TCONS_00000531 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000531
Unique NameTCONS_00000531
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2549

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000531 ID=TCONS_00000531|Name=TCONS_00000531|organism=Clytia hemisphaerica|type=transcript|length=2549bp
CTTTTCAAAGCATGGTGTTGCCCTATAAAAAGGGGCTCGTTCGGACCTTG
ATTATCAAGCATCTCAATTAGTTTTACTTGAGATCTACTGGAAAACAACG
ATATCAAAGCAATGAagtttttgctactttttgcACTCCTCGGTGCCCTG
TTACACAACGCTCTAGGGGCTTGTGATATCTATCGCAATTTGGGATACGC
ATTAAGAGGCTACAATATCCGAACtgGTAATCCTTTTAACAACAATGGCG
ACCCAGGGTTTAAATCACAAATCTTTGTCGGTTACAAGACAGATAGTCAT
GGCAAAGTCTCTTTGAATAATGGTATTACTGCAGCTGGGCTGTCAACATG
TCGTCGTTCTATGACGTCAAAAGCATTCTCCAACTTGAAAGCTTACAGAA
ACTTTATGTCTGAATCGTCCACAAGTGGTTGGGATTTACAAGTCGGTACT
GAAACTAAAGTCACCGCTGGcgttaaaatcaaaaagtttattgAACTCAA
AGCTGAAAAGAAAATTCCCCCAGCATTTACACGTGTGTGGAGTGATTCCC
ATGGTATGAAAAAATTGGAAGATTTTTTCTCACAGAAGAAAGGAATGGCC
ACACTCACCCAAGGTGTTTGTACTATGTATGAAGTGGATTTGAACAGCTT
CCATTTACCACCGTTCAGAGCTTCCTTCAAGacTTCCTTATTAGAACTAT
ACAAAGGAGCTTCACTCAGTCACACACATAAAGTCGCACTTTTCCGCAAA
TTCATTAACGAGTATGGAACACATTTCCAAGTCAAAACACAACTTGGTGC
CATTTTTATGCATCAAACACTTTATTCAGAGGTTGCACGAAAACAATTTT
CTGCAGAAACTCTTCAAAGCTGTAATGATCGAACTGGTACACGTATTTTT
GGCATTCAAGTTGAAAAAGATAAAAGTGAATGTACATCGAGTGACCAACA
GAAATTGAATCAACTTGGTTCTGCGCATGNGAACTGGTACACGCATTTTT
GGCATTCAAGTTGAAAAAGATAAAAGTCAATGTACATCGAGTGACCAACA
GAAATTGAATCAACTTGGTTCTGCGCATGTTCAAGAATACATAATTACTA
AAGGATCTAGACCGACAGATATTAAAGACTGGGCCAAGCAATCATTCATC
CCAGTTCCCTTACGATTCCAACTATCACCAATCATCAATTTATTCACTTA
CGAACATCTCTCTGCTGCAAACATCATCCTGGATGGTAAACGAATCTACA
ACAGTTGGACGATCCGTAAATGGTTTGTACCGCTCTATTTCGAATATTGC
GAAACACTTGGCATTCAAGCATCATGTTTACCAAAGAAAGGATGTGGTTA
TGACGATTTGTGCCCTGTTGATACTGTTTGTACACCGGGTGGCACTACAC
ATGAATGTTCTCAATGGACACAATGGACTTGTTTCGAATCTTGCCGAAGC
AACCTCCAACTCAGACAACGAAGACAACGTACCTGCTCTGGCTGTTCTGG
TAAAACGTACGTAGAAAGATTCGTATCTGCTGGATCCTGCCCGCCTGTAC
CGCCCTGCTATAAGAGTTTCACAACCTCAGTACACCACACCAACTTTGAT
TTGGACGGACATGGTAATTCTGTATATCTTGATCGACATAATTTGGTATG
TCCAGCTGGTAAAGCGTTGAGTGGCTTCAAATTGCAAAGAAATGATTTAC
ATAATAAAATCAGATATGAATATTACTGCAGTACAATACAATATCCTTGT
GCAGCCAATTACTACAAGAACACTCTCAAGAAAGACAACGGACACGGCAA
CTTAGTTTACCTGGACCGTTTAGATGTCAAATGTAACGGCAATGATTTGA
TGACAAGTCAACGATATCTACGAGCAGGACGAGAAAGTTGGTATCATTAT
GGATGTTGTAGAATACAATACACTCATCAACAGAGATGTCATTACCATTA
TACACCGAAAAGTCCGCATAACGGCCCTGGTCATGTTATCTACCTGGATC
GACAATATTTCAACAGATGTCCAAATAATCATGTGATTTCATCTTTCCAT
TTGATAAGGGCCGATCATACCCATATTCGTTATAAACTTAAATGTTGTAA
GGTAGAGCCTNCTTGGCATAACGGTCCTGGCCATGTCATCTACCTGGATC
GACAATCTCACAACAAATGTCCAAATAATCATGTGATTTCATCTTTCCAT
TTGATGAGGGCCGATCATACCCATATTCGTTATAAACTTAAATGTTGTAA
GGTAGAGCCTCTCAGTGGCTGATTTGCCTTTGGAGCCAAATACCTCATTT
AACAATATTGACTATTATAAGCAACTCAACATTTTTTGTATCAATATTAC
