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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004182 ID=TCONS_00004182|Name=TCONS_00004182|organism=Clytia hemisphaerica|type=transcript|length=1616bp
CTCCAGTAAGAAATTTGATAATAACCTGTTTATAAGGAGATAAATCATAC
TTTCGACAAAATCTTTGCATCCCCTCGTCTTCATTTGGTTTGATTTCTAA
CGTTAATTCCAAAGTTTCTTGGATACTATCTCCCTCTATGAAAAGACCCT
CGATGTTCTTCGTGGACGTTATTGAATCACGATTGTGTAAAAGACAAACG
TCTTCAGGTGAAATATCTTGGTGTTGCTCAGCCAATAGCCGTTTCAATTC
TTTCTCATTCGTTTCCAACAAACCTTCCAATTTAGATAACGGACAATCGt
aaaaaatggttggattttcAGGATCTGGGTGTTTTATAACGACCGAACGA
ATACAACTGAGACCTATTTGCTTAGCTCTTTCTGATAACTCTGTTTTTGG
GTCATCGACCTGAACTACGAGTTTGACAGGCAATACTTTCGCATTCTCAG
TCAGATTCCCCTCTCCCTCAATCATGGAATTATTTTGCACTATTCCAAAC
TTTCGTGAGGCTCTTTCCgacaaaaagaatttctcaataTCGTTAGCCGT
TACTCTACAACCATCTACAAAAAGTCGCTGTTTGAGCTTCGGAATTTGTA
ACGAGTTCTCGATGAATACATCCAACTTCTCTTTTCCCCTTCGATAATGA
TATTGCAAGATGTTAGACGTCCCAAAGCCGGATACATTGACTGGTAATAT
TGTCTGTATTCCCAATTTCTGATAAAGAGACGTCAGATTTTTGTCACTGG
TTGAATACACAAACAGCTTTACTCTTACACCCATTCGAGTGTTGCACATA
TGTTCAGGGAACGTTTCACTTTCAATGATATCACATTCTTTAAAATATTC
ATCTAATATTAGCTGCTCTGCGCAAGGTATTTCATAATTTGCTTCGACCC
ATGACTTTAAAGCAGAAATACCAAGAAGCCCGATTTCCAAATATGGGTAA
TGTACCAAAGAATACCTATTTGAATCTGAATAAGGAAGCTCTAGCTTCAC
ACGTTGTAACATATGATGAGAATGGGGggtaaaaaatacttttttttcca
TCATCATGTTTAAATTCAACTCGAGTAACTCACCCTCATTTAAGTCGAGG
AGTAAATCAGCTAACAACTGCTCATCATCCAAAAGTACGCTTGGACTTTT
CTTTGAGCTTAACGCAATAAAGTCACCATCGAGTTTATTGCTCTTGCCGA
TTGTTTTCTTCAAATCTTTCATCGTCAAGTCCGGTTTCGTTTTAAATTCC
ATCGTATTGTTCGGTTTGTGTTCATCATTTTTGGGGATTTCAATTTGAGG
GatttcaatttgaaatgtttCTATCTTCTTACAAATACCCTCTCTCCGCT
GGCTGACGATATTAGGATATGAGTTTGGCTCAGTAATGTCGACATTCAAT
TTGTAATAGTCAACAAATCCACCATACATATACAAAGTTTCTTCATTCAA
AACTTCGTAACGGCTTCTAATGATCTGGTGATCAGGGTGAATGGTGAATC
GTTTTTCGATGTTTTCCTTTAGCTTCTGAAGCGAACCCTCCACATCGTGC
CAATAAAAGATGGATGTTATTAAATTATCTCCAAATTCCACTACAATTCT
GTTTTTCATTTCTCAC Run BLAST on NCBI transcript from alignment at sc0000039:520677..522292 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004182 ID=TCONS_00004182|Name=TCONS_00004182|organism=Clytia hemisphaerica|type=transcript|length=1616bp|location=Sequence derived from alignment at sc0000039:520677..522292 (Clytia hemisphaerica)
GTGAGAAATGAAAAACAGAATTGTAGTGGAATTTGGAGATAATTTAATAA
