TCONS_00004703 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004703
Unique NameTCONS_00004703
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2253

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004703 ID=TCONS_00004703|Name=TCONS_00004703|organism=Clytia hemisphaerica|type=transcript|length=2253bp
CACATTTTTATCTAAAAACCTTTCATTTCACAGTCTATTGATTATGTTTG
TTTTCACTTGTGTCTACCATCTTGAATTAACCCTTATAGTTTAATATAAC
TAATATAAGTTATGTTGGAAATATCTCTAATTGTCTCTATTTCTACTACA
AAGccactccaaaaccatcaagATTTCGAGAATGGCAAAAGAATAGAAAT
GTGATTTTCCTAAAAACAAAGCGAAATTTTggaataagaaaacaaaaatt
gatcaAATGTTCCTTCTGAGAAGAATCAcaaaccttttgaagttttcGAA
CacaaatttattgataaaacaaCAGTGTTTTAGAAGAACTGCACTCCCTC
AGCAAATCTCTAAAGATGTATCATCGTTATTGGGGAAAACATCAGTTGGA
CATTTTCATACCACAACAAAGAAACTATTTAAAGATGAagtGACATTACA
CTTTGTGGATCGAAATGGGACTAAATTGACGATTGAGGCAGAAGTAGGTG
ATAATCTGTTGGATGTGGCAAAGGATGCTGACATTGATGGCGTTGAAGGA
GCATGTGGTGGAACACTGGCTTGTTCTACATGTCATTGTATTTTTCAAGA
AGAAGATTTTGAGAGACTGGGTCTCGAAGACATTGACGAAGATGAATTGG
ATATGTTAGATCTTGCTTTTGGTCTCACTGATACgTCACGTCTAGTATGT
GCTATTGAAGTCACTGAAGAAATGGACGGTATCGAAATTAAAGTTCCCAT
AGCAACCAATGATGCACGTGGTGCCTGATTCCATAGCAGCTAGAGTGAAG
CGGTGTTTCCCAAAGAACAAGCAAGAGAATCAAGTTGCAGAAAACAAAAT
ATGATGTATTGCAAGCTGTAAGAGTAGATAGAGTGAGTAAGGTTTTACTA
ATACTATGAAACACGAATATATGCTCGTTCTGGCTTGTTTTAAGAGGAGG
ATGTTCAATGACAAGGCGAAAACATGAAAGGAGAGAATTCTAGTGACACG
ACATATATAAACACGTTGATAACATGACGAGCACGTGATCTCACCTGACA
ATATGGTAATCCACGTATGTGTAATTTGATGGTATCAATGAACTTTGAAC
CTCGCTTTTTCTCCTCCTTTTCTTAACTTTGCTTGTTACAATAACACACA
TACACATATCTATTAGAACATTATACTATATTCAATTGACCAAGATtatt
tgacctatttttgaatgaatttgatttttggaaTGCTAATTTTCTCCATA
TAATGATACTGCTGATGAAAATTAGGATCAATAAACAGCAAAGCTTCCCT
TATTCTCTCTTGTTTATCATGTATTGAAATATGCTTATGAAAAATGGTCA
TTTGAATAGTACTTAAGACATTTAATAGCAATTTCTACTGCGTATACAAA
TCTCATTCACAAGGTAATTACACAAAAGATGATTGTGGCCGTTTGACGGT
TTGTTAAAGAAAGAAACCTTGCTCATTACTTCATAATTAAATATCTCTTT
CCGCTTTTCACTGTGcttttcctattttttcagCACAGTCAATGACCAGC
TTGCAGTATATTTTTATAACATTTCTTGGTGTCATTTAATGACTTTTGAA
ACTATATTAAAATTACACGTATGCAACTTGAAatgtttattgaaaaattt
gccCCGTGAAAAAGACTAATGCATATTTACTGAGCCATGCCTAAAGGGTC
TGGATTATATCGTTCCGATTTCTGAATTAGGTGTGTCAAGGAGACTCTGT
CACACTTCGTATACATACGCCAATCCTATTACAAAATGCGGTATTTCAAT
TCTCAAATCCAAGTATTCTCCAAGAAACTGCCTCCCCACAGAAAAATGGG
ATTTCCCGGGGATTTATCAGGAAAATAACATTTCATTATCTTTTTTAAGA
TCGTATTATTTGAATTTCATGAGTTCttagaatatattttttctcaaCTT
AACCATACTAGTAGTAGAAAGTGTGGTTTCATCCAAGACTGTTAAAAAGA
TGTAATAAGGTATTAAGAAGCTATTAAGTCAATATTACTTTTCTAAATGA
TTGTGCAAATATGATAGATAAGCTGTTGAAAGATATACATCTATGTCAAA
