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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004178 ID=TCONS_00004178|Name=TCONS_00004178|organism=Clytia hemisphaerica|type=transcript|length=931bp
GCTAGCTATCATGACAAAATGTTTTTCCCCTTATATCATACTGTTTGTTC
CATTATTTTCCTTAGCGAAAGGTCTGAAATGTCTTGACATGTGACGAGAG
CATCTCTAAAGTTACCAAagatttttaattgatttattTAAGACCTTTTG
CGTGAATCTATTTAAAAGTTCAATGAATGATCTTGGTTTTTGATAACATC
AATAACTActtaatcatttaaaaaaaatgttgacCACTACCATTTTTGAG
ATATATATTATTATGAAGTCTCAAAGGGTACgtataaaaatcaataaacg
tTATAACCAAAATAGCtttcttaaaaaattcagtgTTATAAAAGGTTGTA
TAACTGTAACGATTTCATGTTCTCAAGTTAAGCTGATCACGTGAAAAAAA
CATGCATCTGTCCGAAAAAATAAGATAATACCCAGGAATACAATATTATA
AAAGCTCtatgatttgtttttttctgacaaaCGTAATTCACGACTGTCCG
AAATGTTAAGTTGGAAGACAGAAAGCAGTAATTACAtactttgaatatga
ttgatttttcaatttctccgtcaatcattttcataatttccTGTTCACGC
acgtttgaatttttgatattgataaattttcaattattGAAAGCAATTAT
AATGTTAGCTTTAGGTTTTTAAAGTACAGGTCTGGATTGAGCAAGTTTTG
ACTGACTAAGCTAAGCAGAGCTATTTTGTTCGGATGCATAAAAAAATAGT
ACATCATCGAAGCTCTTGTATTGAAGCTGAACATAGCTACTACTGATATT
ATAAAAAGTTCCCCACAGTTAAATCATTGTCATTCTTTTCCAGTTCGAAT
GTCTAATTCTTGAAATTATATCAGCATGAATATTTTAGCGTCTTTTCATT
TCAAGTAATTAACATCTGTGTGATTATGCTA Run BLAST on NCBI transcript from alignment at sc0000039:398849..399779 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004178 ID=TCONS_00004178|Name=TCONS_00004178|organism=Clytia hemisphaerica|type=transcript|length=931bp|location=Sequence derived from alignment at sc0000039:398849..399779 (Clytia hemisphaerica)
TAGCATAATCACACAGATGTTAATTACTTGAAATGAAAAGACGCTAAAAT
ATTCATGCTGATATAATTTCAAGAATTAGACATTCGAACTGGAAAAGAAT
GACAATGATTTAACTGTGGGGAACTTTTTATAATATCAGTAGTAGCTATG
TTCAGCTTCAATACAAGAGCTTCGATGATGTACTATTTTTTTATGCATCC
GAACAAAATAGCTCTGCTTAGCTTAGTCAGTCAAAACTTGCTCAATCCAG
ACCTGTACTTTAAAAACCTAAAGCTAACATTATAATTGCTTTCaataatt
gaaaatttatcaatatcaaaaattcaaacgtGCGTGAACAggaaattatg
aaaatgattgacggagaaattgaaaaatcaatcatattcaaagtaTGTAA
TTACTGCTTTCTGTCTTCCAACTTAACATTTCGGACAGTCGTGAATTACG
tttgtcagaaaaaaacaaatcataGAGCTTTTATAATATTGTATTCCTGG
GTATTATCTTATTTTTTCGGACAGATGCATGTTTTTTTCACGTGATCAGC
TTAACTTGAGAACATGAAATCGTTACAGTTATACAACCTTTTATAAcact
gaattttttaagaaaGCTATTTTGGTTATAacgtttattgatttttatac
GTACCCTTTGAGACTTCATAATAATATATATCTCAAAAATGGTAGTGgtc
aacattttttttaaatgattaagTAGTTATTGATGTTATCAAAAACCAAG
ATCATTCATTGAACTTTTAAATAGATTCACGCAAAAGGTCTTAaataaat
caattaaaaatctTTGGTAACTTTAGAGATGCTCTCGTCACATGTCAAGA
CATTTCAGACCTTTCGCTAAGGAAAATAATGGAACAAACAGTATGATATA
AGGGGAAAAACATTTTGTCATGATAGCTAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004178-exon-sc0000039-1491911889:398849..399779 | TCONS_00004178-exon-sc0000039-1491911889:398849..399779 | Clytia hemisphaerica | exon |
| TCONS_00004178-exon-sc0000039-1510915933:398849..399779 | TCONS_00004178-exon-sc0000039-1510915933:398849..399779 | Clytia hemisphaerica | exon |
| TCONS_00004178-exon-sc0000039-1575043694:398849..399779 | TCONS_00004178-exon-sc0000039-1575043694:398849..399779 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000039 | supercontig | sc0000039:398849..399779 . |
Blast
The following BLAST results are available for this feature:
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