|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004018 ID=TCONS_00004018|Name=TCONS_00004018|organism=Clytia hemisphaerica|type=transcript|length=3819bp ATTCATTGAGACATTTTATAATTATTGGAactatttgaaaaaatgaatat ttttgctgttttgtttctttgtttgtGCTTGTTATTATTTGTGAGATGCC AGAAATTGATATCGTGCCCATGCCCCTTTTGTGGGAAAGACTCTAAAGGA CGTGCTGAAGCAAATTGCGCAAACTTCCGATTTTCGACAGTTCGTAAACC ATTCCCGAAGGACATGTATACCATTAATATGCAGTACAATCGAATCAAAG AGGTCAAAACAGACGATTTTGGCGAGTTGCCTGTTTTAAATCTAATAAGA CTAGATGACAATTTGATTGCTAGAATACAAGAAAATGCTTTCGCTGGAAT GTCGAATTTAGACGAATTAGTTTTATCAGCTAATCAATTGAAAACGATCC CAGATAAACTGGTCCATCCAGATGCTCCTTTGAGTCAGGGCATCAAACTG AAAGCCaacaaaattgaacattttccAACGTTGCTTTTAAAACGTACCCG AAGACTTGTTAACGTTGAAGATAACCCAATAAAATGTGATTGTGATTCGG TTATCCCCGATGATATCAAAGATAAAGCACTCGGTACATGTACCTCACCT TCGAATTTGAAAGGTCGTTCCGTGTCAAGTCTAACTTTTTCGGATGTGGG TTGTGATGTTTGTGAGGACGTCGATTGCAACCAAGGCTCGTGTTATACAC TTGATCGTAAAGAAGCCTTGTGTAAATGCTTTGATGGTTGGACAGGTTCA GATTGTTCTATAGATTTAAGCACCACAACCACGACGACGACCACAACCAC AACTACTAAGAAACCCACTACAACCACCACCACAACCACTCCCACCACCA CAACCACTCTTACCACAACCATCCCCACCACCACAACAACTCTCACAACA ACTACTATAACTACCACCACCACTCCCACCACAACCACCACCACTCCCAC CACCACAACCACAGCTACTCCTACCACAACTCCAACTACAACAACTCCTA CCACAACCACAACCACTCCCACCACCACAATCACTCCCACAACAACTACT ATAACTACTACCACCACTCCCACCACAACCACAACCACTCCCAACACAAC CACAACCACTCCCACCACCACAACCACAACCACAACTACTCCCACCACAG CTATCACAACCCCTACCACAACTACAACCACTCCCACCACCACAACCACA ACCATTCCCACTACAACCACAACCACTCCCACCACCACAACGACAACCAC TCCCACTACAACCACAACCACAACCACTCCCACCACAACCACAACCACTC CCACCACAACCACAGCCACTCCCACCACAACCACTCCCACTACAACCACA ACCAATCCCACCACCACAACTACTCCCACCACAACTACGACAACTCCAAC TACAACTTTAACTACTACAACTCCCACCACCACTCCAACCCCAACTACTC CCACCACTCCATCCACAACAACTCCCACCGACACGCTTACCACTTCAACA ATTCCTACCACTACAGCTCCCACAGCCCCCACCACAACCACTACAACCAC GACCAAGAAGACCACATCCATCACCAAGAGACCAACTACAATCACGACCA CCACTCCTAATACCTCTAAGAAGCCCACTACAGTCGTCACTGAGAAACCT GAAACTACGACTGCAATCAAAAAGCTTACTATCGTCACCAAAAAGCCTAC TTTCAGCAGCACAAAAAAGAAGTTCACCACCATCATTGCTTCCACGAAGA AACCTTTGATTAACACTACTAAAAACAAGGAAGCCGAGAAATTAAAAGTG GACTGTGGGAACAAAATAGAATGTCGAGCAACAGTGGAGCGTTTGGTGAA AGATTTAAAATCACTTTCCATTCAAACACCTGAAGAATATGATAAGTTTG CGAAACTTGTTCACAAGATGGTGGACAAAAGTATTGGCAGTGACCACGAT GACTTACAGAAGGTTTTTCCTAAAGTCATCTGTTTGGTGGACATCTTGAT GCAAGTCGACCAATTAATAACGGCCCAGGCCCAACACAAGTACGGGTCCT CTAAGACTCTCCTCAACTCACTCAAGACAATGACCAAAAAAGTCGGAGAT GGCTTCCAGACAAGCGAAAATGTTGAATTCCAAGTCTCAAAAGAAATGGT CGGTATTGGAGTATGGGAGGTCCCTGTGACGGATGAGAAAGATGTTTTTG TGATCGGTGGCTATAGCAACAAGACTTCATATGTTGATATCAAGATTCAA AAGCCATCTCTTGATGATACAAGCATACAAAGTGTTATGAGGATTCCACC