CTTTGCATGCAATGATGTAAAACACGATGCTTTTGCAAGCTGAAGCTTTT
TGCAGGTTTAAAGCTATAACTAAATTTTTAGTTCTGGAGAATTCAAGGAT
TTTGTAGTTTAAACACAAATCTAATCAATAAAATCCAAATGAATTATTCT
TAA
Run BLAST on NCBI

protein sequence of TCONS_00004703-protein

>TCONS_00004703-protein ID=TCONS_00004703-protein|Name=TCONS_00004703-protein|organism=Clytia hemisphaerica|type=polypeptide|length=173bp
MFLLRRITNLLKFSNTNLLIKQQCFRRTALPQQISKDVSSLLGKTSVGHF
HTTTKKLFKDEVTLHFVDRNGTKLTIEAEVGDNLLDVAKDADIDGVEGAC
GGTLACSTCHCIFQEEDFERLGLEDIDEDELDMLDLAFGLTDTSRLVCAI
EVTEEMDGIEIKVPIATNDARGA
Run BLAST on NCBI

transcript from alignment at sc0000047:674919..682092-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004703 ID=TCONS_00004703|Name=TCONS_00004703|organism=Clytia hemisphaerica|type=transcript|length=7174bp|location=Sequence derived from alignment at sc0000047:674919..682092- (Clytia hemisphaerica)
CACATTTTTATCTAAAAACCTTTCATTTCACAGTCTATTGATTATGTTTG
TTTTCACTTGTGTCTACCATCTTGAATTAACCCTTATAGTTTAATATAAC
TAATATAAGTTATGTTGGAAATATCTCTAATTGTCTCTATTTCTACTACA
AAGCCACTCCAAAACCATCAAGATTTCGAGAATGGCAAAAGAATAGAAAT
GTGATTTTCCTAAAAACAAAGGTACTTTGGCATGTTCTTCACACTGAGAT
AGTTATGTTTTTTTGTGCATAATTTGTTTGTCTCTTTAGTTTGTTTTTAT
TTGATGTTACTATGATGGGAGTATTGATTGTTTGAGTTAAAGCTTTTATT
GTGTACGCCTTTGAAATATCCATATCCAACTCTCTTGGCAATATTGATAT
CACACCATATGCTGTAATAATTTTTACACTATAGCGAAATTTTGGAATAA
GAAAACAAAAATTGATCAAATGTTCCTTCTGAGAAGAATCACAAACCTTT
TGAAGTTTTCGAACACAAATTTATTGATAAAACAACAGTGTTTTAGAAGA
ACTGCACTCCCTCAGCAAATCTCTAAAGATGTATCATCGTTATTGGGGAA
AACATCAGTTGGACATTTTCATACCACAACAAAGAAACTATTTAAAGATG
AGTAAGGATTGTCTTTTTTATTGTGACTTGCCCATGATTATGTTTCCCTG
TGGAAAAGATGTTACTGACCACAATCAATTTCTAGTTTGCCATAAAACCT
TGCAAAGGGTATTTCATTTTGAAAACATAGAACCCTATGTAATTTTTTTC
ACATCTACTAGACACTTGAACACTGGAGAAATTAATTTTTTGTTTTAGAG
TGACATTACACTTTGTGGATCGAAATGGGACTAAATTGACGATTGAGGCA
GAAGTAGGTGATAATCTGTTGGATGTGGCAAAGGATGCTGACATTGATGG
CGTTGAAGGTTTGTCTTTCTGTCTCCCTGTTTATTATTGGAAGACTGAGC
TTGTCTTAGTGTAAATAGAATTTAAATTCCCACTCCTTTCCATAAGTGAG
TTTACGGCACTCTTTCGACCTATTCATTATTCCCTTTTGCAAACATTCGC
ATTCCATCATTGGATTAGGACAAACAAAATTTTCCATTTTAATTCTAGTT
AAATTCTTAAAGCCAATCACAGGGCTCAGACGTCCAATATTAATTTTGTT
CTCCCTCTTCCTTTCGCATTTAGGAGCATGTGGTGGAACACTGGCTTGTT
CTACATGTCATTGTATTTTTCAAGAAGAAGATTTTGAGAGACTGGGTCTC
GAAGACATTGACGAAGATGAATTGGATATGTTAGATCTTGCTTTTGGTCT
CACTGATACGTATGTATATAATTTTTTAGATTGAATATATCTTGCTAAAG
GCATAATCGGGTGGTCTGGGATGTTTGGCATGTAAAATCCTTCCTTCCTT
GTTCTGAGCAAAACCTCAAAATATTTTTTGCCTAAATATTTTCCAAAATT
GATATAATTAAGAACCGTGTGAGAACCCACTTTCACAAATTCTAACTTGT
GATTTGTATCTCGACTTTAGAATATAGTTAGACAAAAATACTTGGTGACT
