TCONS_00003927 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003927
Unique NameTCONS_00003927
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length351

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003927 ID=TCONS_00003927|Name=TCONS_00003927|organism=Clytia hemisphaerica|type=transcript|length=351bp
TATTCTATTGGGACTCCAGTACAAGGACATGCAGAAGTTTTATGATTTGG
AAAAGTGTTCTTTGGATAAACATAATTCCTTGATTCATGCGATGATTGGA
AATTTAATGAAAGATACCAATGACAATACTAAGGATATACAAAACTTACA
GCAAAATATCAATCAGCAGGCAACCTCAAAGGCTGATAAAAATGATGTGC
AAGATTTGAGCGATGAAGTAAAGAATGTCAAAGATGAAAAAGCTgataaa
aatgaacttaaagaTTTGAGCGATGAAGTAAAGAATGTCAAAGATGAAAA
AGCTGATAAAAATCAACTTAAagCTTTGGAAGATAGAATGAAGAATTTGG
A
Run BLAST on NCBI

transcript from alignment at sc0000038:782794..806303+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003927 ID=TCONS_00003927|Name=TCONS_00003927|organism=Clytia hemisphaerica|type=transcript|length=23510bp|location=Sequence derived from alignment at sc0000038:782794..806303+ (Clytia hemisphaerica)
TATTCTATTGGGACTCCAGTACAAGGACATGCAGAAGTTTTATGATTTGG
AAAAGTGTTCTTTGGATAAACATAATTCCTTGATTCATGCGATGATTGGA
AATTTAATGAAAGATACCAATGACAATACTAAGGATATACAAAACTTACA
GCAAAATATCAATCAGCAGGCAACCTCAAAGGCTGATAAAAATGATGTGC
AAGGTATTCTCTTGAATTTTGATATTAATACCTTGACACTGAATCGTTTG
TTTTAAACGAGCAAAATTTTTCACCAGGCAAAATCTATCGGCTTGCAGAA
GTTTTATACGGGAATAATAACgaatttttggactttttgataCCTTGAGT
TTCTATTTTCATCTAATTTGTAATTTCAGATTTGAGCGATGAAGTAAATA
ATATCAAAGATGAAAAAGCTgataaaaatgaacttaaaggtttgattttg
aaattatattaagcagttattggacaaggtcgaatccaatatgcaaaaat
atcttttctcgtagcccaatacttttcatattggatgagactgcgtccaa
ataaatggtttattatccgtttATCGCTAAAAcatttctcgttttcaaac
ataattccaatttataagctCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNgtcaatttttgaaatatgtagcctccatggaagctata
tattcgaaaatattggacagcaaagaagccaatcaaatgtcgctatttac
gcgtGTCGGATAATAATTCTTCATCTATCATATAGTAATACTTTATTTTA
AAGGGATCGGCGGCTAATGTTTTTTATTTCGTAATTTCAGATTTGAGCGA
TGAAGTAAAGAATGTTAAAGATGAAAAAGCTgataaaaatgaacttaaag
gtttgattttgaaatatttcttggatGATAATTTATACTTTGTTTTAAAG
GGGTAAGTAgctaatttcttttatttttttgtaatttctgaTTTGAGCGA
TTAAGTAAAGAATGTCAAAGATGAAAAAGCTgataaaaatgaacttaaag
gtttgattttgaaataataattCTTCATCTATCATATAGTAATACTTTAT
TTTAAAGggataccagtggataccccttaaaaccataTACCCCTAAAAAT
CTACAAAGTTTGGTTTTGGGTTCTCTTAAccaccaaacttaatttaatat
tgtTACTATTCATTTTTTTACAATCTCTAATATAGATACTTTCTTAAAAT
Acctattttcaagaattttaaccatcgcaaagtgtcgtaaaattcgaagt
tattgaaaatgttatcaaaaatcccttcaaagaATCAAGTCTTTcggacc
tagagattacacaaatgaatttaaggtcataaaacctatactttttaggt
acctatacttatggtaggtacgaaaaaatcatgtttttctCCATGGTTAC
AcccaaaaaaaattgcaagtccctcaaagttctattttaaagTTATGGCA
GTGGccaataaaatctaaaaatcgactttctcgaNAAAGTTCTATTTTAA
AGTTATGGTAGTGGCAAATGAAATctaaaaatcgactttctcgaaACATG
GTCATCTTGCATACCGAAACGTCAcaaatttgataaagatttagaaaaac
attagtaacATACGTCAAAAATGAAGGGAATAAAAGTTTTAACCCTTCAa
acctttttttgacaaaaaaaacaggcgcaattgcattatgggcatgaaat
