TCONS_00001009 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001009
Unique NameTCONS_00001009
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1691

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001009 ID=TCONS_00001009|Name=TCONS_00001009|organism=Clytia hemisphaerica|type=transcript|length=1691bp
CGTCGCTTCTTTTTTaggctccctgcggtggcaaaaatTTCTTTAGAAGC
CAAAAATATTGTACCGGTAATTTACCGGATCATTTTCCGATTAGAATAGC
GGATATAAGCCGGAGCTGCATTCACGAGCAACCATTCCATAAACAAATAT
GGCGGCCGTGCAACATGTTCTTTTATCCACCGAAGCTGAACTTCTGGTCA
AAGCTCTCGACGTCAGTTCTCTGGAAAAGGTTGGAGATAAAAGatGGTGG
AATAGACATGACATGTTAGAGAAGTTGAATATTCAATCAATAATGAACAT
TCCATCGAATTCTTGCTTCATAACTGAAAACCTGCTGACTCATGGGAAGA
TTTCATTGGTTATCAACGAGTTGATCACTTCAGAGATTTGGTCGGAAAGG
ATATTTCCTATTTTATACCATGAAATGTCACAGAAAGACCAATCCACACT
TCCTGTCTATATGACTCTTTTCCATGAAGCAACTGTTGCGGGATTGGTTG
AATCAGTATTCTACTACAAGGAAGTGAGTGAAGAAGCAGGAGACTTTCTG
TTGGATCTTATCGATTATGCGTACCGAAAACTAACCAAACTCATTTCAAA
gcAACACTGTGAAAGTATAACTCAAAAGGACCCCAAAAACgacTTACTGA
AACAGAATGAGGATATCCAATTTACGATTGCCATGAAATGCATCTCCATA
ATCAAATATATATGTGATGCTATGGATAGtataACATTGAGTGCAATCAC
AAGAATTTTGAATACACATGACTTTCCGTACCTGCTGAGTCAATTGATTG
ATCTTGCTCCttggaaaaagagaaaagaaaacgGAGAAGTGGAAATATTC
ACGGATAACAAATGGGTCATAGTACCAAAAGATGAAACTCACTTACTTCC
AAAGATTGAGGGCCAGGTTTGGTTGACACTTTATCAATTGCTTTTACATC
CAGAAGCACAAAGAAAATATGAATACAACTCTCATCGGAAAACACAACTA
TTAAAGCTTCGAAGGTACCTGCACGAACTATTGTTGGATCAGTTGCCGTA
TCTGTCAGAAGTTCAACGATTTCTTGAGAACCTGTCGGTGATGGACCCAC
CTCCCTCTAAGCAAGACCTCATCATTGAACAGATTCCGGAAGTCCGTAAC
AAACTGGAGAGAATGTACGAAGGACGATGGAACAAGATTGCCAAAACACA
ACTTCAACAAAATTTCACCATGAGCAGTAAAGATATGAAAGAGCATGCGC
AAAGATTGGCTGCAACATATGATTTAGACATTCTTGAGAGTCTGATTGAT
GAGGCGCCAACTTGTTCAAATTGTCAAAACGAAGCAACAAAGAGGTGCTC
AAGGTGTCAAAATGAGTGGTACTGCTCACGacCATGTCAAGTGAAACATT
GGTCCAAACATAAAGAACTGTGTAACATATTGTCAGCTAAATAATACAGC
AAATTGAAAGAAAGAATGCATAACTCTGGATGCTGACCAGCCTACAACAT
CGACTGCCAAGAAGAGAAGGATGTCTTCAACAGCTTCCGCTTTAACAATC
ACACTTTTCGTTTTACACAGTATTGCTATTACGCTTCATTGTCTTGGANg
ttttcttcattttgttgcaagaacttttgaagaatattttggtTTTGGCA
AGTTCGTTGCAGCCTTCCATTTTGTAACATTTTATGTTAAT
Run BLAST on NCBI

transcript from alignment at sc0000007:663000..677968+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001009 ID=TCONS_00001009|Name=TCONS_00001009|organism=Clytia hemisphaerica|type=transcript|length=14969bp|location=Sequence derived from alignment at sc0000007:663000..677968+ (Clytia hemisphaerica)
CGTCGCTTCTTTTTTaggctccctgcggtggcaaaaatTTCTTTAGAAGC
CAAAAATATTGTACCGGTAATTTACCGGATCATTTTCCGATTAGAATAGC
GGATATAAGCCGGAGCTGCATTCACGAGCAACCATTCCATAAACAAATAT
GGCGGCCGTGCAACATGTTCTTTTATCCACCGAAGCTGAACTTCTGGTCA
AAGCTCTCGACGTCAGTTCTCTGGAAAAGGTTGGAGATAAAAGGTATACT
TAGAAATTCAATGACTATCAAAAGGATAACTTTTTCCCTTGGATTTATAT
TTCCCCTTGTCAGAGATCTTCTACTTCTGCGCCAGCACACGACGGGCTTT
CCAGTACACAGGTTAGCGTTTTCCTNGCGCCAGCACGGTGGGCTTTCCAG
TACACAGCACAGGTTTTCCTGGGCTGGGGGTTCCCTTTATCTCCCCATGG
ATTTATTATGTTTCCCTTGTCAGAGATCTCCTGCTTTCTAGGAGCTTTCC
AGGTTTACCGGCAGGTTTCCTTGATCCCCCTTGGCTGGGTTTCTATTTTC
TGGTATATATAGAGGTTTCTTGCATGCCACAAGCCttttagcaactccag
aagatttttcaaatttcaattttttttaaaacctatcctatcttgtagag
ctttgaaaaagaaagaaaatgaggggtcataggccttcagaggataagtg
gttgtaaagatattcaaattttagtgtcaaaaatttgactaaaaatgtca
aaaaaaggttagaaaaatagcttggaaaaattcgaaaaatgtgtcaaaaa
agaaaaaaaagaaattttccccAGTCATGCctcttcaattttgcatatct
ctttttctagtgtagctagaaaCCTGAAATTTGAAGGGAAAATTCTTTGA