TTACTCAAAACCACAGAGGGTTTCTTCAGGCAAAAAATCTCAAACCAATT
GATTATCCCTTTAAGGTTAAAAGGATTTAGGATGTTATCTGTCGTCAGGG
TCAGGTGGAATGAAACTGGTGATGAAGTAGTTTTTCTTTGCATTCTTAGC
AATTAAATTCAGGATTAAGGGTAGGGAAAAACCTACCTCAAAAGAACTTT
CTTTTTTTTCCTAAACGACAAACATTTCGGGTAATAAGGCTATTGGTCAA
CTTTTTGATTAAGCTGTTTATACCCCATAGCTTGCATTGAGAGCATAGAC
TTTGATATCCTACCACTATTTTTAATATTTTTTGACATGACTTGGGTCCA
TCAAGATTTGTTACTTAAACCAAAATATCATCTTTCAGGCATACATCAGG
ACCAGAGGGCTGTTTTAAATTTAATAATATCGAAACATTCCTTAAATTTT
TGTTTTAATTTGATTATCAAAGGTGTATCTGGAAAAACTATTCCTTTCTG
ATCCAATCTAATGGTTTGTTATAGGGCTTTGATTTTTCTTCCTTTGTAAA
ATAATATCCGTTTCGCAAATACTTGCCAGTTTCCTATCAGCTCTGATAAC
TGAGAGTGTATTCTTTCCCCTAAACTTTGGTTGTCTCCGTTTTTAACGAA
GCTCTCCAAGGGGACTAAAAAATAAAACAGACTGCTTGGGGACTTCTTTC
GTGAACTCGGTGAGATCTTGGAACTCAATTTCCTAAGGTTGGGTTGCCAT
GTAAAAGAGCATAATTACATAGGAAAGGTTGGTTAAATGTATGAGCGTCT
TGACCCCTGTGAAAACCATATGCAAATTTATCGACAAATAAACAAAGTCA
TAGACATAGCAAATACAACACTGGTGCGTTTTAAGCCGCCCGACGAGCGT
GCGTTCTCAATTATATGAATGGGAATTCTGTAGTAGACACGTTTCTAATC
TTTTTTTGATTTAGAAAAGGCTACTTTTTTTTAAGAAGTCAAATCGACCA
AAAATTTTAAATCTTACCAGATCCCGAACGATTGTTCTGGCCCTTCGCGA
GTGTTTATTCGCCGATTACTGACCCCCGTTGACATCCACTTTTTTAGGTC
CAATCATACTTTCCCTGATACAGTGAACTCTGGGTAATTCGAATTTCTAT
AATCCAAATTTTTCTATAATTACTACAAATTAATTTTGAGTCCCTATCGT
GGAGAAACCTTCGTGAAATGTTTTCCATAATTCGATTCTTTTTGTCATTC
GAACGCGAACAAAATTAGATCTTCCTTTTGAGTATGAATGGGCTTTTCCA
TAAATAGTCCGTGCCCCCCCCCCTCCCCCCTGTTGAGGATATCGGATATC
CAGGGGTTAAACAGTTTTTGTTCAAAAGTGTCTTTTCAAGTGAAAATTAC
GACATCCAGGGGTAAGCATCTTTATTAGAGAGGATATCCAGGGGGTTGAG
CATATTTTTAAGAGTGGATATCAGGGGATCTTTACTAATATGTCTAATAA
AGTAAATCTAGATGTTCGATACTTCGAAAAATCAATATCCTCAACAGTGG
GGGTAAAATGTTTTTCTGGAAAAGCCTAATCGTAACGAATCTCAACTGTA
GTATTTCTTCTTTTATAGGTCACGTCTAGTATGTGCTATTGAAGTCACTG
AAGAAATGGACGGTATCGAAATTAAAGTTCCCATAGCAACCAATGATGCA
CGTGGTGCCTGATTCCATAGCAGCTAGAGTGAAGTAAGTATGTTAGTTTA
CTGTCATTTGTTCTGATTTGTTTGGTATCCTGAAAATAATAATTCCTTAA
ACTACCAAAGTGGCCTTATTCTATGGGTCATTTTTAACAATTCTTTTTCA
AACTTGAACTGGATTATTTTAATCATAGTTTTCAAAAAAATTCTGTTTTG
GAAGCAAGTAGACGTTTTTTTTAAGAACAAACTATATAAGGACATCAGAC
TTCGATGGCCAAAACGTTAAGAACAAGTTAAGAACATTTTAAAGCTGCGG
GGACTCCAAAACACCCGATTTCTTAGAAAAATGGACAAAAATACCCATAA
AATGGAGAAAAATAAGAACATGTTAAAAACATTTTAAGGGTTAGAACTTG
AAAAGTTAAGAACATCTCAAGGCTTCAAAAAATTTGGAGCTTCTTATAAA
AAAACGTGTAGCCGCCTTTAGAGTCTTTTAAAAACGATTATAATATAATA
ATAAAGGCCCCATTACACCTAAGAATAAGGGGGAAGAATATATCTCTGCA
GCTGTTACGATTCGTAAATTCTTGTTCTAGATACACGTAAAAATATTCAA
AAATGGAAAATCTCAGAGTTTTTCCAAATTTGCCATATGTTAATTTTTGT
AAATTCTGCCGTAAAATTACACGGAAGAATGTAAAATTTTTATCAGATTA