attgaaatatacAAGTATTGTTTTGGGAATCGGTTTATAGCATGTATTTG
ATCAATTAATCACGGTTCAGCACCTGAATTACAATTTCATCGTTTCAGTA
AGTTGTGAGCAAGGGGTCAATGATTGTAAGTTTTAAGGTGTGATTTGATT
TGaacgtacagttttgaaaatatttaggtaccaatgatctaattatagca
ttagtaactttgcagtgaatcgctgttcaaaatttgagaccaaaaggact
attttataaaaagtcattcaagaaaaccattttgtaggttttaaggcgGG
GTAAAAATAGCTAAAATCACATTTTTCACGAAGCAATAAAATTTATCATA
ACAGCTTTATAAAAAGGGGAGAAATTCATATGTAGCCTAGACTCACTAGG
AAAAGTTTCAGCCCTTAATGTTTTCTCTATCAGGATAAATTGGGTATCTT
TTTgttgttgtaggttttaaggggtatccactggtaagcagctaattctt
ttattttgtaatttcagATTTGACCAATGAAGTAAAGAATGTCAAAGATG
AAAAAGCTGATAAAAATCAGCTTAAaggtttgattttgaaatatttcttc
aaTGATAATTTATGCTTTGTTTTATGCCTGCGCAGGGTTTTTGCTCGTGA
CGATGAAATTTAggtattcaaaaataaataaaccagccgaggctggaagg
tcagccacttgagcttagctagatagctttaagaagtgggttaacagatg
taagagatgcactgaaacagagtagactaaatatgtttaataatgtacaa
aatgtgaaacatttgataacttgatttaaaattgttgatgtaaaacaagc
ctgagagcttcTCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNaacccccccccccccgacgagaagctcaaagtatactt
ctctttagcattgtccatatagtacgtacgcaaagattttccaaatattt
gacacctCCTCCCCCTTGTatgcagagaacaatagaaatgactttgttta
aacaatagatgtacgcttttgctaaaccccctctccccccttcactgtgt
aTGTACTATATGGATGGCCCCTCCAGTCTGGGTAAATAAATTTTGTAgtt
tagtaccgtcaagttacacaacatgcacacaaccatcttgaagactttgc
tggtcgcaaatgataatcgaaagcaaaacttaaaattcataactatgcgt
gGGAGCTtatttccccccccccttttgctttaaactcgcttttgattggt
ctatgaatttgggcgaatgatttaccgccttggcggaataaacacacaaN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcctttacaa
atgataaaataattattgatgtcctcaaaagatttcaaagtgctttatct
cagataacatcaagcaacacaagtccccaAGAATTTCTAAATTCGTTTAT
GTAATTGCTAATATTTGCAGGATTATTCCTAAGATGACGAAGGTTCAAAC
CTACGGATTACGGagtatatccaagctgaactcGACTGAAAATATAACAA
TGCAGTAACCAAATTGGCTAGACAACCTTTAATTTttgttactctcgggt
acctaatagccgcccccctcCCCCgctaatttattttttgaagattttcc
acNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTACcaccggagcttgatt
taaaaagagactcatgtacaaactcacgaaattgaccaaaaccggcgtta
gacttgaagaaggagaaggagaaggagaaaaattgccgttttaacaaata
tttccttctggaaaggaaatatttaacaatgttAAATAaagaccagattg
atctgtttgttatggctgtgcaagttgtgaccagagtgtgcatgttgtgt
aacttgacggcagcccgctttctgcaagtctgataagagatatctattaa
actgttatcgccattcattccattNaacaccagtttatccacggtttctc
aattttaaaattcggatcagtccacacgaattccctttcaacaagatgta
tagctgcttcttaacagtaaaatattttcgactgacCGGCCAAAtgactc
ccactttttaaagtagaaatgacgggaaccaaacagttttttgcgattcg
cctatatcacaaacacgtccaagtccaaaaaagcacgattgcattcagtt
atcaaatttatacagtagctgtacttttgtaaactttatcaaattccaat
aacattataacaccatcaatccccctagaggcaaacaagaaaaatatgtt
tttattgtaaaaactattaaaaagcagcaatactgtaaaaagtatcagaa
aattcaacataaacaaaaacttgagcaaacggctttaaaccttcaaagga
tgtagaaaaagaatccccttgatgaaaatcatgtgttNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGTTTGATTTGCctagttaaaaaaataaatgacagaa
attgaagcttgcaacagatttacactggaaatactttggtacaacactga
cttatcacatctgactatcgACATCGCTtgatccgccatcttgaaactac
