TCONS_00004406 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004406
Unique NameTCONS_00004406
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length907

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004406 ID=TCONS_00004406|Name=TCONS_00004406|organism=Clytia hemisphaerica|type=transcript|length=907bp
GGTTGATAAAGATATAAAAACCATTTTTGGATGGGTAAAACCAGAGAGAT
TCTACAAAAGTTTGAAAGAGGATGAGACGGAGATGAAGATGTTTTGGGTT
CACATCGTTACTCTTCTGTTATCGGTGGGATCCTCCGAAACTTATATAAT
CCGACACTCAACAAACTCACTTTCCGAAACAGCGAGAAACTTCATCACTG
AGGATGGGGAGTCTGTCAGCAAGCGGAGCAATACTCATAAATGTCCTACG
CCAAATGACGTGACCAGTTTAGACGACGTACGAACTGCAATGGATGCGTC
AGATTATGCTTACTGGGATGATATAAGTGTAGGAAATACGATACAACAAA
CTGGCTTCAAGATAACCCACGTTGAAGGAAATGATGAAACGACATTTCTG
GCGTTTGTAGCTGAATCTGATCAAGCAACACTTGTGGCGTTCAGGGGTAG
CAATGACTTTCAGCAGCTTTCAGATCAATTGGAAACTCAATTCGAAAACA
AAGGCCTTGAAGAAGTAAACTTTCTCGATCGAAGCGTTAAAGTCAATGAA
TATTTCTTACAAGGTACCCGAGAGCTTGTCGCAGGTATCCGACCGAGTAT
AACAAACAATGGGCGGAGATATATTATTACAGGTCATTCACTGGGCGGGG
CGATGGCGTCAATATTTTCTATCATGATGGTTGACGAAGGGAAGAAATTA
TGGGCCGACAACCCAAAGACTGTGTTGATTACATTTGGAGAGCCGAGGGT
TGGAGATGAGGCGTTCGCTAACCTGCATGATGAAGTCATACCAACGTACA
GGAAATTACGAGTAGTCAATGATAGAGATATTGTACCGCATATTCCTCTA
CCACCCGATTACGCCCATCATTCAAGGAAAATACCAAATGATGAATGGAC
AATAAAG
Run BLAST on NCBI

transcript from alignment at sc0000044:261983..277476-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004406 ID=TCONS_00004406|Name=TCONS_00004406|organism=Clytia hemisphaerica|type=transcript|length=15494bp|location=Sequence derived from alignment at sc0000044:261983..277476- (Clytia hemisphaerica)
GGTTGATAAAGATATAAAAACCATTTTTGGATGGGTAAAACCAGAGAGAT
TCTACAAAAGTTTGAAAGGTAAAAGAAAGATGACTGCAAATTTCTGTCTC
TTTATTTTGATTTGTAGCTGATGGAATCTCTTGTTGGTTACTGTAATCTT
ATCTTATCTGAAAATCTCAATACAGAGAAATGGAGATATTTCCAAGAGAG
CAGGCAGAAATGATTGTCGTTAAGTTGATTAAATTTCTCGATTTTTCGCA
AATTTATCCATTTTCGCGGACTTTCAAGCTAATTTTCTTATGACATTATA
CCCATAACAGAACACGCTTTGATGCCAAATGAGTTGTTTATCATATATGT
TTAGAGGATGAGACGGAGATGAAGATGTTTTGGGTTCACATCGTTACTCT
TCTGTTATCGGTGGGATCCTCCGAAACTTATATAATCCGACACTCAACAA
ACTCACTTTCCGAAACAGCGAGAAACTTCATCACTGAGGATGGGGAGTCT
GTCAGCAAGCGGAGCAATACTCATAAATGTCCGTAAGTGAACTAGATACG
CACGTTTTTTTCATAAAATGTACTCTATATAGTATATTCATGATAAAATC
GGCCGAAAACTAAATTTGCAATGTTTATCAAAGTTTATCTCTTTGTCATA
TAAGTTGTCAGGAGACATCTTTTATGAATATCTTTTACGAAATACAATTC
TCAATAACTCTAACGTCATAAAAATTGTAAAGAAAGTTAATCTATATATT
AATACGCTTAAACGTGTGTGTTTACAACATTTTGTAAAAAGTTTTCGAAA
ATCTAACAAAGCTCTACAAAGCCTCCTCTTCAGGGCGTTGAACCATCATC