CAACTCATGTGCTAAAGATATTTATTCGCATTTATTGACTGTACAATTAT
AAgtaatttgtcatttttgtatGAATATTAACAACTCCTCTGCTCTAAGG
TGTATATTGTTATTGGTGCTTAAGTATTGTTAGTTCTAGCTAAAGATTTC
ATTAGAAGTATTGACTATCATAACTGATCATAAgcaatttattattttt
Run BLAST on NCBI

protein sequence of TCONS_00000531-protein

>TCONS_00000531-protein ID=TCONS_00000531-protein|Name=TCONS_00000531-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
MXTGTRIFGIQVEKDKSQCTSSDQQKLNQLGSAHVQEYIITKGSRPTDIK
DWAKQSFIPVPLRFQLSPIINLFTYEHLSAANIILDGKRIYNSWTIRKWF
VPLYFEYCETLGIQASCLPKKGCGYDDLCPVDTVCTPGGTTHECSQWTQW
TCFESCRSNLQLRQRRQRTCSGCSGKTYVERFVSAGSCPPVPPCYKSFTT
SVHHTNFDLDGHGNSVYLDRHNLVCPAGKALSGFKLQRNDLHNKIRYEYY
CSTIQYPCAANYYKNTLKKDNGHGNLVYLDRLDVKCNGNDLMTSQRYLRA
GRESWYHYGCCRIQYTHQQRCHYHYTPKSPHNGPGHVIYLDRQYFNRCPN
NHVISSFHLIRADHTHIRYKLKCCKVEPXWHNGPGHVIYLDRQSHNKCPN
NHVISSFHLMRADHTHIRYKLKCCKVEPLSG
Run BLAST on NCBI

transcript from alignment at sc0000002:391902..399310-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000531 ID=TCONS_00000531|Name=TCONS_00000531|organism=Clytia hemisphaerica|type=transcript|length=7409bp|location=Sequence derived from alignment at sc0000002:391902..399310- (Clytia hemisphaerica)
CTTTTCAAAGCATGGTGTTGCCCTATAAAAAGGGGCTCGTTCGGACCTTG
ATTATCAAGCATCTCAATTAGTTTTACTTGAGATCTACTGGAAAACAACG
ATATCAAAGCAATGAAGTTTTTGCTACTTTTTGCACTCCTCGGTGCCCTG
TTACACAACGCTCTAGGGGCTTGTGATATCTATCGCAATTTGGGATACGC
ATTAAGAGGCTACAATATCCGAACTGGTAAGAATTTTTTTTATTTTTGTA
GATATTTTATTTACAGTATTTTTCAGTAAACTTTATTCCTAGCGCTTTCC
TTTGGTTGAAACCTAGCCTAATTTCGATATACCATCGTGTGTGATATACC
ATTGGATGGCAATCGCGTCATCGATGACGCCGAAATTTTCACCAAAGATA
TCATAGAAAGTTTTGACCTACATTTATCCGTCTCTTGTTGTTCCAAAGCT
AGAATAGTGTAGACTTTTAACTCGACTCTCTTACATTCAGTTTTCCTAAG
AGTTAGAATCCATCAACACTACGCGATTCTGAACGGTCTTGCGAGAATAT
AAATTATTGTGTAGCGGCTTAAAGGGATAATCAGATGGTTTGAAATATTT
AGATTACAGAAACCTTCTGTAAAACCTCAAAGTATTTTTGTGTAACAATA
TTTTCTAAAATCAAGATATATAAATTTGAAATTTTTGAAAATGGGTTCTT
ACAAGGTTTTTACGTTAAAATTCTATTGTTTTAATCCTAAAAGCCAAAAA
CTTGTAATTTTAATATCTCAATTTTTGGAAAATAGTTAGGCAAAAATATT
TTAAGACTTTGCTCAGGTCAATAGAAGGATCCCATATGCCAAATATTACA
AATCATCTGATTATCCCTTTAAGGCAACTAATATACGACTCAAAAATATG
GATGCACTTTCCATATAGGATCTGACGCTGGAAGCAAATACTTTTTATAG
GTAATCCTTTTAACAACAATGGCGACCCAGGGTTTAAATCACAAATCTTT
GTCGGTTACAAGACAGATAGTCATGGCAAAGTCTCTTTGAATAATGGTAT
TACTGCAGCTGGGCTGTCAACATGTCGTCGTTCTATGACGTCAAAAGCAT
TCTCCAACTTGAAAGCTTACAGGTATAATATTGTATCCCGTATTAATAAG
ATTCTAGCGATTTCATTGGCCAATAAACATCACGTGGAGATGAGATTGTA
TTTACCCTCTTCGCATATTCGATTGAGAAAAAAAAGAAGACTTTGTGTAG
CCACCAATACGATTTTTATTGACCCAATATTACTGTTTCCCACCTCCAGA
AGACCTATAGTATTTCTGCTCTCGAATCCCACATTGTTCCATAATGTATC
TCTCTAGAATCTTATTTACCACGATTTACTCTATGATTGTCATTCCATAA
TATTTCTTTTGTAAACACCTGAGTATATATTTTATACCCATGGCTGTATA
AAATATATACTTTCGGTTACCTAATAGCCGTCCGCCTGCTAATTAATTTT
TCGAAAATTTTCCACCCAGGACATTCTTATTCCAACCCCCCGCCCCCGCT