attatgatctgtaaaaacaacgcacgctaaaagtacccaaaaagttaacc
cgatcggaagaaagtttagaaatcaaagtgagatcggaaaatcggaattt
tttttttgccgtcttatggtggaagaaaattttacctatttgaatgctca
gcttaggctgaccaaaaagttgatttaagtcaatctgagctgatATTATA
TGTGTTTTACATACATTGAACTagaatttttttacataaaaagaATTCTt
cattactcttaggttccaaataaacgaccCTCCCCCNNNNNNNNNNNNNN
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NNNTAATCAAACTATTATGAATCAATCAATTGGTAAAACTTAACAAAAAG
AAATTCCTTTTCGTCTCATTTTAAATTGATAAACCAAATATTGATCCAAA
AACAATAGATATTATAATACTGTCCAATAACAAGCCATACTTTCAAAATC
CTTTTTCAGCTTTGGAAGATAGAATGAAGAACTTGGAAATCAAAGATGAG
TCAATTCAGTCCAGGGATGATACAGGTTTTGACTTACTATTATACTATCT
TGAATTCTCTATGAAGGTTTTTGCCAGCATATTTGAGTtgcttatttttt
tcaattttgccattttccactTTATATAAACACATTAAGATGTGAATTCA
TTAcagatgattttaaatttttggacctacccctgtggggtggaggtcct
ataaattaacctgtgttagtccgtccgtccgtttgttcgtctgttaccaa
cttttctcaggattgaatcataggaatcttttgatttttggtacaaaggt
gcaaaatggtagtggccaaaatgtgactgagcccgattttcgaaaaaaac
aattttggggcaaatttgggccaaaaaacggctaaaaaaacgggtttttt
ttagactttgtgaaaaattggatcattaattttttcagattttttgcatg
aaaataggtaaaagatggctcaagcagattttggCAAAAGGATTTTGTTG
Gctaaaaaaacgcatgtttatctataagaatccctattaataagcataca
tcaatgttcttagtcaaattactcaattctttaatgagaaagatgttttt
ttgctcacgaagtcttgagtatgaaagaatatttcacgatcatgaaattt
tggtttctaaacgtttttttataagaaacacaaacaactaattttaatag
gttgtcactatttgtgttctgaatgattttttgacggtcatgctcacgta
tatatcaattatatgtgttatattcataaccaggtaggtccataaaagta
tcacttgtttttatgCAATTCAACGACATCGGTATCAAACCAATTACTTT
TATTTTCCATagtggaacattggaacatatACGATCCTGTCTCCGTTTTC
TATGGTCGTAAGGAActtatcaaaaatattcactCAGAACTTGATTCAAA
TCAAAGAGTCGTTTTGACTGGGTTGGGAGGTGTTGGAAAAACACAGACTG
TTGCCAAATTCACACAGTTATACAAAGATGAGTACCAAAAAGTCTTTTGG
ATAGCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATGAATCAATC
AATTGGTTAAACTTAACAAAAAGAAATTCCTTTTCGTCTCATTTTCAATT
GATAAACAAAATATTGATCCAAAAACAATAGAGATTATAATGATTTCCAA
TAACACGCCATACTTTCAAAATCCTTTTTCAGCTTTGGAAGATAGAATGA
AGAATTTGGAAATCAAAGATGAGTCAATTCAATCCAGGGATCATACAGGT
TTTAATTTATACTATATCAAATTCTCTATGAAGAGTTTTGCCGGCATAAT
TGAGTtgcttatttttttcaattttgctattttccacTTTATCTAAACAC
ATTATGATGTGAATTCACTACagatgatttttattttttttatgcaATTC
AACGACATCGGTATCAAACCAATTACTTTTATTTTCCATagtggaacatt
ggaacatatACGATCCTGTCTCCGTTTTCTATGGTCGTAAGGAActtatc
aaaaatattcactCAGCACTTGATTCAAATCAAAGAGTCGTTTTGACTGG
GTTGGGAGGTGTTGGAAAAACACAGACTGTTGCCAAATTCACACAGTTAT
ACAAAGATGAGTACCAAAAAGTCTTTTGGATAGCTGCTGACAATCTCAAT
AAAACAATGGACGAAATCATCCGCTATTTTGGATTTGGTCAATATCTTCC
AAAAGATCCTTCGACTGAAATGTTGGTCAAGTTATTGTTATCAAAAGTTT
GCAAAGTTGAGGAAAAGACTTTGATTATATTAGATGATGTTACAAACTTA
TcatctaaagattttaaaagtttactTCGTCATGACAAGCACAAATTATC
ATTACTTATGACATCACAATTGACTGATTGGGAGGATCTTGCAGTCACCA
ATATAAGAGTTCCTTGCTTTGAGGAATATGAATCTGTTGGATTTTTGGAA
GGTCAAATCCTTGATGCTTCTGCCGAAGATATTTCAACTCTAGTTGGCCA
TCTACAATGTTACCCTTTAGCTTTACATCAAGCAATATGTTATATACGTA
AGTTGAAAATTACTGTCCCATCTTATATTGAGCAATTTGAAGCTTGCCGC