TTTTTGCACCCTAAGCAGATTTCCTACCACTAGACTAACTTTGAGACCCC
AAGATACTATTTTCTATTCACCAAGTCTTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTTGGAGCTTGATGGGTTAAAATCAACCATCTTCCCAATTTTT
TTTTCTCATTTTAAAGAATTCTTATTCTTAAAACTTTCTGTTTACAATAG
CGGCTCTCTATCACTTTCAAAACTTTTCAAAACATTTTTATATAATATTT
TGTCGCCCGGTTTGAACTTTGGTCTTTTTGATGAATGTGCATTCTTTTAA
ACCAATACAATAGCGGCTCTCTATCACTTTCAAAACTCTATCAAAGTCAC
CCTCGAATGTCCAACCACGATGGCTAGCCACGATGGCTAAAAAGATCTAA
ATTATACTTTTGCTAAGCCATTTATTTAATTGTGGTTAAAAATTACAATG
CAATGTTATCTTCTTTCTCCTTTATTTCTTAAAATCAAAATCAAATCATC
AATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAATCGGCGGCTATCTTTCTTCCGTTAGAATT
TTTTAGATGTGTAGTGATTCACTGGAATGGGACACGCAGCGTGCGACGCT
GCGCATACGGCTAGTTCTTTTTAATCATAATGACTGTTGTGAAAACAATT
ATTGTGTTCGTATATATTGTCTTACATTTTGTTAAACACACGCAATAACC
TTCTACTCAGAATCATGTTTGAACTCGATACTTTTTTTTCCGGACACCCT
AGGCCTCGTTTTAAAAACCATTACCAAGGAGGCCCCCCCAGCGGCACCCC
TAATCACGCCATCACGCCATCACGCAAAAAAATTTTCTCCATCACGCATC
ACGAAAATCGCTAAAATTTGTCATCGCGCAAAAAATGGTGAAAAATAGCC
CAAATCACGCATCACGCCTAAAATTTTTTGCCTTATCACGCATCACGCCA
AAATCTTGATCACGCCATCACGCGAAAAAAATCTCTAATCACGCCATCAC
GCAAGAAAAAGTCCCAATCACGCCATCACGCAAACCGCTGTGGGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCGCGCAAACTTGGGTGGTT
GGGGGGGTGTGAGTCTTCAAGTGACACTTTTATAAATAGTACTTCTAATA
ATATTTCTTACGAACTCCTCTGTGAATCGATTACCATAGCAATATTTTGA
AAACGATGCAAGCGTTGCTCGTGACGTAATTTATGAAATTTTATTTTTAC
GTAGTACGCCAAATGACGTGACCAGTTTAGACGACGTACGAACTGCAATG
GATGCGTCAGATTATGCTTACTGGGATGATATAAGTGTAGGAAATACGAT
ACAACAAACTGGCTTCAAGATAACCCACGTTGAAGGAAATGATGAAACGA
CATTTCTGGCGTTTGTAGCTGAATCTGATCAAGCAACACTTGTGGCGTTC
AGGGGTAGCAATGAGTAAGTAAAACTGTTCAGAACAGAGGCCTTTGCTAC
CGTTAACAATCAAAAGTTCGCTCAACTCAAAAGCGCCAAAATGACAAAAA
TTCGGGTAGTGCTTCGGTGCAGCCACTTTGAAAAAAGACAAAACCAAGCT
GGTACTTTATCCGCGAAAGACTTCTTACAGAGTCGTTTTTTATACGGCCA
ACATGGCTCGTCTGTCAAATTTTCATTTACAGCAGAGAAACGTTTTCATT
TGATTGTTGAGGGAACTTTTAGATTATAATAGCGAGGTTAAGCAAATGTT
TATTTAGATCGTTCAATGCGATACCGTAGGCCTGTACATAAGATTTCACT
TGCATGGTTTGTTTTAGCAAGTTATGTACAGACCTACGGTATCGAACTTT
ACGGTAAAAAAACCCGTAGTAAACCCGTGCTAAACCCGTGCTTAACCTCG
CTAATAACAGGTACGGCTACATTTTTAAAGATCGATATGCGGAGAAGTTA
TCCTGGTTAAATAAATTTTAGGTTGCCATAATGTAATGTAAAGGGTAAAA
AAGTTAAAAATTCATTAAATCCTAGGCTGTACGCATCCCCTCTGATATGT
TTTGATATATGCACGGGATGCATATCGTGTGGCTTCTACACTGCATTTTA
AAATCTGAAACCTTTTTGAAACACGACAAAATCTGCTGTTTTCGGTAAAA
AATTCGTGGTTTTTCTGGTTTTGATTAGGCTGCACCAAAACAATTTGTCG
TGCTTAAAATAATTGAAGTTAGATTAAAATTGAAATTCTCTGTTCACAAT
CATAGATGCTCAATTCCCAAAATAATTGAAATACTAAGTCATAGAATTTC