TTGCGTTAGAATAttaatatataaaaatatttgtaaaatatttagtatca
aaataacgaaagatatatttttttggaaaaaagaagacattgcattgttt
tattttagtttttgaagaaaagtagcttgggaaaagttgaaatgagtcaa
aaaaggtggtaggacccattttcaaggtgcctctggaaatggaggaacaa
aaacttatgagtaaagcaagaataagtttttctgaaaggagaaaccccaa
atgaaaagaaaatccatttcggcagaaataaaaacttttttttcggacat
tcccatgcaaaagaagcaaaaaagtgataaaaactacatgaaaatgaaag
aactaaaaaattagcaaatgtgatttttgaattcctcaccctttttctga
taaacatacaaagtttcagccttcaaatacattttcctccgtttccagac
acatttgttcatTGATAGTTGCAATTTTTTTTtctcccgtcggcaaacaa
ttttcaaaatgttgcaaaacattctgcattttaccaatttgccgtctagc
acgtgtccacagtgttatataccgctggaaagctaagatcacgggctttc
atttagtaaaaaaacGGAatgctttagcatacatagaaaaaagttccaag
ggttcaaattttacagaaaaatgaaacatttggtttgacgtcaacgtgTA
ACACTTGTGGCGACAAAAACGCGTATAAAACGCGAGTGTATTGCCCTATC
TACACCGTAGCAGATAAACATTTATAATGTAGCACGGGCTTTAATATTCC
TAATTAGAACTAACGTGCCTAATTAGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTTTTACTTATGGCGTC
ATTTTGAAGCCCTCCgcccaaattttgttttgatttttggctcaATATAT
CATCTTTGACCTGCTCTATCTATTGCTCATAGTTAGAATTTGCGGATTTT
GTTTGTTGGTGAAGAAtctgaatttttaaaaaatcatattcttaattagg
attgaaaaacaaagggataatcctaattaagaaagtccgtgcgatcaaaa
aaaaatttgcttaatTAGAATAGAACTCCTGACTGACAAGGCACAGCCGG
TTTATAGGTTTTTTCCTCTGTGGTTAGTTTCTATAGATTCATCCTCTCTA
GTCGCAACAACATGTCTTTCATAGAAGAACAGTAAAGTCTCTAGTGGGAT
TTCTGAATAGACTTTACACGCTGTCTCTGTCTCggtaggcctccagagga
taggTACGCTaagtagcgactccagaagtcatgcaacttttgttgacatc
aaaccaaatgtttcatttttccgtgaactttgaacccttcgaactttttt
ctatgtatgctaaagcgttcttgtttttaccaaaagaaagcccgtgatct
CCGCTTTCCAGCTGtaatataacactgtggacacgggttagacggcaaat
tggtaaaatgccgaacgttttgcaacattttttaaattgttttccGACGG
GAGATAAAAAAATTGCAACTAGCAatgaacaaatgtttctggaaatggag
gaaaatgtatttgaaggctgaaactttgtatgtttatcagaaaaagggtg
aggaatttaAAAATCACATTTgctaattttagttctttcatttgcatgta
gtttttttttacttttttgcttcttttgcatgggaatgtcccaaaaaaaa
aattgatttcttccgaaatggattttcttttcatttggggtttctcctta
aagaaaaacttattctttacttataactttttgttcctccattttcagag
gccccttgaaaatgggtcctaccaccttttttaactcatttcaacctttt
ccaagctacttttcttcaaagacaaaaataaaacattgcaatgtgttcta
ttttcaaaaaaagatatatcttttgttattttgataaatatactaaatat
tttacaaatatttttatataaataatAGTATtgtaacaccatcaaagaat
tctccctccaaatttcaggtctctagctacactagaaaaagagatatgca
aaattgaagaagcatgactagaaaatttcttttttttcttttttgacaca
tttttcgaatttttccaagctattttcctaacctttttttttacattttt
agtcaaatTCTTTACactaaaatttgaatatcttcacaaccacttatcct
ctggaggcctttgacccctcattttctttctttttcaaagctctacaaga
taggataggtttttaaaaaaattgaaatttgaaaaatcttctggagttgc
tacgcTAGGCGAAGGGAAGTTAGGTATTAGTTTACCGTTACAATGAATTC
AAAATTCGAtgcggcaaaatttcattattcattattcattattttactAA
CTCTCCCACGCGCTGCAAGTGTACCTGTACTATTAAGTTATACCCCTTCG
ATATATATTACCCGAGGATAAAAATGCTTCTTTTCGAGGCGTGTGCCCTC
ATATCCTTTGTTTCACATTGGGCGCGCTGGTCCTAGGTCACTTGTTTGAC
AGTACACTTGTGCGGCAGCTCAGTTGTTCAACATTTTAGCaaaattgtcg
aacaactgTATTGTCAACTAACTGGGAAGATCTGTTGTTAGACTTACCAG
TCGGTTGGTTTGAAACGCAGGACGCAGGACAGGGTGTGTACATCAGTTTT
aacaaaatgcttttttcatgATCAATATGATGCTAACGgtgcaagtggat
atagattgatatattttgaaaacattaaatgctccaaaagggctgtttta
gagatatgaagaaagtgacgtcattttcatcaaaaatacgaggcagggga
taaaaatattgatatagtTATGAAATATGTACTTTTGACTGCCTTTAACG
ccattttaatcaatttttgttatcatacccaaggtgatgcaggagatata
atgagatatgatatagcgattgtgaaatagctatttccCTGCCAGGAGGC
TGTTTAAAGATGAcataaatatatatatatataacacGTGTACTTTGGAT
ATAACATATGTAACATACCAatgacattgaaaagataacttcTATTATAC
ATGCGTGATTTGtgtgtaatatataataaaacacgTGGTAGGCACGTGGA
TagattttgacctttaaaaaggTTCCAGATCAACCTTCAGAATGATATTT