AAAAGTGTTTTAAGCATGAAAATAAAGTCATTTTCAGACTATGATAAAAC
ATTGTTGACAGTTTGGGATATGGCATTTCACAAGATAAATGAGGAATCGA
AAAATGCTATTTTAGTTTTAAGTATGATGGGTTACATGGATAATAAGaga
atcaataaaaaaactttcacttaTTTGGATAATATTGATGAAATTGATGT
AGATGAAATTGTTTATTTACTCGGTCAATATTCTCTGGTTAATGAAAGAA
ATGGATTTTTGGAAATTCATGCCCTTGTTCAAAAAATGGTAAGATATTGT
GTTGAAGAACAGAATTTAGTTGAAGATGAATGTCCCAAAAAACTTGTGAT
GGATACAATTGAAAAGATTTATAGCTTTAAAAAGGAAGATTTAAAAAACC
TTGCAATGTATTATGATGATGAAGATTTATGGTATGCCCATGTTGTTTAT
TTAATGCAAAATCACTTTATCGACAACCATCAAACTGATTTCTTAAATAA
AATTGGGTTATCTGAATTGTCATTGATTTCAGATAGAAGAATGGATGACC
GTGGCCTACGTTTGATATCAAGTTCTTCGGTTGACCTCCTCACTAAAAAG
TACAAAGAGTCGAAAGAATTTGGACAATTTATTGAAATGGTGAATTCTTA
TACAATTTACATACATTGTTGCGTAGATACTTTTTCAGATGATATCATTA
AAGATCAAGTTATCCCAACAGTAATACaatttgaaaatgaatataACAAA
GAACTGGAGGTCGATCATGAACAACTATACGATTGGAAATTGACTCAGGC
TGAGCTGTACCAAAGATGTAGAATGGTTGAAGTAGCCTCGAAAATAAGGT
CTACATTTATTgaaaaagtattgaaaaagaaagtttACTCTCCCCGAATT
ATattaaaaatggccaaaattgcTGACGATCATGTACCTACGGAAGAGCT
TTTAAAGACACTAAACGTTAAAGACTTTGACAATCCCACTGATGTTATCA
aatattttaaagtaaaaagtaacaatttattgtttcaaaagagatttgat
GAAGCAGAGAatgtttttaaagaatttgAAGATTACATTGATAAGATGTA
CGATTGCATAGCACCTATTGACCAtttcaattttctaaattatAAAGCTT
TCTTTTTGTATAAGAAAGGTAAATACACTGATGCTCTAATGGTTTGTGAT
CAAATATCAAATGGGATCAAATATATTGTTGACGAAAGTGCAGACCGCAG
GTTAATTTCTACTAAAGCATTGANAATGGGATCAAATATCATGTTGACGA
AAGTGCAGACCGCAGTTTAATTTCTACTAAAGCATTGATAAATTTAGCTC
TTGGAAACTTTGATGCTGTTGACAAACTTCACGACGAATCATTGTATTTG
GATTCACTATTATCAACTATTTTCTCTTTCGTCAAATTCCAAAAACATGA
TTTCAGTGAATCATTAAACCTGTTACAAGattttgatgctgataatatca
aaaatttatcATGGTTGATAAAATGGTATGCAGAACTCCACAAGAAATTC
AATGAAACACGTTCACCGGAACTTTTGGAACGATGCTTGGATATGAAATC
AAATATCAATGCAATATTCAAAACGGATTTAGAAAGTTATTCTTTATAGG
TATTTTGTTAGAGAGATTACTTATATTAATGgccttttaaatctttaaaa
tttgatcTTTTATCTCGACCTGCAATGATTTAGATTTCTCACatagttcg
gaccccccccctttcttaaggggggatgacaccttccaaaaaagtgaaga
aggggaggatcagaaattttcactaaaaaggggGGGGATATCAAGGAGGG
Gggatcgtttaagaaggggggggtttacatatattgtagattattttcca
gcactgttatgaaatttggtctgcgTGAAAGGAAGttatttattttcact
aaaaagtggtattacatttgccagacttaatttttctttactgtttccct
tccctttttaccataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgagtaaatagg
tttcttttgttgtcgctataaaaaacctgcataattagcgtgttgtgaca
aaattcttttgtttcaagcctaattatgcgcaaactttttgggtacacct
ctcctatacgaaaaggtgcctatatcttcttgctcagaatttcctagcga
ttctactgatataaccgcatcatgaccgcaccataatatggaaagctaga
gctcgagaaaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTagtatcatt
gcgttaagaatttcttttgctatacattggtaaaaatattgctccttatt
cttaaaaattgaactagtaatcggcaaaaaaagaaaaacaaattttcatt
tttatcgtcaaatcatgtagaaaccgtccgatttgtattgcgagccgtct
tttctggactttcatttaatgacctaatcaacgtttttacaatagaattt
tcaatagaattgatcgttgaactttgaactttgagtaatcagaaaagctg
tttttccatctctttacattcctctgcttTAATACAGATTAAATCTGGTA
TCTGAGAGAGATATAATTACTGTATGTGTTTTTAACACCTGACAGAGAGC
TGTCAGCGAACTTTTCTTTGTTACTTGTAGTATAATTTTTGAACCTTTTG