TATTAATTTTTGGGAAAATGTTTTTGAAAGTTCCCTCTTTTGTCCTAGTT
CTGCTGTATTAGCCTCCTTTTCAAAAATTTTCCACCCAGGACATTTTTAT
TCCAACCCCCCCCCTCCCCGCTTATTAAGTTTTGAGATTTTTTTCCAACC
CTCCTGCTTATTCCAACCCCCCCTGGCTATTAGGTACCCGAGAGTAGCCT
TAAAGCTTACTTTCTCTTTAGAAGAAAGGTATACACGTTTTTTTTTTTTT
TAAGAAACTAGTTTTACCAAGCAGCCTCAATGTTTCTCAAGAAATCGGCC
TTTTGAGCCTTAAATGTTTCTTACATGTTTCTAAACTTTTTGACATAATC
AGCCTTGTGAAAGGCTGGATTGGAAGGTTCTTAAAAAAACCGAATTAAGA
AATGTTATTTTCTCATTCTGAGCCTCAGCATGTTTCTTAGATGTTTCTTA
CTTTTTAGGCACTCTGAGCCTCATGTTTCTTAAAAGTGTGTTTCTTAAAA
AAAAAAAACGTGTAATCCTTGTTTTGTTCTTTAGAAACTTTATGTCTGAA
TCGTCCACAAGTGGTTGGGATTTACAAGTCGGTACTGAAACTAAAGTCAC
CGCTGGCGTTAAAATCAAAAAGTTTATTGAACTCAAAGCTGAAAAGAAAA
TTCCCCCAGCATTTACACGTGTGTGGAGTGATTCCCATGGTATGAAAAAA
TTGGAAGATTTTTTCTCACAGAAGAAAGGAATGGCCACACTCACCCAAGG
TGTTTGTACTATGTATGAAGTGGATTTGAACAGCTTCCATTTACCACCGT
TCAGAGCTTCCTTCAAGGTATTTGATAAATATTTTCTTGTTCTTTTTATA
GTACAGAAATCTTACATTCGAGGAAAAAATATTAAAGCAGACCTTAATCC
TTCGAATCCGAGTGACGTGTATACACGTTCTAAGTTTGCCAAAATACCGA
GTCCAAGACTTAAGGCTATAGCTCCTGACCGATGTATTTATATATGAAAA
TACCTTTCTAATGGTGCCAAACCCATTATCTAACTTTTAAATTACAAGCT
TTTATGCCAGTTTGAAATTTTGGATTAAAAAAGAAAAAATGGAAAGTAGT
CTTTGCGCAACAACTAGTATCTTCTCTTTAATACCTTAAGGGAAGAAAAT
TTGGTGGAAAGAAATTTTGGCGAATAGAAATTTTATTAAATCGCCAAAAT
AAATTCCGCCAAATTGCACCAAAATTAGCGAATGGACTCATTTGCCAAAA
TTTCTTCTCTCTAATAATTCTTCTTCTTCTTCTTCAATTTTCAGACTTCC
TTATTAGAACTATACAAAGGAGCTTCACTCAGTCACACACATAAAGTCGC
ACTTTTCCGCAAATTCATTAACGAGTATGGAACACATTTCCAAGTCAAAA
CACAACTTGGTGCCATTTTTATGCATCAAACACTTTATTCAGAGGTTGCA
CGAAAACAATTTTCTGCAGAAACTCTTCAAAGCTGTAATGATCGAACTGG
TACACGTATTTTTGGCATTCAAGTTGAAAAAGATAAAAGTGAATGTACAT
CGAGTGACCAACAGAAATTGAATCAACTTGGTTCTGCGCATGNGAACTGG
TACACGCATTTTTGGCATTCAAGTTGAAAAAGATAAAAGTCAATGTACAT
CGAGTGACCAACAGAAATTGAATCAACTTGGTTCTGCGCATGTTCAAGAA
TACATAATTACTAAAGGTATGGTTCATTGATTCTTCAAATGTCAAGTTAT
TACCAAAACACCCCATGGCCCTCGGGGCGTCGGCCTTTTTTCCAGGAATT
CTTACCAAATTGACTCGAAATGGTTTTCTCCTTTGCCCAACTAAAGCCAC
CAAAGTTTCTTGAAATCTGAAATCTCTAACCTCAAGCCGTGGACCTTGTA
CCCTGCTTTTTAGCGATTCTGGGAATTAAAATCTATCTCGTCCTTTTTGC
TATGGTTTATCTCAAACATCATTCTGCTTAATAATTTGACACTTAAAATG
AGATTAATTTAAATTAATTTAACCGTCTTAACCCGAGTGATACACTAATA
TATCCAGTCCTAAACTTAAGGTCATAACTCCTGACCACTTTTAGATGCAT
TAATGTAATCATCTCTATATCTTTTCAAACTCTTTCTCCTCTTTCATAGG
ATCTAGACCGACAGATATTAAAGACTGGGCCAAGCAATCATTCATCCCAG
TTCCCTTACGATTCCAACTATCACCAATCATCAATTTATTCACTTACGAA
CATCTCTCTGCTGCAAACATCATCCTGGATGGTAAACGAATCTACAACAG
TTGGACGATCCGTAAATGGTTTGTACCGCTCTATTTCGAATATTGCGAAA
CACTTGGCATTCAAGCATCATGTTTACCAAAGAAAGGATGTGGTTATGAC
GATTTGTGCCCTGTTGATACTGTTTGTACACCGGGTGGCACTACACATGA
ATGTTCTCGTAAGTAAAAATGATCTTCTTAAAAGCTCTTATTAAATCTCA
TATATTCTTAACAACTTCTTGTCATATTTTTGGAACTTATTTGCAATTTG
GTATACGGTTCTTGAAATTTAAGTAGATTTTGGGAGTTGCGAGCTCTCAT
TCAGAGTCTGAATGATGGACCAATGATGGGTAGTTCCTATCAAATATTGA