AACGGCTTTGAAGGAGCGTCAAAATTCTTACATATCCTCAATCAACTATC AAAATAGTGGACTGTTCCTTACAAAGAACGAATTGAATAATCTGCTGGAT GGAAACGAAAATATAGAAACAAAAGGGAAGAAACACAATATCTCTGATGC ACAAACGAGTAATATCGTAGATGGAAATGTGTTCGCCGTTTCTATTGGTG AAACTTCCATCTCCAACCTCCAACAGCCAATCACGCTTCTCTTTCGTAAT CAAACAGAATTGAAGGCGAATGATACTTGTAAATTCTGGCGTTTCGCGTA TGAGAATGACAGGCATCACGGTCAATGGTCTGACGAAGGATGTCATCGAA TCACAACAACCAACATCACTGGCTTCATCAAATGCCAATGTGATCATCTC ACCAACTTTGCATTGATCATCAATTCTGACCAGGAATTTTACAATCCATA CGCAATTCAGATTGTGACATACGTTGGTTGTGGGATTTCAATCGCTTCTC TCTTCGTCACTCTTCTGGTTTATGTCTTCTTCAGTAAAATCAATCGTAAA CTTGCACCAAAGTTGTTAATCTGTTTATCATCGTCGCTATTGATTCTtct catcattttcatcatcggAGCTGAACGAAACGCCAAGACGTACCACGTGT GCCAGTTGATGGCCGTTTTGATTCACTATTTCACTCTTTCCACTTTCTGT TGGATGGCCTGTGAAAGCTTCAACTTGTATCGAAACttcattaatatttt caaaCGGACCCGTAACGAGAATGGTATACTGGTGAAGATGTCGCTTTTCT CTTGGGGTGTTCCTCTAGTCATCGTTGTCATTACCATGGTAACAAGCCTC GAAGAATATGGCAACGCATATGTatgTGTTGTGCACGGATTCAGTTTTTA CTATGGTGTTCTTTTGCCCGTTGGTTTGATCACCCTTGGCAACTGGATCG TCCTAGTCCTTTCCCTCAGGGGTATGCGAAGAGCGAAGATTCTGAAACGA AGTCGAAGAAAACGCGACCAAGAGAATCAACAGTGGTTACATTTCGTACG CGCCGCTACTTGTGCTACCATCTTGGGTTTGACGTGGACGTTCGGTATTT TAGCAGTGGGTTACCTAAAGACAACTTTCCAATGGTTGTTCTGTATTTTC AACTCGTTGCAAGGGTTCGCCATATTTTTGCTGTTTGTGGTGAATAACAA GGAAGCGAAACGCGAGATCTACAAATGGTACAAGGGAGAACGATTGAATA GCGATAGTGCTGAACTTTCGAGTACTGGAAAACCTGCCtcaaatttttga atgaaatatgCGAGTGAACGAGTGATCATGGAAAAATCTCTATGAGTAAA TATTTTGAGAATTGAAGacaagaaactttttttcaaatcagCAATGTTTT GGCTAAAACTCGTGTAAATTTCTTTCCACGAGAGTTTCTCCCATTTGAAA tagatattttttcataagaagttTTCTTAACCAGACAAGTAAAAAAATTA GTAATTCCTTCCTGTTTTA Run BLAST on NCBI transcript from alignment at sc0000039:238635..244830+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004018 ID=TCONS_00004018|Name=TCONS_00004018|organism=Clytia hemisphaerica|type=transcript|length=6196bp|location=Sequence derived from alignment at sc0000039:238635..244830+ (Clytia hemisphaerica) ATTCATTGAGACATTTTATAATTATTGGAactatttgaaaaaatgaatat
ttttgctgttttgtttctttgtttgtGCTTGTTATTATTTGTGAGATGCC
AGAAATTGATATCGTGCCCATGCCCCTTTTGTGGGAAAGACTCTAAAGGA
CGTGCTGAAGCAAATTGCGCAAACTTCCGATTTTCGACAGTTCGTAAACC
ATTCCCGAAGGACATGTATACCATTAATATGCAGTACAATCGAATCAAAG
AGGTCAAAACAGACGATTTTGGCGAGTTGCCTGTTTTAAATCTAATAAGA
CTAGATGACAATTTGATTGCTAGAATACAAGAAAATGCTTTCGCTGGAAT
GTCGAATTTAGACGAATTAGTTTTATCAGCTAATCAATTGAAAACGATCC
CAGATAAACTGGTCCATCCAGATGCTCCTTTGAGTCAGGGCATCAAACTG
AAAGCCaacaaaattgaacattttccAACGTTGCTTTTAAAACGTACCCG
AAGACTTGTTAACGTTGAAGATAACCCAATAAAATGTGATTGTGATTCGG
TTATCCCCGATGATATCAAAGATAAAGCACTCGGTACATGTACCTCACCT
TCGAATTTGAAAGGTCGTTCCGTGTCAAGTCTAACTTTTTCGGATGTGGG
