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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003660 ID=TCONS_00003660|Name=TCONS_00003660|organism=Clytia hemisphaerica|type=transcript|length=725bp
TTTAGATTAATTTCAATTACAAGGAGAAAATTTGCTAAGACCAGAACTCa
agaaaaaatggtcaaatatAGTACTCTCTTCACCAGCTTAATTTTGCTGA
CGTTACAAAATGGCTCATCTGTGGCATCTATCTTGTTCAATGACAACATG
AGGAGTTTTTCACATGCACAAAAAGAAGGGAAATGCATtgcaaacaaaga
attaacaTTATTTGAAAGAGCAGGGTCAGATTGTTTTTAGGTGAGCCTGG
AGTCATCACAGAACAATGGTTTACAAGTGAGAACGACTGCTTTGCTGCTG
ATTCCATTATAAGgtatTACATCGATAATGGTACAGTGCCTGCAATAGAA
GGCTCCCTTTTTCTGATGCATGGCATAGGATGGGATAATGGTGCAAAAGC
TGGACCCTGGGGCAACAAATGGGTCGGACAACTGGCCCAAAACGGTGGCT
TGTACAATACAATCAGAATCCCGTACGGAAAATCTATTCGGGTAACCGTC
ACACCGCCTCGGTCCGGAGTTTATTGGTTTATCTTAAGAGGGGTTGAAAA
TTACGGTGTTGTAGTTGGAGATTTAGCTTTGCCGCCCACCGCCCGACTGA
GATTACAAAAGATAGAGAATAAGCAATTTGACGTTTATGAGTATATTGAT
TTGGCGCGTTCGATTAAAGAGAATGGCTTGCTTTTTATGGTCACCTTGGC
TGCTAATAGTACGGACTTCAATTAC Run BLAST on NCBI transcript from alignment at sc0000030:593795..596038- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003660 ID=TCONS_00003660|Name=TCONS_00003660|organism=Clytia hemisphaerica|type=transcript|length=2244bp|location=Sequence derived from alignment at sc0000030:593795..596038- (Clytia hemisphaerica)
TTTAGATTAATTTCAATTACAAGGAGAAAATTTGCTAAGACCAGAACTCA
AGAAAAAATGGTCAAATATAGTACTCTCTTCACCAGCTTAATTTTGCTGA
CGTTACAAAATGGCTCATCTGTGGCATCTATCTTGTTCAATGACAACATG
AGGAGTTTTTCACATGCACAAAAAGAAGGGAAATGCATTGCAAACAAAGA
ATTAACATTATTTGAAAGAGCAGGTACAAGTTATAAAAATTCATATATTA
ATTATAAATTTATACATTTTTTGTCTCTCAAATGCATTCATTAGTCTAAC
TAAAATTCTATCACCAAAGATTTAGTCTCTAACGGTCGGTTTTCGGAGGC
CCTGTCCGCACACACCCCTCATCTCATCATCCAACCTTAATAAAAGTATT
TCAAAATTTTTCACATTGTAGAACACCAGGCGGTTACTAGGGTTGGCGGA
TGATATGGCGATATTCCTTATAACGTTTTCTTCTTCATTTTAAACTTATT
CGATGGTTTCAAAACGCAGTTTTGTATAAGAACTCTTTCAGAATCACAAG
GCTCGAATTTCCAAAATAAAAAATTACAAATTTTTAAGAATAAAGTGATA
CTGAGCCTCGAATCTTTGTAAAAAATATTTTTCTTGTTATTACATTCTTT
AATAAGACAAACTAACTAACAGACTAATCTTTAAATGGAATATTATTTCT
TAGGGTCAGATTGTTTTTAGGTGAGCCTGGAGTCATCACAGAACAATGGT
TTACAAGTGAGAACGACTGCTTTGCTGCTGATTCCATTATAAGGTAAAAA
GAATGTTTCAAATCTTACTGAAATACAGTTCACGCTCTCTGATTCGACGT
TCTACTATTCGATACGCTCCATTATTCGATAAATATTGGAAGTCCCTGTC
AACAAGAAACTCTTGTAAACGGCGCTCTACTATTCGATACGTTCCCTTAT
TCGATGAAAATCAGATTCATCTCAAATCAACTCTCTAATTCCATTTGTAT
GGGGAGTTGAATTTTCATCGAATAAGGGAGCGTATCAAATGATGTTCCTC
TTGTTTTTGAGCGTTTCTTGGTGATAGTAGCTTTCAATACAGTTGACGCT
CTCTAATTCGACGCTTTACTATTCGTACTCCCTTATTCGATGAAAATCCA
ATTCCCCTTAAAGATCGAATTAGAGAGCGTCAACTGTATTATCGAATGAT
GGAGTGTATCGAGTATGAAGAACTTTGAATTAGAGAGCATCAGCTTGTAT