ACTGGGTTAGTATAGACAACCTAGCAACAAAATTGAAGATATTGTGCATT
TTTGAGAACACATATTTTATTGCAATCTTTTAGAATGGACACAATGGACT
TGTTTCGAATCTTGCCGAAGCAACCTCCAACTCAGACAACGAAGACAACG
TACCTGCTCTGGCTGTTCTGGTAAAACGTACGTAGAAAGATTCGTATCTG
CTGGATCCTGCCCGCCTGTACCGCCCTGCTATAGTAAGTTTTTTAAGATT
TTTAAGATTAACTTTTTATACTGCTTCTGCATCGGAGGCTAGCTACTGTT
TTTACTATTTGAAGCTTTTCCAATTTCTTCTAATAAAAACTAAAGTAAAT
TGAGTACGTTTATATTGAATTTTTTCATTTTCATTTTTCAAAGTTCAAAG
TTTTGAATACCCTGAAATCTCTGCAATGTTTGAGTTGAATGAATGAATTT
CACAAAAGGACCTTTCGGAAAGATAATACAAAACCTAATCGACACTGAAA
TTACCAAATTACCTACAAGAAAAGGTCACGATTGCCTTTGATTGAACTTA
ACCCTTATTCCTTCTGAACTATGAAAGGTTCATTAACCTTTAGACACCGC
TGTTTTTAAAAACAGTGCGCGCTGCTGCCGCTGTTTTTTTCATGAAAATG
GAGGTTTCGCGGAAAATGTCATAAAATCTTAACCGCTAAAGCTTAAGTAA
AAAGTAAACCCATTTTGAAAAGCTAAGGATCTATTATTTCAGATAATACC
AAAAAGATGCCTCATCACCCTTTTAAACCTGACACCACAGCCTCAAATCA
AAACAGTAAAAATTCCATGTTTACGATTTTTTCACTTTTTTTCTTTTTTT
TGACAAATTGAATGAAAAAAGTGGGTACAAGGTAAGGATTGGTCCCAGAA
AAATTATTTTGTTTTAGTTTATGTTATAAGCCACCATTGTGTGAAATTTC
AGGGCTGAAGAAGCTCATTTCATCTCAGAATCTAAGTTTCGGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTATTAAACTTTGAAAGGACCCCAGTATCAAAACGTACGTGGTACGTCT
CTCGGCCTGTATATATGACGTACGTGGTACGTCTCTCGGCGTCTAAAGGT
TAACAAAACTTTTCGAAACATATTTTTTTGACGATGGCACCTACTTCTTT
TCCTTTACTAGAGAGTTTCACAACCTCAGTACACCACACCAACTTTGATT
TGGACGGACATGGTAATTCTGTATATCTTGATCGACATAATTTGGTATGT
CCAGCTGGTAAAGCGTTGAGTGGCTTCAAATTGCAAAGAAATGATTTACA
TAATAAAATCAGGTTAGTAACAGTCCTTGGTGACAGATTTTGATTGTTTC
AATTGTTTTACAAGTATGTTTTGGACACGTGATTTTTAATTGTTCTCTTT
AACGACGCGTGGTTCGCGTAATTTTTTACTATTTTTATGTCCCTTTGAGG
ACGAAATAAGTTTACCATATTGTGCCAACACGGATATCAGTATTGTTCTC
ATTTTGAAAGTGAACTACTAAACTAAACTAATGACTAAGGAAGTGAGAAA
TTCGAACTCATGGCTCTCGACCACGACTTTTCTCCAAGCAGGCTCGGATA
CAGAGGGAGGCTATAACCAATGGAGGAGAGCGTACTTTATTATCGTATTA
CCTTATATGGAAACTAATTACTCTCCATGAATAAGAGAGCCTACCTCCTG
TATCCGACCCTGCCAAGAGAATGATATCGTTAAAATATCGAAACAAGTTT
GTTAAGGAAGAAAGCCAATTTTGACAAGTTGACATTAGATGGTTCCCTTT
GCTGCTGGGTCTTCTTTGGTCTAACCGGAGAAACTACCCAATAAATATCT
TTCAAATTTAACATCTTCTCTAGATATGAATATTACTGCAGTACAATACA
ATATCCTTGTGCAGCCAATTACTACAAGAACACTCTCAAGAAAGACAACG
GACACGGCAACTTAGTTTACCTGGACCGTTTAGATGTCAAATGTAACGGC
AATGATTTGATGACAAGTCAACGATATCTACGAGCAGGACGAGAAAGTTG
GTATCATTATGGATGTTGTAGAATACAATACACTCATCAACAGAGATGTC
ATTACCATTATACACCGAAAAGTCCGCATAACGGCCCTGGTCATGTTATC
TACCTGGATCGACAATATTTCAACAGATGTCCAAATAATCATGTGATTTC
ATCTTTCCATTTGATAAGGGCCGATCATACCCATATTCGTTATAAACTTA
AATGTTGTAAGGTAGAGCCTNCTTGGCATAACGGTCCTGGCCATGTCATC
TACCTGGATCGACAATCTCACAACAAATGTCCAAATAATCATGTGATTTC
ATCTTTCCATTTGATGAGGGCCGATCATACCCATATTCGTTATAAACTTA
AATGTTGTAAGGTAGAGCCTCTCAGTGGCTGATTTGCCTTTGGAGCCAAA
TACCTCATTTAACAATATTGACTATTATAAGCAACTCAACATTTTTTGTA
TCAATATTACCAACTCATGTGCTAAAGATATTTATTCGCATTTATTGACT
GTACAATTATAAGTAATTTGTCATTTTTGTATGAATATTAACAACTCCTC
TGCTCTAAGGTGTATATTGTTATTGGTGCTTAAGTATTGTTAGTTCTAGC