TTGTGAAAGTAGTGaaattatgaatatttttttgtttgtctcTTTATGCA
ACTGTAACTCAACAATGCTTATCTCAtagtaaaaaattaaatttgtgaAA
CGATTGACGTATGGGAAAGTGAGTTTATATATGAAAGATGGTTCTAGTAG
AATGAGTTTGCTTTTTTTGGACACTAAACTGAAAGATGCAGAACACAAAT
GCAACTAAGTCGACTTCATAATGTAGGTTGATGAATTCACGCAccttttt
tttgttattatcaATAAGGCTGGTAcgtataattttttattattgccCAC
GTGATTgcatatttttaatatttgtttaaatttgaatttataGGAActtt
ataataaatattttttgatagttATTTTATAAGAAGTGTACTTTTTGTCC
CTCCTTTATCTCAGTTATTTCACCGGCCTATTCACGATTTGAACGATTCT
ACCCATACCAACTCCCAAGGAAGGAAATTCTAAATAAGTTTCATGGTTCT
TTTTTGAAACTTAACAAAATCTCTTAGTGAAAacatggaaaattttgaaa
aataaaataaaataatggaGCTAGATTCATTTCTCCAGAGTTTCCCAAAA
ACAAATATtcttatttgatttttataCTACGATTGCCTGTTACGTTCTAA
TGTATATTAAtcaagaaaacattttctttttactCTCAGTTGATATTCAT
TCGTTTTAGTGTTCTTAATAGAGTAGACATTTCAAAAAACCCAGCAAAAT
TTCagaatgaagaaaattttgaattataagggtaatagaccttttcataa
attacgtcacgaacatcacttgcccgTATTTAatcaattaccatggtgat
tatgtctttTGAGGCattaaatgattcttttatgagtaggaagtagtttt
aataaaatccactgggagttaatcacttGACAAaatgaggcaagtgatgt
tcgtgatttaatttctgaaaaggtctattggaagTAGAGTCATTTCCTAA
TAAACAATTCtttgtaagaaatattttgattctGTCATGGTTGGATTCTG
ATAATATCTTCTGCCtgattattattttgttttcttctttttacagaaaa
aataatttaagagataatgaataaaaaaattatgttatgATTGTTTGATA
CCAACTCACTGTACATACTTCTTGTTTTATTGGATTAATGGAATGACTGT
AGATCATCAATGTAAGGAATTTTTGTTTGTCATGGTCTGATTTGACAAAT
TGATCAAGACAAAAATACAGGTATTGCATTATAAATTTTCATGGTTTGAT
GAATGTAGAAAGAACCTCCCAAAAATGACTCTTATAGAGACTGAGTTTTA
GTgtaaaagtgacccttagagaggcatttttgaaacatttacctcaattt
ttgaaaaaaattccttaCTTTAGAGAGACttgttttagaattttttctct
tgagattaaaatattatcttactaaaaatgtgtatttctcaagaaaaaag
tataaaaaatgaaatatttgttgtttaaatttgttgttttttatcagTAT
TGAATAAAGtcagtattttttattttcaaggaaAAGGTAGTCaatttaaa
atctattttatttttatctcgTTGAATTGTTCACTTTTTATCTATCAAGC
AAAACGTTTTCAAAGTACATGAGTGTTTCATGTACTTATTTagggaaaaa
atattcaaattgaagTCTGCGTTGTGTATGTatcaaggaaaatattttcg
taGTAAATACGTTTTCATATTGAATACTTATGTGATGTATATATTTCACA
AAGAATTGCTTTCATAATGAAGTCTTTATATATAAAGTAATTATCAAAGA
CAATGTGCTCAACTTGAAATCTGTTTATAATGTATTTCTTaaggaaaatg
ttttcaattttaaattaagtttttctcaaggaAAAAGTGTTTGCGATGAA
ATCTTTTTGCCTAGAAAAATGTGTCCATATTGAACATCTTTATTGTGTAT
TTCACAAGGAAAATTTATGGACATTGAAATTTATGTTGTATTTATTAAGG
AAATTAAATGAAACAAGTTGATGTGTATCAGAATTGtgaattcattaaaa
aaatgtattCAGAGTAAAAAATTTTGTGTCTCTGGAGGGTAATGTTTTCA
CATTATTGTTATTAGGCTACTTTCCAAAGATAGAAATTTCCAAGTGAATT
GAAGGGTGCCGGATTATTATAACGTACTTCTAAAGGAAAAACTGTGCTTA
AAACCAACTAGGATACTAGGGTTGGAGAATGTTGGTTATGTGGGGACAGG
AACTGCCATAACTGACCCTTGGAGAGaacaaattttgaaacattttgttc
gattttcaaaaaactttctaCCCTTAGCGAgacctttttataattttctc
cACCCCCGGGGCTGAAAGTGAATATGATCTTTGCATTCCTcaataaaaat
atgtttattCTAATTTTCTAAAGTCTTGATTCTATATTCCCTAAGAAAAT
ATGTTCAAATTGAATCTATTTTGTGTATTTCTCaagaaaagtataaaaat
tgaaatttttgttagattttttcaaacaacacccaccacaagcaaaaaaa
aattaaaaaaattgaattttttttttgttttttctaaaaaaaattaaaaa
aattgaattttttttttgttttttctaaaaaaaattaaaaaaattgaatt