ACCTAAAATTATGAAGTACAAATGAAGTATAAGCCCGAAGGGCTAGAAGT
CAAACTTTTTGGTAGGATTTGAAGCCAACAAATCTTACCAAAGTTGCGGG
GCCTTGCGCGACCCACCTGGTTTTAACACAAATGACAGATTGAAACTAAA
ATTACCGCTTAATTTCGAAAAAATATCACTCGAAAACAAAGGAATTGCTA
GATTCAATCCGTCATAAAAAATACAGCGTATATTTTAAGGCTTCACTTTT
TCTTGCCTAAGAAAGGTTAAAGATTCTCCTCTAGCCCTTCGGGCTTTAAA
CTCAATGGATTTTACTCTATATAAAAATATGTCTGCTTTTTTTTTGGGAC
AAACTGTATGTTTTGTATGTATTTGACTTTTAGCTTTCAGCAGCTTTCAG
ATCAATTGGAAACTCAATTCGAAAACAAAGGCCTTGAAGAAGTAAACTTT
CTCGATCGAAGCGTTAAAGTCAATGAATATTTCTTACAAGGTAAACCCAA
TCAAAACTCTTATAAAAGGATACCACTGCATCATGACCAAACTCACGACA
GTAAAGCTAAGGCTACCTTAGGGTGTACAAACTTTCGAGATTTTAGTTAA
TAACAGCATGATAATAGTTAATAATAATAAAAATATTGTTTTTGAAAATT
TTTGAACGGCCTATTCACAAAAAATTCTTAACAAGATAGAAATTTTGTAA
AACCTTTTAACTTTAACATAAATAAAATGGGCTCTTCTAGAAAATGTTCG
GATATAGGGGGTGGAAGATATAGTGTCCAGGGGTAGTGAAAAATCTACAA
AATTTGCTTTGTCCAGGGGGTAAACTTGCTCTATTTAGGGGTTATTATAT
TCTGTTTAAGGTTAATTTTAGTTATCAAGGGGGTCAACTGATATCCAGGG
GGTAAATTTCAAGAAAATGTTATATCCTCCACTCTCCATAATCAATTTTT
TTCTGGAAAAGTCCAAAGTAAGATTTGTGCAATTTTTTGGCCTGCTAAAA
CCTCATTAGTCAAATGACAAAAGTTCCAATATAAATCAAAAAGTATGTCT
CTCTGATCTGATACATCATGCGAAGATTTTCATTTCTTGATTCGCTAAAG
TTTATGCTCGCGAAAATTATTTTTTCCTTGAATAAGCAAAAGTTTATGTC
ATAAATTCCGCGATTTTTTGGCCCCGGGACATTTTTTGCTCCCGAAAGTT
GATCTGACAGGTTGTTCAGGTGACTTCAACGTAACGGATCCGATCAATAG
AAAACAAAATTAAACCGATATTCTCGGTCTTGGTTTTCTAGTCATTTTTT
GACATGAAATTTTTCTAGTATAATTTTCCCAGAGAGATAAGTAATAGCTA
TCAATATTTTTCGGGTTCAAAGTTTTCATCAGATTTTCCGAGCCTCTACA
TGAAATTCTTTTTGCAAGTTTTCCTTGAGAAATACATGTAATAGACAATT
TCCCTTTAGGAATACATGTAATGATTTTTGTAAATTTTCCTTAAGAAATA
CATGAAATTCTTTACATGACAATCTTTTCGCAAATTTTCCTTAAGAAATA
CATAAAATTCCTTTTTGCAAATTTTCCTTGAGAAATACATGTAATAAACA
ATTTCCCTTTAAGAATACATGTAACAATTTTTGTAAATTTACCTTAAGAA
ATACATGAAATTCTTTACATGACAATCTTTTCGCAAATTTTCCTTGAGAA
ATACATGAAAATCTACTTTAGGTACCCGAGAGCTTGTCGCAGGTATCCGA
CCGAGTATAACAAACAATGGGCGGAGATATATTATTACAGGTCATTCACT
GGGCGGGGCGATGGCGTCAATATTTTCTATCATGATGGTTGACGAAGGGA
AGGTGAGGTCACACTTTATGTCGAAAAATCAAAACCCAAAGGTTCTTCTC
GTATGTCGTCCTGATAGAGAAAAGTTCTAGACTCTTTGCTCTCGAAATAA
TTAAATCGCCGACCAAAAAGGACAAAAATAGGACCAATCACGAATAAGTT
TTAAATCACGTCTTTACGTATGAAAAAAAACCAATTACTACATCTCGCCA
GGGGGGCTTCCACCACAATAATAAAAAATTTAATTTACGATTTCAATTGG
TGTTTCTAAAAAACTAGGACAAACTAATTTTCGTCTTTCAGAAATTATGG
GCCGACAACCCAAAGACTGTGTTGATTACATTTGGAGAGCCGAGGGTTGG
AGATGAGGCGTTCGCTAACCTGCATGATGAAGTCATACCAACGTACAGGA
AATTACGAGTAGTCAATGATAGAGATATTGTACCGCATATTCCTCTACCA
CCCGATTACGCCCATCATTCAAGGTAATCATTACACAACGCTTTCTCCAG
