGTTATTTACGCTTTTATTG
GAGAACTAACCATTACGTCATTATATCTCAAAAGTGATCCTCTAGCCTTC
ACTCCAGNTTATTGGAGAACTAACCATTACGTCATTATATCTCAAAAGTG
AATGTTGAAAAAGATAACAAGCGAGCCAATCATATTTCTTTATGCCACCG
TGTACATGATCAACTTGTCCATTCTGCCACAGTTGGTTCTTCAAAAAGTT
TGTTTACAAAAACATTATGGAAATTCAACTCTGTGTGGTGAAAAATCTGG
GTTGGCAATCACACAAGAGATGAAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00000511-exon-sc0000002-1575043694:210514..210787 | TCONS_00000511-exon-sc0000002-1575043694:210514..210787 | Clytia hemisphaerica | exon |
| TCONS_00000511-exon-sc0000002-1575043694:206887..208654 | TCONS_00000511-exon-sc0000002-1575043694:206887..208654 | Clytia hemisphaerica | exon |
| TCONS_00000511-exon-sc0000002-1510915933:210514..210787 | TCONS_00000511-exon-sc0000002-1510915933:210514..210787 | Clytia hemisphaerica | exon |
| TCONS_00000511-exon-sc0000002-1510915933:206887..208654 | TCONS_00000511-exon-sc0000002-1510915933:206887..208654 | Clytia hemisphaerica | exon |
| TCONS_00000511-exon-sc0000002-1491911889:210514..210787 | TCONS_00000511-exon-sc0000002-1491911889:210514..210787 | Clytia hemisphaerica | exon |
| TCONS_00000511-exon-sc0000002-1491911889:206887..208654 | TCONS_00000511-exon-sc0000002-1491911889:206887..208654 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002 | supercontig | sc0000002:206887..210787 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055085 |
transmembrane transport |
| cellular_component |
GO:0016021 |
integral component of membrane |
Blast
The following BLAST results are available for this feature:
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