ATTTTATTGCAAAGGGCAAAACGGAAGTTCTTTAATTCGATATTTTTCCC
TTTTTTCGAAACCCCCCAACTTTCGAGAGNAGGTGTTTGTAGCAAGAAAT
TCAGGCTCCATGCAACACATTATGCAATAAGCATTTGTTCCGGTTTCTAG
CCTAGATCCTTATAAAAAGCCCAGCATGTACAAGTAGTCAAGGGCGTATT
TTATAAATCAATTTCGAACATATCCCATGACGAAAAGCAAAAAAAAAAAC
GATTAACTTTGTTGTTTATTCAAGTCAAGTAATATAATTACTGCTGCTTG
AGTTAATTGCTTAACCTCATTTTATCATTAATGATTGCATTTTGAATATT
GAACTGCCTTAGGTTTCTCATGATATACATTCATAACAATACAACTTTAA
AGCATTTTCTAACCCCGATAAAAAGTCCGAAATAGGTTTTTATTAGGTTG
GGAATTGGCCTTGAATTAAATTCCATTGGTTCTTAAAGCCTTGTAGTTCT
CGGACAAAATACACGATAGTATATTTATATAAATCATTCGGAATTATTCA
AAAAACATTGAAACAAAAGAAATTGCAACCGAGTCTAAATTATGCCCCTG
ATTCGATAAAAAAAGCTTGATACCTGCTTTGTTTTACTTAAATTGATTAT
GAAAAACAAACAGTGATATTACTTAATTAAAAGTAAGGAGGAAATTTGAT
TTTAACATACTCAACATAACTAGAGTGATGCCTCAAAATTGATTAATTTG
TAAGGAATAATCTTGCGATCAGCCGTACAGATTAAAAAATGTTTCTTATC
AATACCTTACTTTAGATAAAATGTCTTTCAAGACGACAAAAGAAATTGAA
ATATACTATACCGCTTTTTAAACTAAACAATGTTCCAACTTTAAACTAAC
AACGCCAATTTGCTTTGAAGCTTTTATTTTGTACAAAAGGAGCCATCCAG
TCTCCCTACAATTGATTTAGCTCCAAGTCCTATAAGAAACATGTTTAAAA
AATCTCTGAAAATTTGCCACTGCAACCAGAAATCAGCAATTCCTTTAATT
TATCGGGGGGATATACTGTCAGTGTTCTTGTAAAAAGCATTTATGATTTT
AAAGACCTCTATTAATGACATTTCGTGTCATGGTATGATAAGTAAATGTT
AATCTTTTTGTGTGTAATGGTTTACTTATTTTAAACTCATCACGTTATGT
CAAAATCATGCACGAGATGGCGTGATATGAACCATAGCTGAACTAAACTT
CACTGAACAAGTTTTGAATTGAGCCTATTCCAACACGAGAAAATGTAGAG
TGTGTTAGGTTTGGACCCTAAGAATGGCTAAAATGCACACACAAAACTAA
AACCGTTCAACTATACAAGGGAAAAATCTACAGGCGTAGGACATGATTTT
AAGGAAACATACTAGTTGTTTCAAAAAAGCGTACATGTTTTATCGAGATT
CTTCGAAAAACTAGAAAATATATAAATGTAAAACTTTCAGCGTTGTAAAG
AGGAAAGCAAAACTAAATTTTGAAAAATACTTAAATGAGCTCTAGCCGTT
CAAAACCTTTGAAGAAGAAGAAATGTCTCGCCCCTCTGTAGCTATTGCTC
TACTTGACTCGAAGAACATTCGCTTGACTATGATGCACGTTAGACAAGTC
TGAGATACGTTTATTCATGTTTGAAATATACTTAAAGTTACTACTGTAGT
TGTTTTTTTCCTGTTTATAGGCGGTGTTTCCCAAAGAACAAGCAAGAGAA
TCAAGTTGCAGAAAACAAAATATGATGTATTGCAAGCTGTAAGAGTAGAT
AGAGTGAGTAAGGTTTTACTAATACTATGAAACACGAATATATGCTCGTT
CTGGCTTGTTTTAAGAGGAGGATGTTCAATGACAAGGCGAAAACATGAAA
GGAGAGAATTCTAGTGACACGACATATATAAACACGTTGATAACATGACG
AGCACGTGATCTCACCTGACAATATGGTAATCCACGTATGTGTAATTTGA
TGGTATCAATGAACTTTGAACCTCGCTTTTTCTCCTCCTTTTCTTAACTT
TGCTTGTTACAATAACACACATACACATATCTATTAGAACATTATACTAT
ATTCAATTGACCAAGATTATTTGACCTATTTTTGAATGAATTTGATTTTT
GGAATGCTAATTTTCTCCATATAATGATACTGCTGATGAAAATTAGGATC
AATAAACAGCAAAGCTTCCCTTATTCTCTCTTGTTTATCATGTATTGAAA
TATGCTTATGAAAAATGGTCATTTGAATAGTACTTAAGACATTTAATAGC
AATTTCTACTGCGTATACAAATCTCATTCACAAGGTAATTACACAAAAGA
TGATTGTGGCCGTTTGACGGTTTGTTAAAGAAAGAAACCTTGCTCATTAC
TTCATAATTAAATATCTCTTTCCGCTTTTCACTGTGCTTTTCCTATTTTT