AAACACCCCGGTTTTTGACAGTCAGTACAGACAAATTCTAAATAATTTTT
ATCTAGCAAATCTAATACTATTATTACAAACAGGGATGTTTCGAAAGCAT
TTTGATCGAATTTTTTTCGAAAAACACACCCTGATGTACCACTAATCGGT
GTGGGTCAAAACATTCATAAATGGAAAATTACATATCATAAATTGACCCA
TATATGGAGTAATGCTTATGTTAGAGTAGCACTTTTCTAAAGCTTCGATC
AAAGATATGGGGGTATAAATAAAATAAAAATTCACTCTGTCATACTAAAA
AGGGTTTTACTTGAAAAAAAGCGAAAATTAAAAGTCAAAGGTCCTCGAAG
GTCACGAATAAACATCCCCTGTTTATATTAGGGACCCCCCGTTTATGTTT
TGCTGACAATATTTGCTACTATCAAAAGCTTGATCGGTCTAAATAGGCAG
GTTTTAGTATACAATTTCCTTATTTTGGGGGTGCAATATCCCACCCCCGA
TAATTAGGCACCTGTAAGTATATTACAGATAATATATGAACATATATGAA
CATACAAAGCTGACAAAAAAGTTTTTATTATCTTACAGGGAAATATTTTT
GTACGGAGTTTGGGTTTGGGAAGGCTGGACATTGAAATGGACTGAAAATC
TGCGCGTTTGTGAGGCTGGAGAAGACGACGAATGTAGTAGCAAGAATTAT
AATTCCTTTGCTAGTTCTATCGTATCTGCCTTCAGTGGTAAAATGGTGAG
TGATCACATGCAGGGGGAATATAAACATAGCCTCACATCATCAAGAAATC
ACCGTTTTGAAATGAGTAACGGTGATGATTGCAGTTCCTTCGAAGATTGT
TTGATTAAATCTTGTGAAAATGATTCACAACAAAATCATAAAAGATCTAC
CAATTCGAATAAAAATGAAAAGAAGCTTGTTAAAGTATTGTTTAACTTGG
AAAAACCTAAGGATTCCAAGTCTCGCCAGGAAAATCGAACATCAAAGACC
AAAAGATACAAACCAAACAAATTGGAAGATATGGAAAGGAATATTTAATG
TATATGTGGAATCCCCTGCTTTTCCCACCTATATAAAAATACTTTTCTCT
ACCAGTCGCAACCATTAAATCAAGTTATTTTTTTCATTTTGTATTAGCAA
CAAGTTCTATATCTTTTAAATCCCTCAAAACAAAGTCCTCCTAATTTTCT
TTTGAGGCTTATTTTTTGTTAAATAGACTATAATTTTTCTTTAATTTGTT
AGTCGAGCTATTATTTCATTAATTATAAAGGAAGAACTTTTTTACAGAAA
GAAAATTGTGATTTACCTGTACCAAATTAAGTTCAGAGGCCAAAACTATT
TTTTTTCGCCATCTGCAAAATCAAAATCCTTCCTATTTTAACTTATTCCG
TACATTACTCTTAGGTTCCAGATAAAGGGGGGGGGGGGGGGAAAATTTTC
GAAATTTTAAAAAACGGGGGGGGCCTAATTGGCGGGGGGGGGGGGAAAAT
TTTCGACATTTTAATAAACGGGGCGGACCTAATTGCCGGGGGGGGTTGGA
AAATTTTCGACATTTTAATAAACGGGGCGGACCTAATTGCCGGGGGGGGT
TGGAAATTGTACTTCGGAAAACCCAAAAATAAGGTAAATATAGGCTAAAA
TCCGGCTATTTAGAGCAAAATAAGCGGATGAGCTGGAGTTTTTACAACGT
CGGCCATGCTTTTTGATGTGTATTTCACAGAACGCAAACACAGAATAAGT
TGAGATATTTAATCTCAATATTCTATCTGAAAAAAAAGAAATTCAGCAAC
CGAATTGAAATATATCAAATTTCTATCAGAAAAATTTTTTTACACTAACC
CAAAGGCCCGAGATCCCGAGGTCCCGAATTATAATATATCAAAATTCTAT
CAGAAAAAAAATTTACATCCACCTAATGTCCCGAGGTCCCGAAGTCCCGA
AATATCAAACTTATGAAAAAAAAATTACACCAACTAAAAGTCCCGAGGTC
CCGAAAGCCCCGAATTGAAATAATATATCAAAATTCTACCAGAAAAAAAA
AATTACACCAACCTAAATTCTCGAAGTCCCGAATGGAAATTTACCAAAGT
ATAGTCTGAAAAAAAGTTACCCCAATCAAAAATCCCAAGGTCCCGAAGTC
CCGATGGAAATATGAAAACTCAAGTAGAAAGAGGAGCGGGGGAAATGACT
GATTGATTAAATTTGATTGGGCAGGAGTGAGGTTGATGAAATAGACAAGG
GTGTAATTTCCACACAAAGTTGGGGAAAGTCGAGTGGAAAGAGGGGAGGA
TTTAGTGAATTTCACATAAAGAAAGATTGGAAATCTATCAAAAGGGGTGG