TATTGCTTTTTGTTTTGCAGAAAACATTGAAATGACAATGTGCTTTGCTT
ACTATTGTGTACTTACTGAACAATTTGGCGATTGGTAGAGACGCTGAGAA
AATTTAACTTGATAAAGATGAAGTTTACTAGGTTTTAGTGGTGTAGTAAG
GCGAAAACGTAAACAAAACTCAAACAACTTCGTTTTCTTGTTACATTACA
CAGCAAAATAATTTGAACTTTCAGAGAGTTGTGCAATACTACAATCATGG
ACAAAAATATTTGAGACAAAGGGGACTTCCCTGCGAAATTTTAAATACCA
CAAATGATTTTTTAGCGCCTTAAACTACAATTGGAAAGTAGAGTTTTAAC
TCTGAGTTTTAACATGCGACTTAAGATAAAGGACCTTAGGATCTCAGGAT
TTAAAAGCTCAAACTTGTTTAAATAAGGCTTGGAATCAACCACCGAATCT
CTCTAAAATCGAAATATTCATTGAAAGAAAGTGCAATTCTTGCCCGAACT
TTAAATTCTGAAAAACGTTAAAATACACTAAAATGTCAATATATTTCTCG
ACCATAATTATACATAGAATTTTATTTTTCAGGTATTACATCGATAATGG
TACAGTGCCTGCAATAGAAGGCTCCCTTTTTCTGATGCATGGCATAGGAT
GGGATAATGGTGCAAAAGCTGGACCCTGGGGCAACAAATGGGTCGGACAA
CTGGCCCAAAACGGTGGCTTGTACAATACAATCAGAATCCCGTACGGAAA
ATCTATTCGGGTAACCGTCACACCGCCTCGGTCCGGAGTTTATTGGTTTA
TCTTAAGAGGGGTTGAAAATTACGGTGTTGTAGTTGGAGATTTAGCTTTG
CCGCCCACCGCCCGACTGAGATTACAAAAGATAGAGAATAAGCAATTTGA
CGTTTATGAGTATATTGATTTGGCGCGTTCGATTAAAGAGAATGGCTTGC
TTTTTATGGTCACCTTGGCTGCTAATAGTACGGACTTCAATTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003660-exon-sc0000030-1575043694:595816..596038 | TCONS_00003660-exon-sc0000030-1575043694:595816..596038 | Clytia hemisphaerica | exon |
| TCONS_00003660-exon-sc0000030-1575043694:595246..595335 | TCONS_00003660-exon-sc0000030-1575043694:595246..595335 | Clytia hemisphaerica | exon |
| TCONS_00003660-exon-sc0000030-1575043694:593795..594206 | TCONS_00003660-exon-sc0000030-1575043694:593795..594206 | Clytia hemisphaerica | exon |
| TCONS_00003660-exon-sc0000030-1510915933:595816..596038 | TCONS_00003660-exon-sc0000030-1510915933:595816..596038 | Clytia hemisphaerica | exon |
| TCONS_00003660-exon-sc0000030-1510915933:595246..595335 | TCONS_00003660-exon-sc0000030-1510915933:595246..595335 | Clytia hemisphaerica | exon |
| TCONS_00003660-exon-sc0000030-1510915933:593795..594206 | TCONS_00003660-exon-sc0000030-1510915933:593795..594206 | Clytia hemisphaerica | exon |
| TCONS_00003660-exon-sc0000030-1491911889:595816..596038 | TCONS_00003660-exon-sc0000030-1491911889:595816..596038 | Clytia hemisphaerica | exon |
| TCONS_00003660-exon-sc0000030-1491911889:595246..595335 | TCONS_00003660-exon-sc0000030-1491911889:595246..595335 | Clytia hemisphaerica | exon |
| TCONS_00003660-exon-sc0000030-1491911889:593795..594206 | TCONS_00003660-exon-sc0000030-1491911889:593795..594206 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000030 | supercontig | sc0000030:593795..596038 - |
Blast
The following BLAST results are available for this feature:
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