ttttttttgttttttctaaaaaaaattaaaaaaattgaattttttttttg
ttttttcccccccccccccccaaagaaaaaaaagaagaaaaagtatctgg
tattttgttaaccaatatTGGAATCTGTAttgtgtatttttcaaggaaaa
aggactcaatttgaaaaagtttgttttcttgaaataaaagtcaaatcAAT
ATACTTCAATATAAACTTGTCCTGACAATTCTAATACaattattctattt
tttagcaaaaataaaagaacaaatacaaaaattgaacaaaatagaACAAT
GATGTTTTATGGACAAAAATATGAGAGATGATTGAATTATTCCATCATGC
ATCATgccactttgctacaaaaggaGAAAAACCAACATTGTAAGCGTAAG
GAAATCATATCTTCTGCCAGTATTAAACTCCAAGGCAGTCCCTGCGGAAC
AaacgtaaaagtggggaggctgaaggctgaaaatgagataaaaatCAATA
Ggaatgtaataaaaaaatctcatttgctcaaaagttgggaggctgaagtc
tccccagtctcccgcTTCCGTCAGGCGTGCAACCTAAGGACcataaagtt
ttaaaagaaaccCTCTGTTAGTCCagcttttcttaaaatttttttcttca
gaagcAATATCTGGTTTCGATTTTCCCTTATAGACCTCATCAGCGAAGTG
TTTCTTGTAGAACATCATGAGTACACCTCTGCNTGGTTTCGATTTTCCCT
TATAGACCTCATCAGCAAAGTGTTTCTTTTAGAACATCATGAGTACACCT
CTGTACATTCTACAAAGCGAGTATTGGATTCGAGTCAATCTCGCTTTGGA
ATATTGCATTAAAGAGGCACTTATAGATGTTCTTTACAATTCTCATAATG
ATGCATCTTACCATGGTCTGCCAACAAATCCATCAGCTTTGTATCAGCGA
TTATTGCAATGCAAACAAGATAAACGTAAGTGAACTTGAGTTGTATCAGG
AAACCTTAACGTAATAATGGAATATAGGTTTAGATTAATATTAAACATGG
CTTGGTAGAGTATTCGCTGTACAATCTAAGGGATGTGAGATTCATCCCCG
GTCACTGCCAACTCAGCAAATGAGttgcttagattgggtaatctgatcaa
TGAGGTAGATAGCTTGGGGCTGAGAGAAGGTGTGGGACTTCACAGGTCTA
CCGCAGATAGAAAAGGGGagagactccctcactccctgCTCTACcaacag
ccaccagatgaaaaTACCTACTTTTTTATTCAAGGGTGACTCCAAGATAG
GAAGTGCATCTGTGTTATTGATTACAATAATAGTATTGCTCACTTTTTAG
CCATGAATGACATTGTTTCCTCTCAATTCAGATACATACTCAACCTCAGT
TTTCTTATGTTTCAGGTAATAAGCTTCACAAAGTGCTAAAATCTGATCAA
TGGAACACACTTTGTCCTCAAAACCAACTTTCAAACCCTGAAGATTGGGA
CATCACCTTACTCATTGCTGTCTTAAGAACTGTTGTTGGTTTTAAACCTA
ATGGAGGCTGGGATATCAAGAATGTTAGTCCAGGTGACCAATCTATTGGA
GCTTATCTTTATTTGGTCAGAAAACTTCGAAACGAATTAAAGCATGGAGC
TGTTACCGACATTCCAGACTTGCCAACgttcaaaacatttttgagtCGAA
TTGAGAACATTCTATTTGGACTTCAGTACAAGGATATGCAGAAGTTTTAT
GATTTGGAAAAGTGTTCTTTGGATAAACATAATTCCTTGATTCATACGAT
GCTTGGAAATTTAATGAAAGATACCAATGACAATGCTAAGGATATACAAA
ACTTGCAGCAGAAAATTCAAGTAATCAGCACTGATAAAAAGGATGTGCAA
GGTATTCTCTTGAATTTTGATATTAATTGCTTGACACTGAATCGTTTGTT
TTAAACGAGCAAAATTTTTCACCAGGCAAATTCTATCGGCTTGCAGAAGT
TTTATACTTCCCATAACAATAATAACgaatttttggactttttgataCCT
TGTGTTTCTATTTTCATCTAATTTGTAATTTCAGATTTGAGCGATGAAGT
AAATAATGTCAAATATGAAAAAGCTGATAAAAATGAACAGAAAGgtttga
ttttaaaaaaaaattttcttcatctATCCAGGGaaatgttatagcggagc
tggatgaaggacgagaattccttagcggattgcttctttgtcttttctat
tgtaaactgttgataatagaaatccatctctgNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNgtccccttgagtgttctgtttttataagaaaaatgaa
gcagacaaagtatttatgcagtacgtttgcacatattttgctatgatgtt
cccgtttttcatcaaaataatatgtgaccccccaagcgatttggagtaca
tcaaaaatgagaccggtcttggtgcggaCGGATCGATAATATGTGCGGCA
AAAAAGCGGCGAAACGATTTACCGTGCGGCcagaaatcatccaaaaataa
tttttaaaaatccatTCAAACGCACTCGATCGGTCACTAAAGAGCACCAT
TTGAATAAGTGCGGTATTCAGTGCAGTCATGGTGCGGAAATTTTGCCGTT
CGAAACGNTTTGAATAAGTGCCGTATTCATTGCGGTCATGGTGCGGACAT