GGTGAAAGAGAGGCAGAGAAAATAAATGATAAATTGAATACAGTGAGACA
GGGGTGAGATTAATGAAATGGAAAAGGATAAAATTTTCACACAAGGAAGG
AAAACGGGTGGGGTGGATCTAAAGTTGAAAAAGGGCCGAAGAATAAGAAT
GACAGATTAGACATTATGAGACAGGAAATCGGATTGTTGAATTAGACAAG
GGTGGTTTATTCACAAAGGTGAAAACGTGTGGGATGAAACTCAAGCAAAA
AGAGGGACTTTGATGAATGATTGATGAAACACGAGATAAGGGTGAGATGA
CGCGTAAAGAGGGGACAGAGATATACATTAAGACAGAGGTGAGATAGATG
CAAAGGGAGGGTGAGAAAGGGGTGAGATGGATGTAAAGGGAGGTGGCAGA
GATATTATGAAAAGAGTAGGGTAAAAATCAATTAAGACGAGACATGTGTG
GAAACTTTCTCTCTCAGAAATTTGATGTATTTCAATTCGGGACTTTGGGA
CCTCGGGACTTTAGGTTTTTGTAATTTTTTTTCTCAGAAATTTGATTTAT
TGAAATTCGGGACTTCGGGACTTCGGGACCTCGGGACTTTAGGTTAGTGT
AATTTTTTTTGATAGAATTTACATACTTCAATTCGGGACTTCGGGACTTC
GGGACCTCGGGGCTTTTGGTTGGTGTAATTTTTTTTTCTCAGAAATTTGA
TATATTTCAATTCGGGACTTTGGGACCTCGGGACTTAAGGTTGGTGTAGT
TTTTTTTCTCTGAATTTGATTTATTGAAATTCGGGACTTCGGAACTTTAG
GTTGGTGTAATTTTCTTTTTTCAGAAAGTTAATGTATTTCAATTCGGGAC
TTCGGGACTTAGGTATAGTGTGATTTTTTTAAACAGATTCTCGATATTTT
GCTATTCGGGACTTCGGGACTTTGGGTTGGTGTAATATTTTTTTCAGAGA
GTTGATGTATTCCAATTCGGGACTTCGGGACTTGAGTATGGTGTAATTTT
GTTTTTGATAGAATTTCGATATATTCAGTATTTCAATAACTGTAAATTTT
CGAAAAACTAACAAGCGGGGGAGGGGGCCGTTTATTTGGAACCTAAGAGT
ATCCGAATTCTTTCTATTTAAGACCAGTTAAGACCTTAAAGCAATTGTTT
TGCTTATCTAATAACGATTGTATTATATTCCCGCCAATTTTATCTTTATC
AGTCTTGCAAGTTTAAATCCTCTGAAAAAAATTTTTTCGGCCATCCACTA
AATTAAATTCCCGCAAATTTTTTTCCTTCAAGGTAAAAAGTTGGAAAGTC
GTAAATTTATTTAACTTCAATTTAATTGGCCCAGCGCTAGCGATCCTTCA
TAGCGTCATCCTTCCTTCCGCTGTCTGTCCGTCCGTTTTGGTAGAAACGG
CGCTTAAAACCAGTAACACACTTTTTAATTTTGCCGTCTGGAGAGGGAAA
AGCTTGCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAACTAACATGCCTGCATGGATATTTC
TCCCTGCATATGTGAGTGCACCTAATTGGTTAAAAAGCGCCCACTCACTA
TATATTTGCGGGTATTTTTTATATTTTTCTATGGGCGCGCATAATTTATG
GAAATTTTCCACCTAGGACATTTTTATTCCAACCCCCCGTCGCTTATTAA
GTTTTGAGATTTTTTCCAACCTCCCCCCCCGCTGGTAAATCAACTCGGGT
TCAATTTCAGGTGTATCAGGTTCACCCGACCTTACCTGAAATTGCTATTT
TTGGAAGTCCGGTTCGTTTCCAGTAAATCGGGTTAACCCGAATTCACGGG
TTGTTCAGGTTGTTGTTTTTTCGAGTATTTCGGGTTTACCTTAAAAGTCG
GGAAACCCAGGTTAGCACGCGCCTGCGCACCGAGCACTTACCTGAAGAAC
TCGGGTTATTGGACGATTTTGAGTGGTCCTTCGCGTCCGCAAAAATATTT
TTTTCACGATCGAGAATTTAGAGCGCGCTTTTTTTACTTTCTGCGAGAGA
GTTCAAGATGGAAGGTCACGTCACTTCGTACTTCTCATTTACAATTTACT
TTGACAACTGGATGAGGAAAATCGCCTTCAATTTTCCAAAGCCAACGACT
ATGACTGGATGAAGAAAAAAAGGTATGCTTTTATCATTCTTTATTTTCTT
AATAAATTTGTTTGACAGGGCAGGGGAAGTTGGTTTGATTCATGGTTCTT
CTGATCAATCTCTTTTCTCAGCCTCAGAGTGTTCTTTGAACTTAAGTGCC
AAAAATATATCTCAGTTATATTATTTATCTTTACAAGTAAGTCGATAAAG
TAATCCCAATAAATTGTTTCCTGGAAATTTTTAACCTTTAGCTAGAGCTA