TTGTGATGTTTGTGAGGACGTCGATTGCAACCAAGGCTCGTGTTATACAC
TTGATCGTAAAGAAGCCTTGTGTAAATGCTTTGATGGTTGGACAGGTTCA
GATTGTTCTATAGATTTAAGCACCACAACCACGACGACGACCACAACCAC
AACTACTAAGAAACCCACTACAACCACCACCACAACCACTCCCACCACCA
CAACCACTCTTACCACAACCATCCCCACCACCACAACAACTCTCACAACA
ACTACTATAACTACCACCACCACTCCCACCACAACCACCACCACTCCCAC
CACCACAACCACAGCTACTCCTACCACAACTCCAACTACAACAACTCCTA
CCACAACCACAACCACTCCCACCACCACAATCACTCCCACAACAACTACT
ATAACTACTACCACCACTCCCACCACAACCACAACCACTCCCAACACAAC
CACAACCACTCCCACCACCACAACCACAACCACAACTACTCCCACCACAG
CTATCACAACCCCTACCACAACTACAACCACTCCCACCACCACAACCACA
ACCATTCCCACTACAACCACAACCACTCCCACCACCACAACGACAACCAC
TCCCACTACAACCACAACCACAACCACTCCCACCACAACCACAACCACTC
CCACCACAACCACAGCCACTCCCACCACAACCACTCCCACTACAACCACA
ACCAATCCCACCACCACAACTACTCCCACCACAACTACGACAACTCCAAC
TACAACTTTAACTACTACAACTCCCACCACCACTCCAACCCCAACTACTC
CCACCACTCCATCCACAACAACTCCCACCGACACGCTTACCACTTCAACA
ATTCCTACCACTACAGCTCCCACAGCCCCCACCACAACCACTACAACCAC
GACCAAGAAGACCACATCCATCACCAAGAGACCAACTACAATCACGACCA
CCACTCCTAATACCTCTAAGAAGCCCACTACAGTCGTCACTGAGAAACCT
GAAACTACGACTGCAATCAAAAAGCTTACTATCGTCACCAAAAAGCCTAC
TTTCAGCAGCACAAAAAAGAAGTTCACCACCATCATTGCTTCCACGAAGA
AACCTTTGATTAACACTACTAAAAACAAGGAAGCCGAGAAAGTAAGTTAT
AATTTCTTTACTGATTCTTTCTAGcgttagcgagcacctcactaaaaact
tggatttttcatctcgtttatttgtgagttccactttgacgattgtcgaa
aaatagaagcctttcaagtgctttgacgcaaattcgattattttgctact
gcagcttcgaaagttaaaatttgacgtcgaaaaatcgaatgtttagagcc
cgaaaacccagGCTCAAAACATNgtgacgtcaaaaaatcgaatatttaga
gcccgaaaaccccggctcaaaacattcgaaaaagtcgcaaagtggaatag
acgttgaTTGCgttaaaaaaacgcgggtgacatctaatttaggctattct
AGCGTCTGTTATGAAAAACTTTCTTATACGtattattttaaagaaatggG
CCATTGGTTATATTTGAGGTCGGCTGTTTAACTTCGGAATCGCTCCCCTT
TTCAGTTAAAAGTGGACTGTGGGAACAAAATAGAATGTCGAGCAACAGTG
GAGCGTTTGGTGAAAGATTTAAAATCACTTTCCATTCAAACACCTGAAGA
ATATGATAAGTTTGCGAAACTTGTTCACAAGATGGTGGACAAAAGTATTG
GCAGTGACCACGATGACTTACAGAAGGTTAGTCTTCCCTTTCGACAACTT
TTTACACGAAGTGTACCACCAAAAATTTGTacacaaaaagtaaaaatacg
TAATAAAGTAAGTCctacaaaatttgaaatatatatttttaatattttat
tcttTAGGTTTTTCCTAAAGTCATCTGTTTGGTGGACATCTTGATGCAAG
TCGACCAATTAATAACGGCCCAGGCCCAACACAAGTACGGGTCCTCTAAG
ACTCTCCTCAACTCACTCAAGACAATGACCAAAAAAGTCGGAGATGGCTT
CCAGACAAGCGAAAATGTTGAATTCCAAGTCTCAAAAGAAATGGTCGGTA
TTGGAGTATGGGAGGTCCCTGTGACGGATGAGAAAGATGTTTTTGTGATC
GGTGGCTATAGCAACAAGACTTCATATGTTGATATCAAGATTCAAAAGCC
ATCTCTTGATGATACAAGCATACAAAGTGTTATGAGGATTCCACCAACGG
CTTTGAAGGAGCGTCAAAATTCTTACATATCCTCAATCAACTATCAAAAT
AGTGGACTGTTCCTTACAAAGAACGAATTGAATAATCTGCTGGATGGAAA
CGAAAATATAGAAACAAAAGGGAAGAAACACAATATCTCTGATGCACAAA
CGAGTAATATCGTAGATGGAAATGTGTTCGCCGTTTCTATTGGTGAAACT