CTAACAATTACAATTGTTTTTAAacattctcttctttttttacaTAAATT
AAAACTGACCTGTCAGCAttgacctgcgtcctgtgtcctgtgtCTTGTGT
TTCGAACCAACCGCTTCCCAGTTGGTTGACGCttacttgttcgacaatat
atCGATATAAAAGTCAAACAACTGGGATGTCTAACAAGTAAGCGTCAAGT
TGTTCAACATGTAAGTTGTTCGACAATACAGTTGTTAGACAATTATTTGT
TTCCGCTCATTTTCTTCTCAAAGCTTAGATGGTAGGTACTAATCGGATTA
ATCTTCGCCTTCTTCGCCAAATGTATCCACGCGGAATTTTCGAGATCAGA
CTTTTGGGTAAACCGGGCTTGTAAATATGGTGTTTATGTGACGAAAATTG
CTTTTAAATTCTactcatgtaaatgggtcagtgtttgaagTCCGGCAAGA
TTTCCGGGGAAAAAGCCTATCCTGCGGtgtgcggatctaggtgggtttgG
TCTctcccgtagatctttttcttgggaagttgatcttcaaattagttttc
aacgTTGGCTTGGCtccaattttttcatttatggctcaaattttaggtaa
tttctcatagtttttgaaaatattaatttctataaaaagtgccgggttat
ttttttgtgattccctttagaagttttgcagcACATTTATTTGCctgcga
gtcaagtaaacgcTATAGCGCTTTTGCAGTATTAATCTTTGATGCGCATT
TCGGTGGGACGCTAATATGACTAACTGTCAAGTATGAATAACTGTTAATg
ggaatcaaaattataaagtgcacttacaaacatcaatatatcagatttaa
caaaattaataacgacactgtcatcattgacaataaagcaaaagattttc
tgtcaagagccttgtaaacattgcAACAAcctccatcgaaatgatctgcc
gcagctaagtctaccattttagcgcggtccaAGGATTGAGCAGAGAACAC
TCACAGAACACCCGCAAGCTCCCgtgcgggtgaaaaactttaatctgtca
gTCATTTTCTCAATTGAAGAGTACgagaagcgattctagctttacaatag
tgccgcggatcattagtggatagtattcaattatcattatccctttattt
tcattcctagaacttttgcaaaaaaaaaaggatcttttactgctctattc
acatactgaatttgaaagatcttctatgtggcgttttttttgcaaatttc
aaaaaactgatttttgtcctgcttttgcgggactttagcttaagtgcttg
catGCAGCATCTAGGCTCCAAATATACGTGTTTCCCGTAATtcttgtatg
aagagttaggtctatactgccatagatgaaaaaatttgagccaagccaac
cttgaaaactaatttgaaaatcaacttcccaagaaaaagatctacagggg
agacggaacccacctagatccgcgcaccaccggataggctatttcctgga
aattttcccggacctcaaacactgaccaatttacatgtgcggaattattt
tttctttagcatataaacaaggccttaaattaaaaattgaagcaatgtca
gggaattgaatgacaaagttTGGTTGGTTAATATTCTGGATGCTGCACAT
TTGCAATaggtcattttgtctcattttaagttttcaagttttaattaatt
gttttgGGAActaacttgaacttgattcaggtaactctcatccttgttgt
ggcAAATActtcctgtagatgactgatgttgttttttctgaaagcttgat
ttcctagtgtgactaactgacagtCCGACCaactgataatttttttaact
tttccaaatcttttgagTCAGAGAGACGcaaaattgttgaaattttaTCC
AATTCCATAATATCCAACCCAAAACAAATATTAAGCACCTAAATAGCAGA
GTCATGGCTGtattccttttttataagaacaccttAACCTGCAATTGTAG
AAGTGATCTTGCAATTGAGGTGTGTGCCTTTGTGGATCCAAACTTAGGTA
TTTCTTTATGTTTGCGGTTTGGATTCTAGGATTGTGCGATTGCTtgaaaa
attgaggtttttggtgggaaaattAAACAAAGGTTCAAATTTCAGCTACC
AACCGTCCGACCcattttttaagcatttaggacacgaaccaaacattcaa
ttgggcctggcccaAAACAGAGATACcccatttgaaaaaaagaaggaaGC
ATGGTAGCCCATACACAAAAGGGTCACGAAAAATCAAGAAACATAAATTA
TTTCCATGCGAAAGtgggttttaaatttttttaaagattgacaCTGTCAT
GATTTCCTCTCCAATATGCTAATTCCTACATTTCCCCCCTGAACATTCAC
TTTGGTTGTTCTTATTGAACTTCAAATAGAAATATCTTCTCAATTAAACC
TAATTATGTGTATCATTCCCTAAGGGAAGGGGcattttaaagaaggaaaa
gtgTTATTTATTTTAAGTAATATGGTAAGGAAGTTTCAACTGAAGCTTGT
TGGTCGCAATCCTTTTAAAGCTTGGGTGTCGGTGGGGGCTTTTGAGATTT
TCAGAATGTAGAAAACTAAATTCAATTGAATTACTTGGATGGTTGGTACA
AAATTTATCTTCATTCTGTtataatgtttttctttcagatGGTGGAATAG
ACATGACATGTTAGAGAAGTTGAATATTCAAGTATGTTTAAAGTTTCCAA
ATTTAGAATCATTTTGGTTTATCCttctaactttttattttgttagtTAT
AGTAAAATTTGAATGAATACACTGGAATACCCCGCTGAACCCTGGGGTTG
GGTTAATGCCAAAGCATACAAGAGggtacaagggggaggggtgGTCAATC
TTCATCGATTCTGAGCatacatactttttgaatggtcccaaagaaaattt
ttaagaatttatgaACAAAATCCTATAAATGGGTGTATAATTCAAGAAAT
GCACTAAGATGAACTCTGGTTTCTATTTGAATTCTCAACATCATCTCAAT
TATATATCTCTTTTTAGTCAATAATGAACATTCCATCGAATTCTTGCTTC
ATAACTGAAAACCTGCTGACTCATGGGAAGGTAAATgtttatttgtaaaa
attaaTTAACCACTTACTGACACTATCATCTTATGTGAaggattttctta