GAATCTGAGAGTGTTTTTTTGGGGTGTAACTCACTAGAGTATACGACACC
TTTGGTCTACTTCAACAACAACAGTCGGAATCCAGTGTGGAAATTTGTCT
ACTATGACTGGTTTTTTGTCCGAACACAGTTGCATGATTTGTCATATTAT
GTCTGAAGGCCAACCATCCCAAATAGTCCAGACGTCCGCGCTCGATAGGA
TCGATCATCGGGACGGCTTGATGACGGATCGATATGTGATCGATGGATTA
CTTAACGATCCGGATAGGAGATCGATGGAAGATTCTGCCATTAAAAAGTA
TTGAGTATCGATCCTTCGTTGATCCATTATCGAGCTAGTTTTTCAATCGA
GTATATCATTCGTCATCGATCGTTAATCGATTCGTCATCGATCGTAAATC
GAGTATGAGTCGATAGGGTCGATAAGATCGATAAAAGATCGATGATAGAT
CGGTAAATAATCGATAACTAATCATAAGCTTAAAGAAATCTGAGTATCGA
TCCTCCATCAATCTCCTATCCGGATTGTTAAGTAATCCATCGATCCGTCA
TCGAGCCGTTCCGATGATTGATCCTATCGAGCGCGGATGTCTGGAATAGT
GCATCTCAGAAATCAACAATTCTTCACTGAGGAGTCTTTGGTTTACCAAC
TTTACCAACCGGCAACAAATAATATTATCAACTTCAGTTGAGCTAGAATC
TGAGAATGTCTGTCAGTATGTCCGTGCAGTCTGTCAGTCTGTCACCGCTA
AACTTTGTTTGGGGCAGTGGGCAGGCTGGAGTAATCAAAAATGGTCCAAT
TTAGCTGAAATTTTGCACACTTGTTCCTTGGGTGAATATCTGGGAATACT
TTTTTCACTTTTTCAAAATTTCGATTCTTAGGGGCGTTGTCATGAGTTTT
AGCCTCAAAACGAGGCTAAAAACTTTAGGCAGTCTTGAGAATTCAAAAGA
GGTCCGATTTAGCTGAAATTTTGCACACTTGTTCATTGGGTCAATACCTG
GGAGCTTTTTTTTTCATATTTTCAAAATGTGGACTCTTAGGGGCGTGGTA
ACAAGTTTTAGCCTCAAAACGAGGCTAAAAACTTTGGGGCAGGCTTGAGA
CTTCAAAAATATTCCGATTCAGGTGAAATTTTACACACTTGTTCCTTGGG
TGAATATCTGGGGTATTTTTTCATTTTTTAAAATTTTGATTATTAGGGGC
GTGGTCATGAGTTTTACCCTCAAAACAAGGCTGAAAACTTTAAGGCAAGC
TCAAGACTTTTTTGGATGGGTGTAGCTCAAGAAAGAGAATCCAATAAAAC
ATGCGTACCCTGTTTCCCTCACTCAGGAAAGAACAATATAAAATGAAAAA
TATTTTTTGATATTCATTCTTTTTTGACAGGTTCAACCCCAACAAGAGCT
AAAATTCACAAAGAATTCAAAATTGACAGTTCACTCAGATTACACCTCAA
ATCAAGTAAGTACCGAATGTCTGTTTAACTATTCAGATGTTGAAAGATGC
CTGTTAAACAGATGGCCGAACTGTAAAAATCACAACTTTTGGTCTGTATA
GCTCAGTACATTGAAGGCTGTGAACAAGAATTTGTAGCCTTCCGTAAATT
CTTAAAAAAGTCATTGCTTGAGATTTAAATGGAGTTTGTGGTAACAATTC
AGTAATGAGAAATTCTAATATTTTTTTAGACATGGCCCTTCCAACCATAG
TACCAACTGAATCAAAATTGGAAAGCTGGTGAAAATTCTTCCTCATTTAA
CAAGTAAGTGATTTTTAAATGCGAAGATATTTGGGCGGATGAACAGACCA
ACTATATCATGATATATTCCAGTATACTATTTTTTAGGGAAGCCATTTCA
AGTTCTGAGGCTTTAAAACTTTTGTTTGAGGGCTCTCCAGGGAACTCAGG
CAAGAGGGGGATGTGTCGCAGACCAGAGTTCCTTTTATAAGTCAAGAAAT
ACTTGGGATATTTTAAAACTCACTAAATTTTTGAACACAAGTGACACGCC
AGTGACAGTACCCCTCCCCAGGGAAATTCAGACATTAAATGTATACAATA
ATGGACACCGCTTCAAAACCTTACTGAATTTCCATGACATCATTATTTAT
CATTAATTTTTAAGGTGAAGAAAGTCAATAGAGTTTCCTGACAGCGACAA
ATTCGGTTAACTCAACTCAAATTTGCGATGTTGTTTTCACATTTCTTTTG
CAAAATGAATCTTCAGTCTCAAACACGTTCCCGTGTCTATATTAGATGGT
GACGGCTTCTTGTATAATGTGTTCCAAACAGTTGTTATATCTGGTTATTC
ATGTCAAATGAGTGCAACTGTAATCTGCTTTTGAACTGGAACCTCTTATA
CATTCAACAGGACATGTATGTATCAAGACTCAATTAAAGAACAATCATCT