TAAAGATTTCATTAGAAGTATTGACTATCATAACTGATCATAAGCAATTT
ATTATTTTT

Coding sequence (CDS) from alignment at sc0000002:391902..399310-

>TCONS_00000531 ID=TCONS_00000531|Name=TCONS_00000531|organism=Clytia hemisphaerica|type=CDS|length=6480bp|location=Sequence derived from alignment at sc0000002:391902..399310- (Clytia hemisphaerica)
ATATGAATATTACTGCAGTACAATACAATATCCTTGTGCAGCCAATTACT
ACAAGAACACTCTCAAGAAAGACAACGGACACGGCAACTTAGTTTACCTG
GACCGTTTAGATGTCAAATGTAACGGCAATGATTTGATGACAAGTCAACG
ATATCTACGAGCAGGACGAGAAAGTTGGTATCATTATGGATGTTGTAGAA
TACAATACACTCATCAACAGAGATGTCATTACCATTATACACCGAAAAGT
CCGCATAACGGCCCTGGTCATGTTATCTACCTGGATCGACAATATTTCAA
CAGATGTCCAAATAATCATGTGATTTCATCTTTCCATTTGATAAGGGCCG
ATCATACCCATATTCGTTATAAACTTAAATGTTGTAAGGTAGAGCCTNCT
TGGCATAACGGTCCTGGCCATGTCATCTACCTGGATCGACAATCTCACAA
CAAATGTCCAAATAATCATGTGATTTCATCTTTCCATTTGATGAGGGCCG
ATCATACCCATATTCGTTATAAACTTAAATGTTGTAAGGTAGAGCCTCTC
AGTGGCTGAAGAGTTTCACAACCTCAGTACACCACACCAACTTTGATTTG
GACGGACATGGTAATTCTGTATATCTTGATCGACATAATTTGGTATGTCC
AGCTGGTAAAGCGTTGAGTGGCTTCAAATTGCAAAGAAATGATTTACATA
ATAAAATCAGAATGGACACAATGGACTTGTTTCGAATCTTGCCGAAGCAA
CCTCCAACTCAGACAACGAAGACAACGTACCTGCTCTGGCTGTTCTGGTA
AAACGTACGTAGAAAGATTCGTATCTGCTGGATCCTGCCCGCCTGTACCG
CCCTGCTATAGATCTAGACCGACAGATATTAAAGACTGGGCCAAGCAATC
ATTCATCCCAGTTCCCTTACGATTCCAACTATCACCAATCATCAATTTAT
TCACTTACGAACATCTCTCTGCTGCAAACATCATCCTGGATGGTAAACGA
ATCTACAACAGTTGGACGATCCGTAAATGGTTTGTACCGCTCTATTTCGA
ATATTGCGAAACACTTGGCATTCAAGCATCATGTTTACCAAAGAAAGGAT
GTGGTTATGACGATTTGTGCCCTGTTGATACTGTTTGTACACCGGGTGGC
ACTACACATGAATGTTCTCATGNGAACTGGTACACGCATTTTTGGCATTC
AAGTTGAAAAAGATAAAAGTCAATGTACATCGAGTGACCAACAGAAATTG
AATCAACTTGGTTCTGCGCATGTTCAAGAATACATAATTACTAAAGATAT
GAATATTACTGCAGTACAATACAATATCCTTGTGCAGCCAATTACTACAA
GAACACTCTCAAGAAAGACAACGGACACGGCAACTTAGTTTACCTGGACC
GTTTAGATGTCAAATGTAACGGCAATGATTTGATGACAAGTCAACGATAT
CTACGAGCAGGACGAGAAAGTTGGTATCATTATGGATGTTGTAGAATACA
ATACACTCATCAACAGAGATGTCATTACCATTATACACCGAAAAGTCCGC
ATAACGGCCCTGGTCATGTTATCTACCTGGATCGACAATATTTCAACAGA
TGTCCAAATAATCATGTGATTTCATCTTTCCATTTGATAAGGGCCGATCA
TACCCATATTCGTTATAAACTTAAATGTTGTAAGGTAGAGCCTNCTTGGC
ATAACGGTCCTGGCCATGTCATCTACCTGGATCGACAATCTCACAACAAA
TGTCCAAATAATCATGTGATTTCATCTTTCCATTTGATGAGGGCCGATCA
TACCCATATTCGTTATAAACTTAAATGTTGTAAGGTAGAGCCTCTCAGTG
GCTGAAGAGTTTCACAACCTCAGTACACCACACCAACTTTGATTTGGACG
GACATGGTAATTCTGTATATCTTGATCGACATAATTTGGTATGTCCAGCT
GGTAAAGCGTTGAGTGGCTTCAAATTGCAAAGAAATGATTTACATAATAA
AATCAGAATGGACACAATGGACTTGTTTCGAATCTTGCCGAAGCAACCTC
CAACTCAGACAACGAAGACAACGTACCTGCTCTGGCTGTTCTGGTAAAAC
GTACGTAGAAAGATTCGTATCTGCTGGATCCTGCCCGCCTGTACCGCCCT
GCTATAGATCTAGACCGACAGATATTAAAGACTGGGCCAAGCAATCATTC
ATCCCAGTTCCCTTACGATTCCAACTATCACCAATCATCAATTTATTCAC
TTACGAACATCTCTCTGCTGCAAACATCATCCTGGATGGTAAACGAATCT