aaatttgaatCCATTTAAACGTTCtagaaaatcttcaaagatcttttttt
tctctccAGGTTTCTCTAATTCTTAGTTAGCTATTATCAAGCTGTTATCT
TTATCAAATTATTAAGAAATTTTCTTGCCTTCGTGGGATTTATCAATGTT
TATTTCATGGGATCATTTTAGATTTCATTGGTTATCAACGAGTTGATCAC
TTCAGAGATTTGGTCGGAAAGGATATTTCCTATTTTATACCATGAAATGT
CACAGAAAGACCAATCCACACTTCCTGTCTATATGACTGTATGTTTTTTT
GATATCATTCTTGAATACAGCAATTTACAGCTATTCTTTTGCTTTCACAA
TACTTTTCACTATTTTCAGCATTAGATTGAAAGTGTGATAGCTATGGTTT
TCATAAAATGTTATGGTATGTTATTATTTTAGCTTTTCCATGAAGCAACT
GTTGCGGGATTGGTTGAATCAGTATTCTACTACAAGGTATTTAGACTTCt
tcctgaattttcaaaatatacttCTTTGTCTCATTGACACTACTATGACA
TTGCATAGTTTTTTTGCACATTTACACCGACATATGTTTTTTTAGGAAGT
GAGTGAAGAAGCAGGAGACTTTCTGTTGGATCTTATCGATTATGCGTACC
GAAAACTAACCAAACTCATTTCAAAGTACGTATCATTTCTGTATATATAT
GTGACTTTTTGGAACAAGCAAGTTAATTGATCAATAATGATCTGATAAGG
TctcttgtttttaacattttaggcAACACTGTGAAAGTATAACTCAAAAG
GACCCCAAAAACGTAAgataattgattttctttaagaTATCTTGAATGAT
TACAAGAAGTAAAAATCGATGACAAGTTAAccaaaatttgtatttttcag
gacTTACTGAAACAGAATGAGGATATCCAATTTACGATTGCCATGAAATG
CATCTCCATAATCAAATATATATGTGATGCTATGGATAGGTAAGtgtctt
gtttttcttttacttttaaaactTCTAATACAGGAGAATGGTAATCGGTA
TAATATCGGTAAAATATTAATTTGTTCACTCGAcctctatttttttttca
gtataACATTGAGTGCAATCACAAGAATTTTGAATACACATGGTATGTTA
GCAATTATGAAAACATTTGATTACAGTGGCTGTATCTACTTTTGTTTTTA
TGAATCAGTTTTTTTCTTGATTAGGCATCATATTATTTATTGAACATAAA
CTTCTGTTGTAGACTTTCCGTACCTGCTGAGTCAATTGATTGATCTTGCT
CCttggaaaaagagaaaagaaaacggtgagtttacaaaataatttttcat
tcgtTAAGGGCGTCATTTAAAGTATCTGCTACAATTTGCTTACAcaacat
ttttaaacaaaaaaaaacgactTTTTCTCCTTTCGGCGCCCTGCgtgaat
aaatttgaaaaattcttttgtttattctataatgtcagcatagaggcgcg
ccttctttcaatttcataaaagtaTCTTCAATCGGTTCGCAATCATAGTG
TTTGTGTTTTGCTTTTATTAAGTTACACAACATATCACTCTATTTTTCTT
ACATACCGTAGGAGAAGTGGAAATATTCACGGATAACAAATGGGTCATAG
TACCAAAAGATGAAACTCACTTACTTCCAAAGATTGAGGGCCAGGTATGT
CATCTTGAATATCTTATCATATCACGAGGCTGCCTCCATTTTGCAGGGTG
TCTGCTGGATCTCAATAAAAAAGCCTCAAATATTCCTTGATACTGATCCT
GATACCCTTTTTTGTAGTATtcatgtttgttttgtttttctttggagCTT
TAGAAAGTGTTCTATCTATAAGTCTTGAAAACTTTGAATCTAGTGTAAAA
ACTTTCGTATGCGCCCTGTTTTAGTTTCTTATGCTTGTACTCTTTCTTAG
GTTTGGTTGACACTTTATCAATTGCTTTTACATCCAGAAGCACAAAGAAA
ATATGAATACAACTCTCATCGGAAAACACAACTATTAAAGGTAAGAAATT
ACAGTTCTACCGTTAATTTTCTAAAGTCATTAAAGCAGATtgtaattttt
attgttttatatttGATAGCTTCGAAGGTACCTGCACGAACTATTATTGG
ATCAGTTGCCGTATCTGTCAGAAGTTCAACGATTTCTTGAGAACCTGTCG
GTGATGGACCCACCTCCCTCTAAACAAGACCTCATCATTGAACAGGTTTT
TCCTTTTCCTCTCACATTATCTCACCTNGATTGAGGGCCAGGTATGTCAT
CTTGAATATCTTATCATATCACGAGGCTGCCTccattttgcagggtatct
gcTGGATCTCAATAAAAAAGCCTCAAATATTCCTTGATACTGATCCTGAT
ACCCTTTTTTGTAGTATtcatgtttgttttgtttttctttggagCTTTAG
AAAGTGTTCTATCTATAAGTCTTGAAAACTTTGAATCTAGTGTAAAAACT
TTCGTATGCGCCCTGTTTTAGTTTCTTATGCTTGTACTCTTTCTTAGGTT
TGGTTGACACTTTATCAATTGCTTTTACATCCAGAAGCACAAAGAAAATA
TGAATACAACCTTCATCGGAAAACACAACTATTAAAGGTAAGAAATTACA
GTTCTACCGTTAATTTTCTAAAGTCATTAAAGCAGATtgtaatttttatt
gttttatatttGATAGCTTCGAAGGTACCTGCACGAACTATTGTTGGATC
AGTTGCCGTATCTGTCAGAAGTTCAACGATTTCTTGAGAACCTGTCGGTG
ATGGACCCACCTCCCTCTAAGCAAGACCTCATCATTGAACAGGTTTTTCC
TTTTCCTCTCACATTATCTCACCTTGCAAATACACCATTCTTAAGATGGA
AAATGCGATAGCGATAAGTGAGAGTCCAAAAAAATGGATTGTCATTTGAA
ATGATATTtgataatgggcttttccagaaaaaaaatttacccccactgtt
gaggatattgatttttcgaagtattgaaccccctggatatcctactttat
tagtaaagacctcttggatatccactcttatgaagatgcttacccctggc
cctggatatcgtattttttacttgaaaagacactttaccccctggatatc
cgctcccttatAGATATTTAACcacctggatatccacttttgaacaaaaa
tcgttaaccccctggatatcccaTATCCTCAACAAGGGGGgaacggacta