TCCATCTCCAACCTCCAACAGCCAATCACGCTTCTCTTTCGTAATCAAAC
AGAATTGAAGGCGAATGATACTTGTAAATTCTGGCGTTTCGCGTATGGTA
GGTGTNATCAAACAGAATTGGAGGCGAATGATACTTGTAAATTCTGGCGT
TTCGCGTATGGTAGGTGTTCTGAGTATAGTTTTGTAGCAAACTTACATGA
AAACCAACGAAATAGTAAAGCAATGGATTGATAGGAGTAGAAAAGCTTGT
CCAATTTCTTGCTACCTAATTGGTCCTGAAAACCCTACACCCTTCATAAT
ATAGTTAGGGAAGGAAGTAACTTCGTAGAGAAATTCCGAAACAGAATCAA
ACTTAGGACTAATAAAGACAcactaaaaatatatatttcccCCAAAGTAA
TTGGTTGAAATAGACACTTTCTCGGCACTAGAGagtattttaaaataaaa
tttgattattGTCTTGACACACTCTAAACATTTGTTAACCCTCCATTCAT
TAGAGAATGACAGGCATCACGGTCAATGGTCTGACGAAGGATGTCATCGA
ATCACAACAACCAACATCACTGGCTTCATCAAATGCCAATGTGATCATCT
CACCAACTTTGCATTGATCATCAATTCTGACCAGGAATTTTACAATCCAT
ACGCAATTCAGATTGTGACATACGTTGGTTGTGGGATTTCAATCGCTTCT
CTCTTCGTCACTCTTCTGGTTTATGTCTTCTTCAGGTAAGAATCTCTAAC
AGCCAGAAAGGGTTATTATTATTGACTCTTGGATGGAAAATGAGGCCACT
TTTTCCCATCTGAAACGCGTGAaccgcgtggtttttacacaaacacccga
ttgaaagtaaaatcgtAAAATCTTTCGCTAGATTTAGGAAAATATAATGT
GGTAGAACAAAGAAATCATCTTTTGAGACCAAGACTTTTAATTTAAGGTT
CTAACTAACTTCTCACTGGAGTTATGTCGACCAAATACTCTGCTTTCAGG
GGGCCCCTTTGGAATTTTGTAACATAAATTTGATCGAGTTACTTACACAC
TTACTTTTATAAAAACCTGTCAATTACTTTCAATATCTGTTAAGCCGTTC
CCGGCATTGGTAGATAATATCGTGCTTTTAATGTCTAAAATAGTTCTAAA
AGGGTTCTTTGTGACGCAGTGCACGTGAAAAGATGACCCCCAAAGCAGGT
CAACTAAAGATCCTGGAATTTATCTTGCCTGACAATTGCATGCAATTCAT
TTGATTTATTCCAGGATATTCAAGAAGGAAATATCTTGGGAAATCAGATT
TATGAAATGTTTAATTGCAACTCCCtgataaattatttttagtttgtctt
ttgatttcccaaagctttctttctatttttttttatggTGTCCGACCGAT
GTCCGGTATTTAAGCCTGAACATCAATTATGTTTTTTCCTGCTATGTTAT
GTGCCTTGTCACCTGTTCCTTCtaaaaagattatttttgtttgttctttt
gGTTCTTCCTGTTGGCTTATGACTATGTCAAGTTGTTTTGTTTTAATATC
TGATGGTATTGCGCGGGAGGGTAGTTGAAATCATCATTCCCTAATCACTT
TAATACCCGTTatcaaagaaatatatttttcaataatattataatttttt
taactgcTGTGGACAAAGTTTGCTCTTTGCATAAGAGAGCTTGAGGCTGA
TTATAAATTTGTGATATCAGATACAATTAATCTTCCCGTTTCAGTAAAAT
CAATCGTAAACTTGCACCAAAGTTGTTAATCTGTTTATCATCGTCGCTAT
TGATTCTtctcatcattttcatcatcggAGCTGAACGAAACGCCAAGACG
TACCACGTGTGCCAGTTGATGGCCGTTTTGATTCACTATTTCACTCTTTC
CACTTTCTGTTGGATGGCCTGTGAAAGCTTCAACTTGTATCGAAACttca
ttaatattttcaaaCGGACCCGTAACGAGAATGGTATACTGGTGAAGATG
TCGCTTTTCTCTTGGGGTGAGTCTCTCCTAACCTTTGTAGATAGAATCTG
AACTTTTTGCTTCtcctttaaagtttaaagttctcaaacaaatgaaaatg
aaaatttccccTAGCCCTCAAGTAATTAATCTTTCATTTTTTCGTTATTC
TTTCTTTACGTCAGTCTGCATCATCGAAAACACATTTCGCTTCCCACCTC
CTCCTTCCTGTAAACTTCATTCATCATTCTAACTTCACTTGTTTTTCTCT
CCTCTCTTGTATAGGTGTTCCTCTAGTCATCGTTGTCATTACCATGGTAA
CAAGCCTCGAAGAATATGGCAACGCATATGTGTAAGTCTTTTACTCTCCC
CAAGGCTAACCAAGTCGTAATATGGTTGTCTTAGCTCATTCTCGACTTTT
ACCGAGGTTGTACATCAAACCTTTTAAAtttcatcttattttttttctag
atgTGTTGTGCACGGATTCAGTTTTTACTATGGTGTTCTTTTGCCCGTTG