ACAACAGTTGGACGATCCGTAAATGGTTTGTACCGCTCTATTTCGAATAT
TGCGAAACACTTGGCATTCAAGCATCATGTTTACCAAAGAAAGGATGTGG
TTATGACGATTTGTGCCCTGTTGATACTGTTTGTACACCGGGTGGCACTA
CACATGAATGTTCTCATGNGAACTGGTACACGCATTTTTGGCATTCAAGT
TGAAAAAGATAAAAGTCAATGTACATCGAGTGACCAACAGAAATTGAATC
AACTTGGTTCTGCGCATGTTCAAGAATACATAATTACTAAAGATATGAAT
ATTACTGCAGTACAATACAATATCCTTGTGCAGCCAATTACTACAAGAAC
ACTCTCAAGAAAGACAACGGACACGGCAACTTAGTTTACCTGGACCGTTT
AGATGTCAAATGTAACGGCAATGATTTGATGACAAGTCAACGATATCTAC
GAGCAGGACGAGAAAGTTGGTATCATTATGGATGTTGTAGAATACAATAC
ACTCATCAACAGAGATGTCATTACCATTATACACCGAAAAGTCCGCATAA
CGGCCCTGGTCATGTTATCTACCTGGATCGACAATATTTCAACAGATGTC
CAAATAATCATGTGATTTCATCTTTCCATTTGATAAGGGCCGATCATACC
CATATTCGTTATAAACTTAAATGTTGTAAGGTAGAGCCTNCTTGGCATAA
CGGTCCTGGCCATGTCATCTACCTGGATCGACAATCTCACAACAAATGTC
CAAATAATCATGTGATTTCATCTTTCCATTTGATGAGGGCCGATCATACC
CATATTCGTTATAAACTTAAATGTTGTAAGGTAGAGCCTCTCAGTGGCTG
AAGAGTTTCACAACCTCAGTACACCACACCAACTTTGATTTGGACGGACA
TGGTAATTCTGTATATCTTGATCGACATAATTTGGTATGTCCAGCTGGTA
AAGCGTTGAGTGGCTTCAAATTGCAAAGAAATGATTTACATAATAAAATC
AGAATGGACACAATGGACTTGTTTCGAATCTTGCCGAAGCAACCTCCAAC
TCAGACAACGAAGACAACGTACCTGCTCTGGCTGTTCTGGTAAAACGTAC
GTAGAAAGATTCGTATCTGCTGGATCCTGCCCGCCTGTACCGCCCTGCTA
TAGATCTAGACCGACAGATATTAAAGACTGGGCCAAGCAATCATTCATCC
CAGTTCCCTTACGATTCCAACTATCACCAATCATCAATTTATTCACTTAC
GAACATCTCTCTGCTGCAAACATCATCCTGGATGGTAAACGAATCTACAA
CAGTTGGACGATCCGTAAATGGTTTGTACCGCTCTATTTCGAATATTGCG
AAACACTTGGCATTCAAGCATCATGTTTACCAAAGAAAGGATGTGGTTAT
GACGATTTGTGCCCTGTTGATACTGTTTGTACACCGGGTGGCACTACACA
TGAATGTTCTCATGNGAACTGGTACACGCATTTTTGGCATTCAAGTTGAA
AAAGATAAAAGTCAATGTACATCGAGTGACCAACAGAAATTGAATCAACT
TGGTTCTGCGCATGTTCAAGAATACATAATTACTAAAGATATGAATATTA
CTGCAGTACAATACAATATCCTTGTGCAGCCAATTACTACAAGAACACTC
TCAAGAAAGACAACGGACACGGCAACTTAGTTTACCTGGACCGTTTAGAT
GTCAAATGTAACGGCAATGATTTGATGACAAGTCAACGATATCTACGAGC
AGGACGAGAAAGTTGGTATCATTATGGATGTTGTAGAATACAATACACTC
ATCAACAGAGATGTCATTACCATTATACACCGAAAAGTCCGCATAACGGC
CCTGGTCATGTTATCTACCTGGATCGACAATATTTCAACAGATGTCCAAA
TAATCATGTGATTTCATCTTTCCATTTGATAAGGGCCGATCATACCCATA
TTCGTTATAAACTTAAATGTTGTAAGGTAGAGCCTNCTTGGCATAACGGT
CCTGGCCATGTCATCTACCTGGATCGACAATCTCACAACAAATGTCCAAA
TAATCATGTGATTTCATCTTTCCATTTGATGAGGGCCGATCATACCCATA
TTCGTTATAAACTTAAATGTTGTAAGGTAGAGCCTCTCAGTGGCTGAAGA
GTTTCACAACCTCAGTACACCACACCAACTTTGATTTGGACGGACATGGT
AATTCTGTATATCTTGATCGACATAATTTGGTATGTCCAGCTGGTAAAGC
GTTGAGTGGCTTCAAATTGCAAAGAAATGATTTACATAATAAAATCAGAA
TGGACACAATGGACTTGTTTCGAATCTTGCCGAAGCAACCTCCAACTCAG
ACAACGAAGACAACGTACCTGCTCTGGCTGTTCTGGTAAAACGTACGTAG
AAAGATTCGTATCTGCTGGATCCTGCCCGCCTGTACCGCCCTGCTATAGA
TCTAGACCGACAGATATTAAAGACTGGGCCAAGCAATCATTCATCCCAGT
TCCCTTACGATTCCAACTATCACCAATCATCAATTTATTCACTTACGAAC
ATCTCTCTGCTGCAAACATCATCCTGGATGGTAAACGAATCTACAACAGT
TGGACGATCCGTAAATGGTTTGTACCGCTCTATTTCGAATATTGCGAAAC
ACTTGGCATTCAAGCATCATGTTTACCAAAGAAAGGATGTGGTTATGACG