AAAAGTGATTTTTTCATTCTATGAAATGTGTTAAAGTACTCTCGGTACCT
AATAGCCGCTAATTAATTTTTCGAAAATTTTCCACCCAGGACATTCTTTA
TCAATTTACTTTCATTTTATACTATATTAATTTTATCAAAAATTTTGAAG
GATAAGGTTATCTTCACTTGACACTCCTTTAAGGAAATCAATTTTCATAA
GAGATTCTCATTTTCGCTGACTTTTGTCAGTTCCAAGTCACATTTTTAAA
CATTAGTATTATTATATTTTAAAGTAATATCGCGTTGGAAAGATAATTTT
GAACAGATTGATTTCAGTTCGCTAGGTTTGTTGCAATTATTTCTAACTTA
ACAGTATCACTAAGACTTGCCTCATTAAACCACTCAAAATTATCTTTTGG
ACGAATTTTTAATTTTATTATGACATCTTTCTATCGTTTCTATGATCAAA
AACCAGACGTTACATTAAGTTGATAAAAGAGCCAGTCAACAATTAATTTT
CCCCAAAAAGATCGTTGACAGTCGTTTATTTATAAATCGTGTATTTCGAA
GCTAGATTACTCTTACGCTGTTAAACTGTATTTGTGAATTCTTATGTGAT
TATTCTGAAAATATATCAAATAAAGTAATGCAAAATGTGATGCTTCCTCT
TTTTCCTTGCGGCATTTTAACAAAACAATTTCGAATATGTTTCGCAAAAA
CCACTGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTT
TGGAATTTTTCGACCCGAAATACTCGAGTAAATTGCTCATCGGGATTTTC
GGGTATACCTCACGTCAATTACTTGAGTATTACCCTAGTATTACCCGAGC
TAGTTTACCAGCCCCCCCCGCTATTAGGTACCCGAGAGTATTCAACCGTG
AACCTGCGCCTGTAGACCCGGTTGGAATGGAGACCATTCAATAAAGTTTC
AAGCGTCTAACTATTGAGAAGTACCGCAGTGACTTTGAAAATATTTTTCC
TGTCTTTGATCAACATGGTCATACATTTGCTGTTTTGCACGCTCGTTTTC
AACACGTTACTTTTCGCTGGGCCTTCAGGCCCAACGGGCTTCTTGTTTCA
AAATTCAATTGGGTGATCATAATCAATGAGCTATTCTAGAAAAAATTTTT
GCCTCCTATTTAGAGGAGGTCTTTTTTGGGGGAAAGTTGACCCCTGGATT
TTTTTTCCTATTTCTTCAGGATCCTTTTTTCTCAATTTTTGGACCACCCT
TAACATTTGACCTTTCCACCTCATTTTACTGGCCACCCTGTATTTTTACA
CTCGAAAAACCAGAACCTCCTGGATTTTTTATTTTTCAGACCACCCTGGA
CGTCACAACTCCTCAACATAGGAGGTACAAATTTTCTTTAAATATTTTTC
AATTTATTTTCTTAGATACACTTTTGTAAAAGCCATCAATTATTTGGGAT
GTTATGTTTTAAGGAAAATACCAAATGATGAATGGACAATAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002465XLOC_002465Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004406-exon-sc0000044-1575043694:277409..277476TCONS_00004406-exon-sc0000044-1575043694:277409..277476Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1575043694:276945..277122TCONS_00004406-exon-sc0000044-1575043694:276945..277122Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1575043694:274913..275122TCONS_00004406-exon-sc0000044-1575043694:274913..275122Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1575043694:273587..273693TCONS_00004406-exon-sc0000044-1575043694:273587..273693Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1575043694:272225..272355TCONS_00004406-exon-sc0000044-1575043694:272225..272355Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1575043694:271754..271935TCONS_00004406-exon-sc0000044-1