tttctggaaaagcccaatatggTGGTAATACTCAAAATGTGAAGTTTCGT
CTGGTCATCCAAAAATACAAACTTGAACTAGAATCTCTCTGACTTCCTTG
TGACTTTCTTTTGTTCATTTCTCTGATAAGATTCCGGAAGTCCGTAACAA
ACTGGAGAGAATGTACGAAGGACGATGGAACAAGATTGCCAAAACACAAC
TTCAACAAAATTTCACCATGAGCAGTAAAGATATGAAAGAGCATGCGCAA
AGGTTTGTTTTGGGAACTTTTTTATCCTGTATGAAACTAACTGCGTGCTC
AGCCTGTATCCACGCTACTTCATAAACTAGTAAAAAGATTATTTGGAAAA
GTaaaattctgatttttatgAATTGTCAGATTGGCTGCAACATATGATTT
AGACATTCTTGAGAGTCTGATTGATGAGGCGCCAACTTGTTCAAATTGTC
AAAACGAAGCAACAAAGAGGTGCTCAAGGTGTCAAAATGAGTGGTACTGC
TCACGGTAGGTAGAATCACGTTCTTTGACGTCAATCAGTGGAGCAGATTA
GATGGTTTTGCACAATAGTGTGTTTTCCCCAGTTTTAACCTGTAGGACCC
TAAATAGCGAATAAGATGCGTCACTAcatctctattttgttttactCTTT
CAATGTTTCATTCAGACTGGCCCCTTTTCTTTTACAAGAATTCTACTTCG
TGGTAttctaaatttagaaaaagtagTTTGGTTTTCTTTTGGAAAGATGG
TTTCTTTTTTACATTGTCCTCGAACGCAATAAAAATCGGATTCTGAATAA
ATTGTTATTTTACGAAGAGTTTCTATTTCTTCTCCGTCATACTGTGAAAA
TGTCTCTTTGTGTTTTCACCAAATAAAAAGGAGCAAACACTCATCACTTT
GCTTTGATCAGGGATATTGGTAGCAAAATTACCAATCGGTACGGTGCACA
ATAAGAAACCCATTTCACTCCAAACGAATGTGTACGTGTGATTATTAAAT
TGTTTCATTGGAAAACGAATCATTTGTAAACCGCTTTTGAAAGGGAATTT
CTCattgtgtttttattttctttagacCATGTCAAGTGAAACATTGGTCC
AAACATAAAGAACTGTGTAACATATTGTCAGCTAAATAATACAGGTAGGA
TTtagttgtttttcttcttcgacAAAATTTAAGCCAATTTGCCGCTCTAT
TGATGTCTCCAACCCACGAAATCCATTTGTCGAAAATTCTGAAGATTCTC
TCCATCTCTTAATTGatgtagatttttcacttttcattttcttgttttct
AATGATCTTTGAAACCACAGTAGGTCTTGTATTTTGGTGACTTTTCCGTG
TTTTCTCTTCTCTCCTCTCCTCTCCTTATGACTTTAATTCAAACAGTCTT
CCTATCAAAACTTCAATTCTTCGCTCCCATGATTTGCATAAAGATTTATT
GGTTTTAACTTTAAGACATGATTTTATCTCTATATGGTCGAGATTTTCTG
GTAGCTAATATCAATATTAAGGTTGGTTTTGCTTTTTTGTTTGTCGTGCT
GCAGCTCACTACAGTATTTGGTGAATCTGTCATTTTTACATTGTTATCAA
actaaatgttgaaaaaagcaatgCATCAAACTCTTGAACCATTACTATTT
ATATTTTAATAAGTCGTTTTCTACAAAACCTTTTTTGGAGCCGATATTTA
GTCTAAAATCAAAACCTTTGATACGAATTCGCAAgtttttccaataaaat
ttacTTGAGATAATTAATGAAATTTACCCATTTGAATTGATTTAAACCAC
TAACGTTTTGCTATTATTTTTTATCAGTGATTCTTGGTTGAAAAAGGTGG
GCAAAGAGTCGTTCTAATGTGATTTGATAAGTTATCTTCTAGAGCTGTCT
ATCTTCATTCGCCGATGcggttttaattttcttaaatgacgttttacatt
ttaaaatcaCATTTATCTTAATTCAGCTCTTAATTCATAGCTTTTATTAT
TTATCGTGAGGATTATCTAAATTGTCACATCTTTATATGAACCTCGCTGG
GCTTTTTCTCGACACAAAATCTTCAGAAATTTTCGTGGatgtttttggaa
attttttaaatgcacttcaattcatcatggatattcttaactttttggag
aaatcgtcctaaaatatttattctgcattcttaggttatagtctaaattc
aaactagatttaaTATGTAATACATACGTCTAAACCATAAAATAACATTT
TGGTGAAAGTGTTgagataattggcaatttacagttaaaaatgctctgaa
atggcatttttagggtttatttactaaattccatgatggcgatattctta
gcatattcttaagtttttggccaattttatcaagaatattcttataaaag
aaaagcgTGTATACTGTTcgacgaagaaaaaatattaccTAGCGTGAAGG
GAAATGGAATATTATAATATGGGAATGCGTGAAAAGGGGGTTGACGAGAA
TTCTTTGCTTTACTCAGGAGAGAAGGTTTTATCTCTTTGttatgaagcaa
aataattCAGCGGGCAGAATTGAAAAAGGAGATCCTAATTATCTGAATTA
TTTCGCCGCCTGTTTACTTTATATGAATCACCATGGTAACACGAGAGAGA
AAATCTTCTACTCCATTTTCTGTTGACTCTTCATGttaacatttcaaatt
ttccagtcaaaaaCAAAGTTGCCATNTTATCAGATAAAATGAATTAGCCT
CGGCAAAATCTTTATAATTTTAAAGTTCTTTCTATCAAATAAAATCATTA
AGCCGAGCCATTGGGCTATTGTTATTGTAAAATGTCTTATTAGAATTTTA
CCAAACGATCATTGCTTCAGTAGTTATTCCCCTCTCTGTACATGTAGGTA
AAAAGTTGATTGTTTGGTCATTCTCTGAAACCATCTGAAAGAAGTGGCAA
GCAAAGTACTTTCTTAATCATCCAATAATTGTTTCATTTCCATTTTGGTT
GAAGTGTTTTTTCAAGTGCGTCATCTGTTCTGTGAATGGGATTATTTAAT
TGATTAGAAACtgtattttcatattttctgcAGTTGGGGGTGTCAAAGGA
AGTGTTTCTGTATGATTCTGCAATTTCCAGTACTGGCTCCTAAACAATTC
GAATAGCTGCGAATAGTGAAATTGTTTGATACTTTTCATCTTTACCTTTG