ATTTGTGCCCTGTTGATACTGTTTGTACACCGGGTGGCACTACACATGAA
TGTTCTCATGNGAACTGGTACACGCATTTTTGGCATTCAAGTTGAAAAAG
ATAAAAGTCAATGTACATCGAGTGACCAACAGAAATTGAATCAACTTGGT
TCTGCGCATGTTCAAGAATACATAATTACTAAAGATATGAATATTACTGC
AGTACAATACAATATCCTTGTGCAGCCAATTACTACAAGAACACTCTCAA
GAAAGACAACGGACACGGCAACTTAGTTTACCTGGACCGTTTAGATGTCA
AATGTAACGGCAATGATTTGATGACAAGTCAACGATATCTACGAGCAGGA
CGAGAAAGTTGGTATCATTATGGATGTTGTAGAATACAATACACTCATCA
ACAGAGATGTCATTACCATTATACACCGAAAAGTCCGCATAACGGCCCTG
GTCATGTTATCTACCTGGATCGACAATATTTCAACAGATGTCCAAATAAT
CATGTGATTTCATCTTTCCATTTGATAAGGGCCGATCATACCCATATTCG
TTATAAACTTAAATGTTGTAAGGTAGAGCCTNCTTGGCATAACGGTCCTG
GCCATGTCATCTACCTGGATCGACAATCTCACAACAAATGTCCAAATAAT
CATGTGATTTCATCTTTCCATTTGATGAGGGCCGATCATACCCATATTCG
TTATAAACTTAAATGTTGTAAGGTAGAGCCTCTCAGTGGCTGAAGAGTTT
CACAACCTCAGTACACCACACCAACTTTGATTTGGACGGACATGGTAATT
CTGTATATCTTGATCGACATAATTTGGTATGTCCAGCTGGTAAAGCGTTG
AGTGGCTTCAAATTGCAAAGAAATGATTTACATAATAAAATCAGAATGGA
CACAATGGACTTGTTTCGAATCTTGCCGAAGCAACCTCCAACTCAGACAA
CGAAGACAACGTACCTGCTCTGGCTGTTCTGGTAAAACGTACGTAGAAAG
ATTCGTATCTGCTGGATCCTGCCCGCCTGTACCGCCCTGCTATAGATCTA
GACCGACAGATATTAAAGACTGGGCCAAGCAATCATTCATCCCAGTTCCC
TTACGATTCCAACTATCACCAATCATCAATTTATTCACTTACGAACATCT
CTCTGCTGCAAACATCATCCTGGATGGTAAACGAATCTACAACAGTTGGA
CGATCCGTAAATGGTTTGTACCGCTCTATTTCGAATATTGCGAAACACTT
GGCATTCAAGCATCATGTTTACCAAAGAAAGGATGTGGTTATGACGATTT
GTGCCCTGTTGATACTGTTTGTACACCGGGTGGCACTACACATGAATGTT
CTCATGNGAACTGGTACACGCATTTTTGGCATTCAAGTTGAAAAAGATAA
AAGTCAATGTACATCGAGTGACCAACAGAAATTGAATCAACTTGGTTCTG
CGCATGTTCAAGAATACATAATTACTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000324XLOC_000324Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000531-exon-sc0000002-1575043694:399085..399310TCONS_00000531-exon-sc0000002-1575043694:399085..399310Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1575043694:398189..398360TCONS_00000531-exon-sc0000002-1575043694:398189..398360Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1575043694:396944..397226TCONS_00000531-exon-sc0000002-1575043694:396944..397226Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1575043694:396045..396466TCONS_00000531-exon-sc0000002-1575043694:396045..396466Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1575043694:395303..395611TCONS_00000531-exon-sc0000002-1575043694:395303..395611Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1575043694:394878..395027TCONS_00000531-exon-sc0000002-1575043694:394878..395027Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1575043694:393299..393449TCONS_00000531-exon-sc0000002-1575043694:393299..393449Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1575043694:391902..392737TCONS_00000531-exon-sc0000002-1575043694:391902..392737Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