TTTGCCGTTCGAAACGTTTGCCGGCATAACAAACAGCATACAGCATACAT
AGAAACGGcggggaccgcaccatcgtccgctttagtcgacggggaccgca
ccatcgtccgcTTTAGTCGGCGTTTTGTACGCACGGGCCATACGGTACTG
TGCGGTCTTCTNCGCACCATCGTCCGCTTTAGTCGGCGTTTTGTACGCAC
GGGCCATACGGTACTGTGCGGTCTTCTGGCcgcttttttcaatatttaat
cGCACAATTAACCAGTCCGAAAGCGGCACAAGCACGaccgcaccaagacc
ggtctcgtttttaatgtactccaaatcgtttGGAGGGTCAcatatttgta
gaagataccccaaaagcttccttttgtaaatgaaatctatttttaccAGC
GTGtattatgaatttgagaagctttcatgatttctctttaaaaatttcgg
atgtaaatattttgacaaatattgtttcaattgacttgaatttttttcca
taatcagacataccgactatctgaaaatatcagttagaaagtgaggcacc
acGGTAGTACGGtatagcgcggtatttcaaatgaaaaagtactatttata
atcttagagaagaaatttcttacaactttactaatgaaaacaatgttttt
cattttttttaattgtcattcaccaatgttttacagatcctcttgataat
taaaaatttttaatcgtgaacgataaatgcagcagcagaatcattggcta
agaggaaatccaaatttcacgagttttaattaaaaaagttaaatttctta
tcaaatttgtcagggacagagatagaacaaggatttttaaatgtgcgtta
tccagctccgctataacatatttCTGATCTATCAtatataatttctttat
tttaaagGGGTAAGCAGctaatttcttttattcttttatgaTTTCAGTCT
TGAGCGATGAAGTTAAGAATGTCAAAGATGATAAAGCTGATAAAAATGAA
CTCAAAGATTTGATTTCGAAAAcatattttcttcatttatcATAAGTAAT
AATACTTTATTTTAAAGGGATAAGCAGCtaatttcttttattattttttt
tgtaatttcagaTTTGAGCGATCAAGTAAAGAATGTCAAAGATGAAAAAG
CTGATAAAAATGAACTGAAaggtttgattttgaaataataattCTTCACC
TATGATATagtaatagtttattttaaagggataccagtggatacccctta
aaaccataTACCCCTAAAAATCTACAAAGTTGGGTTTTGGGTTCTCTTAA
CCCccaaacttaatttaatattgctactattcatttttttacaaactCTA
ATATAGatactttcataaaatacctattttcaagaattttaaccatcgca
aagtgtcgtaaaattcgaagttattgaaaatgttatcaaaaatcccttca
aagaATCAAGTCTTTcggacctagagattacacaaatgaatttaaggtca
taataCCTCTACTTTTTaggtacctatacttatggtaggtacgaaaaaat
catgtttttctTCATGGTTACACCCCAAAGAAATTGCAAGTccctcaaag
ttctattttaaagTTATGGTAGTGGCAAATGAAATctaaaaatcgacttt
ctcgaaACATGGTCATCTTGCATACCGAAACGTCAcaaatttgataaaga
tttagaaaaacattagtaacatacgtcaaaaatgaagggaataaaatttt
taacccttcgaacctttttttgacaaaaaaaaacaggtgcaattgcatta
tgggcatgaaatattgaaatatacAAGTATTGTTTTGGGAATCGGTTTTA
GCATGTATTTGATCAATTAATCACGGTTCAGCACCTGAATTACAATTTCA
TCGTTTCAGTAAGTTGTGAGCAAGGGGTCAATGTTTGTAAGTTTTAAGGT
GTGatttgattttaacgtacagttttgaaaatatttaggtaccaatgatc
taattatagcattagtaactttgcagtgaatcgctgttcaaaatttgaga
ccaaaagaactattttataaaaagtcattcaagaaaaccattttgtaggt
tttaaggggtaaaaaTAGCTAAAATCACATTTTTCACGAAGCAATAACAT
TTTTCATAGCAGCTTTATAAAAAGGGGAGAAATTCATAGGTAGCCTAGAT
TCACTAGGAAAAGTTTCAGCCCTTAATGTTTTCTCTATCAGGATAAATGG
AGTATCTTTTAgttgttgtaggttttaaggggtatccactggtaagcagc
taatttcttttgttttgtaattTCAGATTTGAGCAATGAAGTAAAGAATG
TCAAAGATGAAAAAGCTGATAAAAATCAACTTAAaggtttgattttgaaa
tatttcttcaatgataagtaagtatttattttaaagggataagctgctaa
tttctttcatttttttgtgatttcagaTTTGAGCGATGAAGTAAAGAATG
TCAAAGATGAAAAAGCTGATAAAAATCAACTTAAaggtttgattttgaaa
tatttcttcaaTGATAATTTATGCTTTGTTTTATGCCTGCGCAGGGTTTT
TGCTCGTGACGATGAAATTGAGggattcaaaaataaaaaagttgatttaa
gtcaatctgagctgatATTATATGTGTTTTACATACATTGAACTAGAATC
TTTTTACATAAAAAGAATTCTTCATATAATCAAACTATTATGAATCAATC