TCAGCACAGTCAATGACCAGCTTGCAGTATATTTTTATAACATTTCTTGG
TGTCATTTAATGACTTTTGAAACTATATTAAAATTACACGTATGCAACTT
GAAATGTTTATTGAAAAATTTGCCCCGTGAAAAAGACTAATGCATATTTA
CTGAGCCATGCCTAAAGGGTCTGGATTATATCGTTCCGATTTCTGAATTA
GGTGTGTCAAGGAGACTCTGTCACACTTCGTATACATACGCCAATCCTAT
TACAAAATGCGGTATTTCAATTCTCAAATCCAAGTATTCTCCAAGAAACT
GCCTCCCCACAGAAAAATGGGATTTCCCGGGGATTTATCAGGAAAATAAC
ATTTCATTATCTTTTTTAAGATCGTATTATTTGAATTTCATGAGTTCTTA
GAATATATTTTTTCTCAACTTAACCATACTAGTAGTAGAAAGTGTGGTTT
CATCCAAGACTGTTAAAAAGATGTAATAAGGTATTAAGAAGCTATTAAGT
CAATATTACTTTTCTAAATGATTGTGCAAATATGATAGATAAGCTGTTGA
AAGATATACATCTATGTCAAACTTTGCATGCAATGATGTAAAACACGATG
CTTTTGCAAGCTGAAGCTTTTTGCAGGTTTAAAGCTATAACTAAATTTTT
AGTTCTGGAGAATTCAAGGATTTTGTAGTTTAAACACAAATCTAATCAAT
AAAATCCAAATGAATTATTCTTAA

Coding sequence (CDS) from alignment at sc0000047:674919..682092-

>TCONS_00004703 ID=TCONS_00004703|Name=TCONS_00004703|organism=Clytia hemisphaerica|type=CDS|length=2088bp|location=Sequence derived from alignment at sc0000047:674919..682092- (Clytia hemisphaerica)
GTCACGTCTAGTATGTGCTATTGAAGTCACTGAAGAAATGGACGGTATCG
AAATTAAAGTTCCCATAGCAACCAATGATGCACGTGGTGCCTGAGAGCAT
GTGGTGGAACACTGGCTTGTTCTACATGTCATTGTATTTTTCAAGAAGAA
GATTTTGAGAGACTGGGTCTCGAAGACATTGACGAAGATGAATTGGATAT
GTTAGATCTTGCTTTTGGTCTCACTGATACAGTGACATTACACTTTGTGG
ATCGAAATGGGACTAAATTGACGATTGAGGCAGAAGTAGGTGATAATCTG
TTGGATGTGGCAAAGGATGCTGACATTGATGGCGTTGAAGATGTTCCTTC
TGAGAAGAATCACAAACCTTTTGAAGTTTTCGAACACAAATTTATTGATA
AAACAACAGTGTTTTAGAAGAACTGCACTCCCTCAGCAAATCTCTAAAGA
TGTATCATCGTTATTGGGGAAAACATCAGTTGGACATTTTCATACCACAA
CAAAGAAACTATTTAAAGATGAGTCACGTCTAGTATGTGCTATTGAAGTC
ACTGAAGAAATGGACGGTATCGAAATTAAAGTTCCCATAGCAACCAATGA
TGCACGTGGTGCCTGAGAGCATGTGGTGGAACACTGGCTTGTTCTACATG
TCATTGTATTTTTCAAGAAGAAGATTTTGAGAGACTGGGTCTCGAAGACA
TTGACGAAGATGAATTGGATATGTTAGATCTTGCTTTTGGTCTCACTGAT
ACAGTGACATTACACTTTGTGGATCGAAATGGGACTAAATTGACGATTGA
GGCAGAAGTAGGTGATAATCTGTTGGATGTGGCAAAGGATGCTGACATTG
ATGGCGTTGAAGATGTTCCTTCTGAGAAGAATCACAAACCTTTTGAAGTT
TTCGAACACAAATTTATTGATAAAACAACAGTGTTTTAGAAGAACTGCAC
TCCCTCAGCAAATCTCTAAAGATGTATCATCGTTATTGGGGAAAACATCA
GTTGGACATTTTCATACCACAACAAAGAAACTATTTAAAGATGAGTCACG
TCTAGTATGTGCTATTGAAGTCACTGAAGAAATGGACGGTATCGAAATTA
AAGTTCCCATAGCAACCAATGATGCACGTGGTGCCTGAGAGCATGTGGTG
GAACACTGGCTTGTTCTACATGTCATTGTATTTTTCAAGAAGAAGATTTT
GAGAGACTGGGTCTCGAAGACATTGACGAAGATGAATTGGATATGTTAGA
TCTTGCTTTTGGTCTCACTGATACAGTGACATTACACTTTGTGGATCGAA
ATGGGACTAAATTGACGATTGAGGCAGAAGTAGGTGATAATCTGTTGGAT
GTGGCAAAGGATGCTGACATTGATGGCGTTGAAGATGTTCCTTCTGAGAA