AGAGATAATAGAAGCATGTTCTTTCGATTCGCAGATATTCGGGTTGGCTT
TTGGTTTGGTTATCTATTTTTATTATCAAAGGGCGAAAGGAAATCATAGT
ATATCTGCTTTCCTGAATCCTTTTCACTTTGAACTCGCTGATAAACGGAG
ATTTTTATGATCTCTTTAAAAAAGACCAAGTTAAACGAATCGACTGGTTA
GCTCTTTGCTTTGATGAAATCCTCATACGAAATTGTTTCATCTTTCGAAT
TTTCGTAAGGCGGAATTGTTTGGATATTGCTGGTTGTTGTTACAATTCAT
ATTTAAGGTGTCATGCAGCTTTCATCCATCATCCACACTTTCCCTTTATT
NtatttctttttcttttcatcatgTACCATATTTGGGAGGTATTAAATTG
CTCTTTCCCACGTCAAAGATATTTTAGTCCTTTGTTGGAATTACACGCAT
TtgagtaatttttgaaaatacgaAACGAAAACTATCTTGCGTAATTNATT
TTTTCTTCaaaccaaaaagtaaaaatgttcGCTTTTGGGACTTACATCAG
GCTTCCTCGGTTTCTTTTTTTTACGTTTACTCGCTAACTTGGTTATGCAT
ATCACACAGATGGCTTAAGTATGTACACCAAGTAGGCTTTTGAATTGTGG
TTTCATTCTTTGATATCGCTGACCGATAATCCAATATCCATTGATGTCGA
ATGAAGATAAGTAGGAGAAACTTCCATCCAAATTCATCAtttttgattac
ttttatttgtGGAAGGGGGTGCACAAAATTGCTAATGAATTGTCTAATGA
CAgtgtattttgagaaaaaggAACTACTTTTTTCGATCAATTGTTTGTTC
CattaaaatttccaacctttataaagattttttatttggaCAACTGTAAT
CTataatttattttcctttttttacagCAAATTGAAAGAAAGAATGCATA
ACTCTGGATGCTGACCAGCCTACAACATCGACTGCCAAGAAGAGAAGGAT
GTCTTCAACAGCTTCCGCTTTAACAATCACACTTTTCGTTTTACACAGTA
TTGCTATTACGCTTCATTGTCTTGGANgttttcttcattttgttgcaaga
acttttgaagaatattttggtTTTGGCAAGTTCGTTGCAGCCTTCCATTT
TGTAACATTTTATGTTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000584XLOC_000584Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001009-exon-sc0000007-1491911889:663000..663242TCONS_00001009-exon-sc0000007-1491911889:663000..663242Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:663000..663242TCONS_00001009-exon-sc0000007-1510915933:663000..663242Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:663000..663242TCONS_00001009-exon-sc0000007-1575043694:663000..663242Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:669838..669880TCONS_00001009-exon-sc0000007-1491911889:669838..669880Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:669838..669880TCONS_00001009-exon-sc0000007-1510915933:669838..669880Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:669838..669880TCONS_00001009-exon-sc0000007-1575043694:669838..669880Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:670217..670279TCONS_00001009-exon-sc0000007-1491911889:670217..670279Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:670217..670279TCONS_00001009-exon-sc0000007-1510915933:670217..670279Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:670217..670279TCONS_00001009-exon-sc0000007-1575043694:670217..670279Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:670521..670637TCONS_00001009-exon-sc0000007-1491911889:670521..670637Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:670521..670637TCONS_00001009-exon-sc0000007-1510915933:670521..670637Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:670521..670637TCONS_00001009-exon-sc0000007-1575043694:670521..670637Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:670782..670835TCONS_00001009-exon-sc0000007-1491911889:670782..670835Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:670782..670835TCONS_00001009-exon-sc0000007-1510915933:670782..670835Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:670782..670835TCONS_00001009-exon-sc0000007-1575043694:670782..670835Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:670945..671024TCONS_00001009-exon-sc0000007-1491911889:670945..671024Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