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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003859 ID=TCONS_00003859|Name=TCONS_00003859|organism=Clytia hemisphaerica|type=transcript|length=1249bp
CACAGGCATTTTAATCTCGAGGATTGAGTAAGTGTTTGAGTAGTATTTTT
ACTaccattttatatattttatgttATAATGTATATGTATGTATGGAAAG
CCCAGTCAAAGTAAAAGCTGTTTACAAAAAAGGTATTCGGTATTTTTGGA
CCGGACACTATAACTTGTAAAACTTGTAATCTCTTCCACAACTCTCTGCC
GAAGTGAAAACTCTGCCAAAAGTGAACaagatcaaaattgaaaaaactga
cgtcactttttcttttaaaaagtgatCTGAAACCATTGCATTGAGTTGAG
AAAAGTCatgagaaaataagaaaatctggAAACGGTCGACAACAGCAGCA
ATATCGTCGAAAACCACgaatcaaaaataaaaggtTAGAATTTCTCCTTG
TCGCTGAAGATTTAAGAGAAGAAAAGATGGGTggtaaaaagaacaaaaat
aaagaaaaaggtccTGGTTTAACACCAGCGCAACGGAAAAATAATGCTCG
AAAATCATTGAAAGATCAAGTCGAAatcaaaaaaaccttgaaaagtatCC
AAGAAATTGAACGAGATGATAAATTATGGGACTCGGAATCTGCGAAACTG
GCTGAGCTTGGTAAACAAGTTGAAGAAGGTAAGAAAGATTATGGAAAAGT
AGAAAGTGAACGTAATACGAGGTTGTGTACTACTTTTTTCCATACACCTA
ACTCAAACCAAGAACGAAGAGTCGATTATAAAAAAGCCATGACGAACTTA
GACCATGTCAACATGCTCCTGAAGGAAGACTTGGGTAAGGAAACAAAGAA
ATACGCCTCATGGTATAACGCTTGTGTTCATATGTTGGATAAAGAGAAAA
TAGCCAAGGAGAAATGCCAGTTATTCCATACAAGTGATAAAGGAAAGATA
GAGGATCTGGTCGAAGAAAAAAGAAACGCAGAATCGAAGCTGAAAGAATT
GAAAGGCATTTATCAACAAATGGCGGAGCTTGATAGGGAACGACAAATCA
ATAATGTCAATTTGACTTTAGAAGAATATATGACGCTCAAGCATAACCGT
AAGTCACTGCCTCGCCGTTTCTATCTTCGCTCGTTCGTTTGAATAATAGT
TTCGCCGTTCCTATATTTGCTCGTTCGTTCAAATAATAATATCGGAGTTC
CTATAATTGCTCGTTTGTTCGAATAATAGTCTCGCCGTTCCTATAATTGC
TTGTTCGTTCGAAAAATAGTTTCGCCAATCATATATTTTCGCGTTCGTT Run BLAST on NCBI transcript from alignment at sc0000038:39429..40677+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003859 ID=TCONS_00003859|Name=TCONS_00003859|organism=Clytia hemisphaerica|type=transcript|length=1249bp|location=Sequence derived from alignment at sc0000038:39429..40677+ (Clytia hemisphaerica)
CACAGGCATTTTAATCTCGAGGATTGAGTAAGTGTTTGAGTAGTATTTTT
ACTaccattttatatattttatgttATAATGTATATGTATGTATGGAAAG
CCCAGTCAAAGTAAAAGCTGTTTACAAAAAAGGTATTCGGTATTTTTGGA
CCGGACACTATAACTTGTAAAACTTGTAATCTCTTCCACAACTCTCTGCC
GAAGTGAAAACTCTGCCAAAAGTGAACaagatcaaaattgaaaaaactga
cgtcactttttcttttaaaaagtgatCTGAAACCATTGCATTGAGTTGAG
AAAAGTCatgagaaaataagaaaatctggAAACGGTCGACAACAGCAGCA
ATATCGTCGAAAACCACgaatcaaaaataaaaggtTAGAATTTCTCCTTG
TCGCTGAAGATTTAAGAGAAGAAAAGATGGGTggtaaaaagaacaaaaat
aaagaaaaaggtccTGGTTTAACACCAGCGCAACGGAAAAATAATGCTCG
AAAATCATTGAAAGATCAAGTCGAAatcaaaaaaaccttgaaaagtatCC
AAGAAATTGAACGAGATGATAAATTATGGGACTCGGAATCTGCGAAACTG
GCTGAGCTTGGTAAACAAGTTGAAGAAGGTAAGAAAGATTATGGAAAAGT
AGAAAGTGAACGTAATACGAGGTTGTGTACTACTTTTTTCCATACACCTA
ACTCAAACCAAGAACGAAGAGTCGATTATAAAAAAGCCATGACGAACTTA
GACCATGTCAACATGCTCCTGAAGGAAGACTTGGGTAAGGAAACAAAGAA
ATACGCCTCATGGTATAACGCTTGTGTTCATATGTTGGATAAAGAGAAAA
TAGCCAAGGAGAAATGCCAGTTATTCCATACAAGTGATAAAGGAAAGATA
GAGGATCTGGTCGAAGAAAAAAGAAACGCAGAATCGAAGCTGAAAGAATT
GAAAGGCATTTATCAACAAATGGCGGAGCTTGATAGGGAACGACAAATCA
ATAATGTCAATTTGACTTTAGAAGAATATATGACGCTCAAGCATAACCGT
AAGTCACTGCCTCGCCGTTTCTATCTTCGCTCGTTCGTTTGAATAATAGT
TTCGCCGTTCCTATATTTGCTCGTTCGTTCAAATAATAATATCGGAGTTC
CTATAATTGCTCGTTTGTTCGAATAATAGTCTCGCCGTTCCTATAATTGC
TTGTTCGTTCGAAAAATAGTTTCGCCAATCATATATTTTCGCGTTCGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003859-exon-sc0000038-1491911889:39429..40677 | TCONS_00003859-exon-sc0000038-1491911889:39429..40677 | Clytia hemisphaerica | exon |
| TCONS_00003859-exon-sc0000038-1510915933:39429..40677 | TCONS_00003859-exon-sc0000038-1510915933:39429..40677 | Clytia hemisphaerica | exon |
| TCONS_00003859-exon-sc0000038-1575043694:39429..40677 | TCONS_00003859-exon-sc0000038-1575043694:39429..40677 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038 | supercontig | sc0000038:39429..40677 + |
Blast
The following BLAST results are available for this feature:
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