GAATCACAAACCTTTTGAAGTTTTCGAACACAAATTTATTGATAAAACAA
CAGTGTTTTAGAAGAACTGCACTCCCTCAGCAAATCTCTAAAGATGTATC
ATCGTTATTGGGGAAAACATCAGTTGGACATTTTCATACCACAACAAAGA
AACTATTTAAAGATGAGTCACGTCTAGTATGTGCTATTGAAGTCACTGAA
GAAATGGACGGTATCGAAATTAAAGTTCCCATAGCAACCAATGATGCACG
TGGTGCCTGAGAGCATGTGGTGGAACACTGGCTTGTTCTACATGTCATTG
TATTTTTCAAGAAGAAGATTTTGAGAGACTGGGTCTCGAAGACATTGACG
AAGATGAATTGGATATGTTAGATCTTGCTTTTGGTCTCACTGATACAGTG
ACATTACACTTTGTGGATCGAAATGGGACTAAATTGACGATTGAGGCAGA
AGTAGGTGATAATCTGTTGGATGTGGCAAAGGATGCTGACATTGATGGCG
TTGAAGATGTTCCTTCTGAGAAGAATCACAAACCTTTTGAAGTTTTCGAA
CACAAATTTATTGATAAAACAACAGTGTTTTAGAAGAACTGCACTCCCTC
AGCAAATCTCTAAAGATGTATCATCGTTATTGGGGAAAACATCAGTTGGA
CATTTTCATACCACAACAAAGAAACTATTTAAAGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002651XLOC_002651Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004703-exon-sc0000047-1575043694:681872..682092TCONS_00004703-exon-sc0000047-1575043694:681872..682092Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1575043694:681442..681658TCONS_00004703-exon-sc0000047-1575043694:681442..681658Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1575043694:681135..681244TCONS_00004703-exon-sc0000047-1575043694:681135..681244Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1575043694:680734..680869TCONS_00004703-exon-sc0000047-1575043694:680734..680869Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1575043694:678760..678874TCONS_00004703-exon-sc0000047-1575043694:678760..678874Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1575043694:674919..676372TCONS_00004703-exon-sc0000047-1575043694:674919..676372Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1510915933:681872..682092TCONS_00004703-exon-sc0000047-1510915933:681872..682092Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1510915933:681442..681658TCONS_00004703-exon-sc0000047-1510915933:681442..681658Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1510915933:681135..681244TCONS_00004703-exon-sc0000047-1510915933:681135..681244Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1510915933:680734..680869TCONS_00004703-exon-sc0000047-1510915933:680734..680869Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1510915933:678760..678874TCONS_00004703-exon-sc0000047-1510915933:678760..678874Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1510915933:674919..676372TCONS_00004703-exon-sc0000047-1510915933:674919..676372Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1491911889:681872..682092TCONS_00004703-exon-sc0000047-