:670945..671024TCONS_00001009-exon-sc0000007-1510915933:670945..671024Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:670945..671024TCONS_00001009-exon-sc0000007-1575043694:670945..671024Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:671122..671161TCONS_00001009-exon-sc0000007-1491911889:671122..671161Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:671122..671161TCONS_00001009-exon-sc0000007-1510915933:671122..671161Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:671122..671161TCONS_00001009-exon-sc0000007-1575043694:671122..671161Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:671250..671338TCONS_00001009-exon-sc0000007-1491911889:671250..671338Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:671250..671338TCONS_00001009-exon-sc0000007-1510915933:671250..671338Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:671250..671338TCONS_00001009-exon-sc0000007-1575043694:671250..671338Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:671451..671491TCONS_00001009-exon-sc0000007-1491911889:671451..671491Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:671451..671491TCONS_00001009-exon-sc0000007-1510915933:671451..671491Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:671451..671491TCONS_00001009-exon-sc0000007-1575043694:671451..671491Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:671612..671674TCONS_00001009-exon-sc0000007-1491911889:671612..671674Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:671612..671674TCONS_00001009-exon-sc0000007-1510915933:671612..671674Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:671612..671674TCONS_00001009-exon-sc0000007-1575043694:671612..671674Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:671961..672043TCONS_00001009-exon-sc0000007-1491911889:671961..672043Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:671961..672043TCONS_00001009-exon-sc0000007-1510915933:671961..672043Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:671961..672043TCONS_00001009-exon-sc0000007-1575043694:671961..672043Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:672300..672389TCONS_00001009-exon-sc0000007-1491911889:672300..672389Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:672300..672389TCONS_00001009-exon-sc0000007-1510915933:672300..672389Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:672300..672389TCONS_00001009-exon-sc0000007-1575043694:672300..672389Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:673066..673191TCONS_00001009-exon-sc0000007-1491911889:673066..673191Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:673066..673191TCONS_00001009-exon-sc0000007-1510915933:673066..673191Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:673066..673191TCONS_00001009-exon-sc0000007-1575043694:673066..673191Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:673730..673851TCONS_00001009-exon-sc0000007-1491911889:673730..673851Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:673730..673851TCONS_00001009-exon-sc0000007-1510915933:673730..673851Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:673730..673851TCONS_00001009-exon-sc0000007-1575043694:673730..673851Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:673979..674104TCONS_00001009-exon-sc0000007-1491911889:673979..674104Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:673979..674104TCONS_00001009-exon-sc0000007-1510915933:673979..674104Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:673979..674104TCONS_00001009-exon-sc0000007-1575043694:673979..674104Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:674675..674743TCONS_00001009-exon-sc0000007-1491911889:674675..674743Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:674675..674743TCONS_00001009-exon-sc0000007-1510915933:674675..674743Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:674675..674743TCONS_00001009-exon-sc0000007-1575043694:674675..674743Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1491911889:677727..677968TCONS_00001009-exon-sc0000007-1491911889:677727..677968Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1510915933:677727..677968TCONS_00001009-exon-sc0000007-1510915933:677727..677968Clytia hemisphaericaexon
TCONS_00001009-exon-sc0000007-1575043694:677727..677968TCONS_00001009-exon-sc0000007-1575043694:677727..677968Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:663000..677968 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.74683	4.58291	1.70558	3.41586	7.66006	7.00518	2.67098	1.42908	4.71324	6.51689	2.15387	5.23507	1.42545	2.04326	2.50349	3.85872	1.61422	3.60843	1.41622	1.93144	2.6478	1.36707	1.31186	0.878031	1.86015	1.50248	1.00959	0.240727	2.69306	4.26889
Blast
[Close]
BLAST of TCONS_00001009 vs. Swiss-Prot (Human)
Match: ZMY10 (Zinc finger MYND domain-containing protein 10 OS=Homo sapiens GN=ZMYND10 PE=1 SV=2)

HSP 1 Score: 367.081 bits (941), Expect = 1.140e-120
Identity = 195/432 (45.14%), Postives = 292/432 (67.59%), Query Frame = 2 
Query:  167 VLLSTEAELLVKALDVSSLEKVGDKRWWNRHDMLEKLNIQSIMNIP-SNSCFITENLLTHGKISLVINELITSEIWSERIFPILYHEMSQKDQSTLPVYMTLFHEATVAGLVESVFYYKEVSEEAGDFLLDLIDYAYRKLTKLISKQHCESITQ------KDPKNDLLKQNEDIQFTIAMKCISIIKYICDAMDSITLSAITRILNTHDFPYLLSQLIDLAPWKKRKENGEVEIFTDNKWVIVPKDETHLLPKIEGQVWLTLYQLLLHPEAQRKYEYNSHRKTQXXXXXXXXXXXXXXXXPYLSEVQRFLENLSVMDPPPSKQDLIIEQIPEVRNKLERMYEGRWNKIAKTQLQQNFTMSSKDMKEHAQRLAATYDLDILESLIDEAPTCSNCQNEATKRCSRCQNEWYCSRPCQVKHWSKHKELCNILSAK 1441
            +LL  EAE+LV+ L    L ++G + W  +H+ LEKLN+Q+I++   S    I E L+THGK+  ++ ELI  E+W +++FP+       K Q+T P+YM + HEA++  L+E+VF++KEV E A D +LDL+DY +RKLT L+++  C    +       +P  +L KQ E ++F IA+K +S+++YI D +DS++LS ++R+L+TH+ P LL +L++ +PW +R E G+++ F  ++W  V   E   L K++GQVW+ LY LLL PEAQ +Y   S  K +LLKLR +L + LLDQLP L+ +Q FL +L++ +  P K+DL++EQIPE+  +LER   G+W  IAK QLQ  F+ S +D++  A+R A TY LD+LE++  E P C+ C  EA+KRCSRCQNEWYC R CQVKHW KH + C +L+A+
Sbjct:    6 LLLPGEAEVLVRGLRSFPLREMGSEGWNQQHENLEKLNMQAILDATVSQGEPIQELLVTHGKVPTLVEELIAVEMWKQKVFPVFCRVEDFKPQNTFPIYMVVHHEASIINLLETVFFHKEVCESAEDTVLDLVDYCHRKLTLLVAQSGCGGPPEGEGSQDSNPMQELQKQAELMEFEIALKALSVLRYITDCVDSLSLSTLSRMLSTHNLPCLLVELLEHSPWSRR-EGGKLQQFEGSRWHTVAPSEQQKLSKLDGQVWIALYNLLLSPEAQARYCLTSFAKGRLLKLRAFLTDTLLDQLPNLAHLQSFLAHLTLTETQPPKKDLVLEQIPEIWERLERENRGKWQAIAKHQLQHVFSPSEQDLRLQARRWAETYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTC-VLAAQ 435
The following BLAST results are available for this feature:
BLAST of TCONS_00001009 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZMY101.140e-12045.14Zinc finger MYND domain-containing protein 10 OS=H... [more]
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