575043694:271754..271935Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1575043694:261983..262013TCONS_00004406-exon-sc0000044-1575043694:261983..262013Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1510915933:277409..277476TCONS_00004406-exon-sc0000044-1510915933:277409..277476Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1510915933:276945..277122TCONS_00004406-exon-sc0000044-1510915933:276945..277122Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1510915933:274913..275122TCONS_00004406-exon-sc0000044-1510915933:274913..275122Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1510915933:273587..273693TCONS_00004406-exon-sc0000044-1510915933:273587..273693Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1510915933:272225..272355TCONS_00004406-exon-sc0000044-1510915933:272225..272355Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1510915933:271754..271935TCONS_00004406-exon-sc0000044-1510915933:271754..271935Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1510915933:261983..262013TCONS_00004406-exon-sc0000044-1510915933:261983..262013Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1491911889:277409..277476TCONS_00004406-exon-sc0000044-1491911889:277409..277476Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1491911889:276945..277122TCONS_00004406-exon-sc0000044-1491911889:276945..277122Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1491911889:274913..275122TCONS_00004406-exon-sc0000044-1491911889:274913..275122Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1491911889:273587..273693TCONS_00004406-exon-sc0000044-1491911889:273587..273693Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1491911889:272225..272355TCONS_00004406-exon-sc0000044-1491911889:272225..272355Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1491911889:271754..271935TCONS_00004406-exon-sc0000044-1491911889:271754..271935Clytia hemisphaericaexon
TCONS_00004406-exon-sc0000044-1491911889:261983..262013TCONS_00004406-exon-sc0000044-1491911889:261983..262013Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:261983..277476 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.068544	0	0	0	0	0	0	0	0.264806	1.08243	0.154223	0.00860623	2.92037	2.35348	0	0	0.334623	0	0.116556	0	0.109143	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004406 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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