1491911889:681872..682092Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1491911889:681442..681658TCONS_00004703-exon-sc0000047-1491911889:681442..681658Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1491911889:681135..681244TCONS_00004703-exon-sc0000047-1491911889:681135..681244Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1491911889:680734..680869TCONS_00004703-exon-sc0000047-1491911889:680734..680869Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1491911889:678760..678874TCONS_00004703-exon-sc0000047-1491911889:678760..678874Clytia hemisphaericaexon
TCONS_00004703-exon-sc0000047-1491911889:674919..676372TCONS_00004703-exon-sc0000047-1491911889:674919..676372Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004703-proteinTCONS_00004703-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000047supercontigsc0000047:674919..682092 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.79448	3.16513	1.4693	1.61506	15.2145	11.9302	14.3933	14.9163	9.47792	9.34847	6.96365	6.05727	5.19462	5.64642	5.55872	5.72209	7.97427	7.746	4.50202	6.33287	8.70973	9.55254	9.53268	10.0055	8.87048	11.8418	7.18757	5.53718	8.20686	7.77266
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012675Beta-grasp_dom
IPR0010412Fe-2S_ferredoxin-type
IPR018298Adrenodoxin_Fe-S_BS
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0051536iron-sulfur cluster binding
GO:00515372 iron, 2 sulfur cluster binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0051536 iron-sulfur cluster binding
Blast
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BLAST of TCONS_00004703 vs. Swiss-Prot (Human)
Match: ADX (Adrenodoxin, mitochondrial OS=Homo sapiens GN=FDX1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.426e-20
Identity = 61/115 (53.04%), Postives = 81/115 (70.43%), Query Frame = 2 
Query:  431 KDEVTLHFVDRNGTKLTIEAEVGDNLLDVA--KDADIDGVEGACGGTLACSTCHCIFQEEDFXXXXXXXXXXXXXXXXXXAFGLTDTSRLVCAIEVTEEMDGIEIKVPIATNDAR 769
            +D++T+HF++R+G  LT + +VGD+LLDV    + DIDG  GAC GTLACSTCH IF  ED     L+ I ++E DMLDLA+GLTD SRL C I +T+ MD + ++VP    DAR
Sbjct:   64 EDKITVHFINRDGETLTTKGKVGDSLLDVVVENNLDIDGF-GACEGTLACSTCHLIF--EDHIYEKLDAITDEENDMLDLAYGLTDRSRLGCQICLTKSMDNMTVRVPETVADAR 175
The following BLAST results are available for this feature:
BLAST of TCONS_00004703 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADX1.426e-2053.04Adrenodoxin, mitochondrial OS=Homo sapiens GN=FDX1... [more]
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