GTTTGATCACCCTTGGCAACTGGATCGTCCTAGTCCTTTCCCTCAGGGGT
ATGCGAAGAGCGAAGATTCTGAAACGAAGTCGAAGAAAACGCGACCAAGA
GAATCAACAGTGGTTACATTTCGTACGCGCCGCTACTTGTGCTACCATCT
TGGGTTTGACGTGGACGTTCGGTATTTTAGCAGTGGGTTACCTAAAGACA
ACTTTCCAATGGTTGTTCTGTATTTTCAACTCGTTGCAAGGGTTCGCCAT
ATTTTTGCTGTTTGTGGTGAATAACAAGGAAGCGAAACGCGAGATCTACA
AATGGTACAAGGGAGAACGATTGAATAGCGATAGTGCTGAACTTTCGAGT
ACTGGAAAACCTGCCtcaaatttttgaatgaaatatgCGAGTGAACGAGT
GATCATGGAAAAATCTCTATGAGTAAATATTTTGAGAATTGAAGacaaga
aactttttttcaaatcagCAATGTTTTGGCTAAAACTCGTGTAAATTTCT
TTCCACGAGAGTTTCTCCCATTTGAAAtagatattttttcataagaagtt
TTCTTAACCAGACAAGTAAAAAAATTAGTAATTCCTTCCTGTTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00004018-exon-sc0000039-1491911889:238635..240425 | TCONS_00004018-exon-sc0000039-1491911889:238635..240425 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1510915933:238635..240425 | TCONS_00004018-exon-sc0000039-1510915933:238635..240425 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1575043694:238635..240425 | TCONS_00004018-exon-sc0000039-1575043694:238635..240425 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1491911889:240890..241060 | TCONS_00004018-exon-sc0000039-1491911889:240890..241060 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1510915933:240890..241060 | TCONS_00004018-exon-sc0000039-1510915933:240890..241060 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1575043694:240890..241060 | TCONS_00004018-exon-sc0000039-1575043694:240890..241060 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1491911889:241192..241831 | TCONS_00004018-exon-sc0000039-1491911889:241192..241831 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1510915933:241192..241831 | TCONS_00004018-exon-sc0000039-1510915933:241192..241831 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1575043694:241192..241831 | TCONS_00004018-exon-sc0000039-1575043694:241192..241831 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1491911889:242238..242469 | TCONS_00004018-exon-sc0000039-1491911889:242238..242469 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1510915933:242238..242469 | TCONS_00004018-exon-sc0000039-1510915933:242238..242469 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1575043694:242238..242469 | TCONS_00004018-exon-sc0000039-1575043694:242238..242469 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1491911889:243479..243750 | TCONS_00004018-exon-sc0000039-1491911889:243479..243750 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1510915933:243479..243750 | TCONS_00004018-exon-sc0000039-1510915933:243479..243750 