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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003810 ID=TCONS_00003810|Name=TCONS_00003810|organism=Clytia hemisphaerica|type=transcript|length=274bp
TACAACCgtttgaagaaaaatataaaagatatgAAACTCTACCACCTGAT
ATCAACTtggcgaaagtgaaagtagcagaAGTCAAGCGACAGCTGATTCt
acttgaacaaaaattgcaatgtgATATCGATGCTCTGGCACTCTGAATTC
CTCCATCATTTAATTCATTCATGCAGATTCATGTACTATTTATTTTGTAC
ctatattcaatattttttgtatCATAGTATGTTTATAGTATCTATAAAGT
TATAACATTACTACAAAGGGGGTT Run BLAST on NCBI transcript from alignment at sc0000031:627884..629306- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003810 ID=TCONS_00003810|Name=TCONS_00003810|organism=Clytia hemisphaerica|type=transcript|length=1423bp|location=Sequence derived from alignment at sc0000031:627884..629306- (Clytia hemisphaerica)
TACAACCGTTTGAAGAAAAATATAAAAGATATGAAACTCTACCACCTGTG
AGTATTATGATGATATTATTACTGGTAGCGTGTTACATTTATTGCCTTTG
ATCAGGGGGGGGGACTCAGTTAAATCTGGCTTCGGGCAATTCAAGAATGT
GACTATCAAACCAACTAACTGGGTTACCAATAAAGGCATTTTTCTTAATT
AGGATATCAACTTGGCGAAAGTGAAAGTAGCAGAAGTCAAGCGACAGCTG
GTAAGGAAACCGTTACTCTTGCGACTAAAATACATGTTTTTTTATAAGAA
CAAACTATATGAGAACATAAGGCTTCGATGACCAAAATGTTAAGAACAAG
CTAAGAACATTTTTAGGCTTTACGCGGACTCTAAAACACCCGATTTCTTA
GGAAAATGGAAAAAATGCTTCCAAAATAGTGAAAATAAGAAAATGTTAAG
AACATTTTTAGACTTGAAATTAAAAAAATCAAGAACATCTGACGGCTTTA
AAATTTTTGGATGTTTTTATAAAAAACTAGTATCAAAGGTGGTAAACGAT
ATCTTCTTATTCTCAAATCGGACCGGACCACAGATTTCTGTAAAGCCCGA
AGAGCTAGATGTCGCGCTTTTAGCTCCTCCGAGCAATAAAAAGTGAGCAA
CGCAAAAAATATTGTTGCTACTGTTTTCGAAAACCCGCGATGCTTTATTG
GTCAAGCGCTGAAATTCTATTGTAACGTCACGTGACCTACGTAGGATTTC
CTACCTAACCACGGCACACTTTTCAGCCAAAGCACGATATCTAGCCCTTC
ATAAATCCATGAAGAAAGTCCTGCTAAAGATAAGGTTTCGTTGATTAGTT
CAAGCGGTTGCATTACAATGTAGACGTAGCCTTAGTTTAGAGCTTCATTT
TAACCGAAATGCGTATCCTTTCTCGGAATCTGAAGATCTGATTTAAATAC
TTCTTTACACGTTTTTTTATCACGAGAACATCCAAAAATTGTAACGCCCA
CGGATGTTCTTAACTTTTTGATGTTCTAAGAATATTCTTAATGTTACCAA
TTTGTGTGTAAGTGAGTTGACGCTATAAGAGGATTGGGCTCGACCAAAGG
GAAAGGATCACGTCAAATGTCTGTATTTGTGAGCAATCCAATGCAATGAC
TATAGACGTTCAACTTCATTAAACCCTGGCAATCTCGGGTCCAATCTTTT
TTTTTATACGTCTTTGGACATTCTCAACGCACATTTTTATTTAGATTCTA
CTTGAACAAAAATTGCAATGTGATATCGATGCTCTGGCACTCTGAATTCC
TCCATCATTTAATTCATTCATGCAGATTCATGTACTATTTATTTTGTACC
TATATTCAATATTTTTTGTATCATAGTATGTTTATAGTATCTATAAAGTT
ATAACATTACTACAAAGGGGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003810-exon-sc0000031-1575043694:629260..629306 | TCONS_00003810-exon-sc0000031-1575043694:629260..629306 | Clytia hemisphaerica | exon |
| TCONS_00003810-exon-sc0000031-1575043694:629057..629104 | TCONS_00003810-exon-sc0000031-1575043694:629057..629104 | Clytia hemisphaerica | exon |
| TCONS_00003810-exon-sc0000031-1575043694:627884..628062 | TCONS_00003810-exon-sc0000031-1575043694:627884..628062 | Clytia hemisphaerica | exon |
| TCONS_00003810-exon-sc0000031-1510915933:629260..629306 | TCONS_00003810-exon-sc0000031-1510915933:629260..629306 | Clytia hemisphaerica | exon |
| TCONS_00003810-exon-sc0000031-1510915933:629057..629104 | TCONS_00003810-exon-sc0000031-1510915933:629057..629104 | Clytia hemisphaerica | exon |
| TCONS_00003810-exon-sc0000031-1510915933:627884..628062 | TCONS_00003810-exon-sc0000031-1510915933:627884..628062 | Clytia hemisphaerica | exon |
| TCONS_00003810-exon-sc0000031-1491911889:629260..629306 | TCONS_00003810-exon-sc0000031-1491911889:629260..629306 | Clytia hemisphaerica | exon |
| TCONS_00003810-exon-sc0000031-1491911889:629057..629104 | TCONS_00003810-exon-sc0000031-1491911889:629057..629104 | Clytia hemisphaerica | exon |
| TCONS_00003810-exon-sc0000031-1491911889:627884..628062 | TCONS_00003810-exon-sc0000031-1491911889:627884..628062 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031 | supercontig | sc0000031:627884..629306 - |
Blast
The following BLAST results are available for this feature:
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