CATCCATCTTTTATTGGCACGATGTGGAGGGTTCGCTTCAGAAGCTAAAG
GAAAACATCGAAAAACGATTCACCATTCACCCTGATCACCAGATCATTAG
AAGCCGTTACGAAGTTTTGAATGAAGAAACTTTGTATATGTATGGTGGAT
TTGTTGACTATTACAAATTGAATGTCGACATTACTGAGCCAAACTCATAT
CCTAATATCGTCAGCCAGCGGAGAGAGGGTATTTGTAAGAAGATAGaaac
atttcaaattgaaatCCCTCAAATTGAAATCCCCAAAAATGATGAACACA
AACCGAACAATACGATGGAATTTAAAACGAAACCGGACTTGACGATGAAA
GATTTGAAGAAAACAATCGGCAAGAGCAATAAACTCGATGGTGACTTTAT
TGCGTTAAGCTCAAAGAAAAGTCCAAGCGTACTTTTGGATGATGAGCAGT
TGTTAGCTGATTTACTCCTCGACTTAAATGAGGGTGAGTTACTCGAGTTG
AATTTAAACATGATGAtggaaaaaaaagtattttttaccCCCCATTCTCA
TCATATGTTACAACGTGTGAAGCTAGAGCTTCCTTATTCAGATTCAAATA
GGTATTCTTTGGTACATTACCCATATTTGGAAATCGGGCTTCTTGGTATT
TCTGCTTTAAAGTCATGGGTCGAAGCAAATTATGAAATACCTTGCGCAGA
GCAGCTAATATTAGATGAATATTTTAAAGAATGTGATATCATTGAAAGTG
AAACGTTCCCTGAACATATGTGCAACACTCGAATGGGTGTAAGAGTAAAG
CTGTTTGTGTATTCAACCAGTGACAAAAATCTGACGTCTCTTTATCAGAA
ATTGGGAATACAGACAATATTACCAGTCAATGTATCCGGCTTTGGGACGT
CTAACATCTTGCAATATCATTATCGAAGGGGAAAAGAGAAGTTGGATGTA
TTCATCGAGAACTCGTTACAAATTCCGAAGCTCAAACAGCGACTTTTTGT
AGATGGTTGTAGAGTAACGGCTAACGAtattgagaaattctttttgtcGG
AAAGAGCCTCACGAAAGTTTGGAATAGTGCAAAATAATTCCATGATTGAG
GGAGAGGGGAATCTGACTGAGAATGCGAAAGTATTGCCTGTCAAACTCGT
AGTTCAGGTCGATGACCCAAAAACAGAGTTATCAGAAAGAGCTAAGCAAA
TAGGTCTCAGTTGTATTCGTTCGGTCGTTATAAAACACCCAGATCCTgaa
aatccaaccattttttaCGATTGTCCGTTATCTAAATTGGAAGGTTTGTT
GGAAACGAATGAGAAAGAATTGAAACGGCTATTGGCTGAGCAACACCAAG
ATATTTCACCTGAAGACGTTTGTCTTTTACACAATCGTGATTCAATAACG
TCCACGAAGAACATCGAGGGTCTTTTCATAGAGGGAGATAGTATCCAAGA
AACTTTGGAATTAACGTTAGAAATCAAACCAAATGAAGACGAGGGGATGC
AAAGATTTTGTCGAAAGTATGATTTATCTCCTTATAAACAGGTTATTATC
AAATTTCTTACTGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004182-exon-sc0000039-1491911889:520677..522292 | TCONS_00004182-exon-sc0000039-1491911889:520677..522292 | Clytia hemisphaerica | exon |
| TCONS_00004182-exon-sc0000039-1510915933:520677..522292 | TCONS_00004182-exon-sc0000039-1510915933:520677..522292 | Clytia hemisphaerica | exon |
| TCONS_00004182-exon-sc0000039-1575043694:520677..522292 | TCONS_00004182-exon-sc0000039-1575043694:520677..522292 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000039 | supercontig | sc0000039:520677..522292 . |
Blast
The following BLAST results are available for this feature:
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