1510915933:399085..399310TCONS_00000531-exon-sc0000002-1510915933:399085..399310Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1510915933:398189..398360TCONS_00000531-exon-sc0000002-1510915933:398189..398360Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1510915933:396944..397226TCONS_00000531-exon-sc0000002-1510915933:396944..397226Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1510915933:396045..396466TCONS_00000531-exon-sc0000002-1510915933:396045..396466Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1510915933:395303..395611TCONS_00000531-exon-sc0000002-1510915933:395303..395611Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1510915933:394878..395027TCONS_00000531-exon-sc0000002-1510915933:394878..395027Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1510915933:393299..393449TCONS_00000531-exon-sc0000002-1510915933:393299..393449Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1510915933:391902..392737TCONS_00000531-exon-sc0000002-1510915933:391902..392737Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1491911889:399085..399310TCONS_00000531-exon-sc0000002-1491911889:399085..399310Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1491911889:398189..398360TCONS_00000531-exon-sc0000002-1491911889:398189..398360Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1491911889:396944..397226TCONS_00000531-exon-sc0000002-1491911889:396944..397226Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1491911889:396045..396466TCONS_00000531-exon-sc0000002-1491911889:396045..396466Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1491911889:395303..395611TCONS_00000531-exon-sc0000002-1491911889:395303..395611Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1491911889:394878..395027TCONS_00000531-exon-sc0000002-1491911889:394878..395027Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1491911889:393299..393449TCONS_00000531-exon-sc0000002-1491911889:393299..393449Clytia hemisphaericaexon
TCONS_00000531-exon-sc0000002-1491911889:391902..392737TCONS_00000531-exon-sc0000002-1491911889:391902..392737Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000531-proteinTCONS_00000531-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:391902..399310 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.73732	1.07696	0.803129	0.503844	0.66339	0.518351	1.05704	1.18616	0.432938	0.842093	0.674474	0.998616	4.85595	5.75432	0.474607	1.74136	0.580463	1.50263	0.322339	0.475198	0.647994	1.22492	0.551968	0.438516	0.304467	0.393356	0.215849	0.11518	0.471417	0.270268
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000531 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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