AATTGGTTAAACTTAACAAAAAGAAATTCCTTTTCGTCTCATTTTCAATT
GATAAACAAAATATTGATCCAAAAACAATAGAGATTATAATGATTTCCAA
TAACACGCCATACTTTCAAAATCCTTTTTCAGCTTTGGAAGATAGAATGA
AGAATTTGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002197XLOC_002197Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003927-exon-sc0000038-1491911889:782794..782996TCONS_00003927-exon-sc0000038-1491911889:782794..782996Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1510915933:782794..782996TCONS_00003927-exon-sc0000038-1510915933:782794..782996Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1575043694:782794..782996TCONS_00003927-exon-sc0000038-1575043694:782794..782996Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1491911889:783834..783856TCONS_00003927-exon-sc0000038-1491911889:783834..783856Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1510915933:783834..783856TCONS_00003927-exon-sc0000038-1510915933:783834..783856Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1575043694:783834..783856TCONS_00003927-exon-sc0000038-1575043694:783834..783856Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1491911889:784007..784043TCONS_00003927-exon-sc0000038-1491911889:784007..784043Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1510915933:784007..784043TCONS_00003927-exon-sc0000038-1510915933:784007..784043Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1575043694:784007..784043TCONS_00003927-exon-sc0000038-1575043694:784007..784043Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1491911889:805870..805929TCONS_00003927-exon-sc0000038-1491911889:805870..805929Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1510915933:805870..805929TCONS_00003927-exon-sc0000038-1510915933:805870..805929Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1575043694:805870..805929TCONS_00003927-exon-sc0000038-1575043694:805870..805929Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1491911889:806276..806303TCONS_00003927-exon-sc0000038-1491911889:806276..806303Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1510915933:806276..806303TCONS_00003927-exon-sc0000038-1510915933:806276..806303Clytia hemisphaericaexon
TCONS_00003927-exon-sc0000038-1575043694:806276..806303TCONS_00003927-exon-sc0000038-1575043694:806276..806303Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:782794..806303 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.12792	7.15376	2.65461	3.63168	43.5908	31.7863	51.916	49.4865	11.6588	15.6506	13.0576	18.6361	13.4145	12.1324	20.5981	26.5581	16.2335	28.7124	11.805	12.9991	22.2938	18.3947	9.79302	12.2009	16.3715	26.8362	21.1837	15.5634	15.4922	14.3001
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003927 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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