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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000818 ID=TCONS_00000818|Name=TCONS_00000818|organism=Clytia hemisphaerica|type=transcript|length=638bp
ttttgagaaaaaatccatcacgaatttgaaaatcatgtcattaaaattga
taagaacaaaggaaaacaATAGGTGTTGTTTCACaaaatattcaagaaaa
taatcagCATAAATAGAAGGAGTGTGATATGGAAGAACATCATCAAACGG
AACATCATCCACCAAGCATTGAAAGAACAATCAAGCCAAGAAAAtttcaa
TCATGAAGCTTTTCATCGTTACCGCCTTGTTGGTTTTAGCCACCGTCGCC
GATGCTCAGTACTGCGATGGGTTTTGTCTTACATCTAGAGATTGCTCATG
GATGGATGGATGCGAATGCAATCCCTTCTTAAGACGCTGTGTACCATATT
TCAAAGATGAAGGATTGAACAAGAGAGATATCTGCTCAGGCTATTGTCGT
TCATCTACAGGTTGCTCAAAAGAATGCAAATGCAATACCTTCGTTAACCG
CTGTGTACCGCTTTTTTAAAGGTGTCGGTCAACACGTACACCTACCCCAC
ATCCTGACGACATATCAATTTGATCTTAATGATTtatcttattttctttt
ttgtagtATTTGAGGTGGACTAAAATAGAACTATGAACAAAATAACCATT
CAATTTCACTCATTATTTCCCCTCTTACCCGAAACTCT Run BLAST on NCBI transcript from alignment at sc0000005:618296..619999- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000818 ID=TCONS_00000818|Name=TCONS_00000818|organism=Clytia hemisphaerica|type=transcript|length=1704bp|location=Sequence derived from alignment at sc0000005:618296..619999- (Clytia hemisphaerica)
TTTTGAGAAAAAATCCATCACGAATTTGAAAATCATGTCATTAAAATTGA
TAAGAACAAAGGAAAACAATAGGTGTTGTTTCACAAAATATTCAAGAAAA
TAATCAGCATAAATAGAAGGAGTGTGATATGGAAGAACATCATCAAACGG
AACATCATCCACCAAGCATTGAAAGAACAATCAAGCCAAGAAAAGTAAGT
TCATTTAAGTATTAATAAGGCGTTTTTGAAATATTGAAACACCATCACTA
TTTCAATGAGACTTTACAAGAACAAGAGGTCAATTCTCAAAGTCCGGGGT
TACTAGGGTTGACTAGAGTTGAGGCTATGTACAGATGAGACCCCTGAAGT
GAGATCCGATCATTGGTGAGACTATTTTTTGGCAAATTTTACAAACGTTT
TACCGTTAAAAAGCGACCCTTACAAAGGCTTTTTGAGATATTTGGCCTCA
AATTTCATAAACTTTGACCCTTACCATTTTTGCTCAAGTATCTCCCGGGT
CTCAAAGAAGAAAGAGTTCTGTTAAATGTCACAGTTATTTTTCTTTTTTT
CTTTAGTTTCAATCATGAAGCTTTTCATCGTTACCGCCTTGTTGGTTTTA
GCCACCGTCGCCGATGCTCAGTACTGCGATGGGTTTTGTCTTACATCTAG
AGATTGCTCATGGATGGATGGATGCGAATGCAATCCCTTCTTAAGACGCT
GTGTACCATATTTCAAAGATGAAGGATTGAACAAGAGAGATATCTGCTCA
GGCTATTGTCGTTCATCTACAGGTTGCTCAAAAGAATGCAAATGCAATAC
CTTCGNATCAGCATAAATAGAAGGAGTGTGATATGGAAGAACATCATCAA
ACGGAACATCATCCACCAAGCATTGAAAGAACAATCAAGCCAAGAAAAGT
AAGTTCATTTAAGTATTAATAAGGCGTTTTTGAAATATTGAAACACCATC
ACTATTTCAATGAGACTTTACAAGAACAAGAGGTCAATTCTCAAAGTCCG
GGGTTACTAGGGTTGACTAGAGTTGAGGCTATGTACAGATGAGACCCCTG
AAGTGAGATCCGATCATTGGTGAGACTATTTTTTGGCAAATTTTACAAAC
GTTTTACCGTTAAAAAGTGACCCTTACAAAGGCTTTTTGAGATATTTGGC
CTCAAATTTCATAAACTTTGACCCTTACCATTTTTGCTCAAGTATCTCCC
TGGTCTCAAAGAAGAAAGAGTTCGATTAAATATCACAGTTAACTTTCTTT
TTTTCTTTAGTTTCAAGCATGAAGCTTTTCATCGTTACCGCCTTGTTGGT
TTTAGCCACCGTCGCCGATGCTCAGTACTGCGATGGGTTTTGTCTTACAT
CTAGAGATTGCTCATGGATGGATGGATGCGAATGCAATCCCTTCTTAAGA
CGCTGTGTACCATATTTCAAAGATGAAGGATTGAACAAGAGAGATATCTG
CTCAGGCTATTGTCGTTCATCTACAGGTTGCTCAAAAGAATGCAAATGCA
ATACCTTCGTTAACCGCTGTGTACCGCTTTTTTAAAGGTGTCGGTCAACA
CGTACACCTACCCCACATCCTGACGACATATCAATTTGATCTTAATGATT
TATCTTATTTTCTTTTTTGTAGTATTTGAGGTGGACTAAAATAGAACTAT
GAACAAAATAACCATTCAATTTCACTCATTATTTCCCCTCTTACCCGAAA
CTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000818-exon-sc0000005-1575043694:619806..619999 | TCONS_00000818-exon-sc0000005-1575043694:619806..619999 | Clytia hemisphaerica | exon |
| TCONS_00000818-exon-sc0000005-1575043694:619413..619443 | TCONS_00000818-exon-sc0000005-1575043694:619413..619443 | Clytia hemisphaerica | exon |
| TCONS_00000818-exon-sc0000005-1575043694:618296..618708 | TCONS_00000818-exon-sc0000005-1575043694:618296..618708 | Clytia hemisphaerica | exon |
| TCONS_00000818-exon-sc0000005-1510915933:619806..619999 | TCONS_00000818-exon-sc0000005-1510915933:619806..619999 | Clytia hemisphaerica | exon |
| TCONS_00000818-exon-sc0000005-1510915933:619413..619443 | TCONS_00000818-exon-sc0000005-1510915933:619413..619443 | Clytia hemisphaerica | exon |
| TCONS_00000818-exon-sc0000005-1510915933:618296..618708 | TCONS_00000818-exon-sc0000005-1510915933:618296..618708 | Clytia hemisphaerica | exon |
| TCONS_00000818-exon-sc0000005-1491911889:619806..619999 | TCONS_00000818-exon-sc0000005-1491911889:619806..619999 | Clytia hemisphaerica | exon |
| TCONS_00000818-exon-sc0000005-1491911889:619413..619443 | TCONS_00000818-exon-sc0000005-1491911889:619413..619443 | Clytia hemisphaerica | exon |
| TCONS_00000818-exon-sc0000005-1491911889:618296..618708 | TCONS_00000818-exon-sc0000005-1491911889:618296..618708 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005 | supercontig | sc0000005:618296..619999 - |
Blast
The following BLAST results are available for this feature:
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