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1575043694:243479..243750 | TCONS_00004018-exon-sc0000039-1575043694:243479..243750 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1491911889:243999..244065 | TCONS_00004018-exon-sc0000039-1491911889:243999..244065 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1510915933:243999..244065 | TCONS_00004018-exon-sc0000039-1510915933:243999..244065 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1575043694:243999..244065 | TCONS_00004018-exon-sc0000039-1575043694:243999..244065 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1491911889:244185..244830 | TCONS_00004018-exon-sc0000039-1491911889:244185..244830 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1510915933:244185..244830 | TCONS_00004018-exon-sc0000039-1510915933:244185..244830 | Clytia hemisphaerica | exon |
TCONS_00004018-exon-sc0000039-1575043694:244185..244830 | TCONS_00004018-exon-sc0000039-1575043694:244185..244830 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000039 | supercontig | sc0000039:238635..244830 + |
Blast
BLAST of TCONS_00004018 vs. Swiss-Prot (Human)
Match: AGRG4 (Adhesion G-protein coupled receptor G4 OS=Homo sapiens GN=ADGRG4 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 6.225e-35 Identity = 123/381 (32.28%), Postives = 197/381 (51.71%), Query Frame = 1
Query: 2428 KKHNISDAQTSNIVDGNVFAVSIGETSISNLQQPITLLFR----NQTELKANDTCKFWRFAYENDRHHGQWSDEGCHRITTTNITGFIKCQCDHLTNFALIIN---SDQEFYNPYAIQIVTYVGCGISIASLFVTLLVYVFFSKINRKLAPKXXXXXXXXXXXXXXXXXXGAERNA-KTYHVCQLMAVLIHYFTLSTFCWMACESFNLYRNFINIFKRTRNENGILVKMSLFSWGVPLVIVVITMVTSLEEYGN----AYVCVVHGFS-FYYGVLLPVGLITLGNWIVLVLSLRGMRRAKI-LKRSRRKRDQENQQWLHFVRAATCAT-ILGLTWTFGILAVGYLKTTFQWLFCIFNSLQGFAIFLLFVVNNKEAKREIYK 3525
K N++ A T+ +V ++ + I NL P+ + + NQ + + C FW F EN+ G W+ GC ++ TN+ + CQCDHLT+F ++++ S + N + ++TY GCGIS L V ++ Y+ F K+ + K+LI L ++LL+L ++F+I + ++ + VC AV +HYF L +F WM E+ ++Y + +F N IL K L WG+P ++V IT+ + YG C + S FY V+ LI L N + L + K ++++RRK LH ++ T +LGLTW F A G ++ F +LF IFN+LQGF IF+ V KE+ RE ++
Sbjct: 2637 KTKNVTKALTTYVVSASIS----DDMFIQNLADPVVITLQHIGGNQNYGQVH--CAFWDF--ENNNGLGGWNSSGC-KVKETNVN-YTICQCDHLTHFGVLMDLSRSTVDSVNEQILALITYTGCGISSIFLGVAVVTYIAFHKLRKDYPAKILINLCTALLMLNLVFLINSWLSSFQKVGVCITAAVALHYFLLVSFTWMGLEAVHMYLALVKVFN-IYIPNYIL-KFCLVGWGIPAIMVAITVSVKKDLYGTLSPTTPFCWIKDDSIFYISVVAYFCLIFLMNLSMFCTVLVQLNSVKSQIQKTRRK------MILHDLKGTMSLTFLLGLTWGFAFFAWGPMRNFFLYLFAIFNTLQGFFIFVFHCV-MKESVREQWQ 2998
The following BLAST results are available for this feature:
|