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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004730 ID=TCONS_00004730|Name=TCONS_00004730|organism=Clytia hemisphaerica|type=transcript|length=1059bp
AATTAAAGGCTGAGAACTAAGTCGAAATTTGGACATACTGGGGATCTCTG
AAGTGTTTGaaaggcaaaaatttgcaatcgtggtccttgggtgaatccct
ggttagtttttcttcattttcaatgtgaTATGATTCAAGGGTGTTGCNAT
GCATCTCTAATAGCACACTGACTATTATTATGCCTCACCCTAGCTGGATC
CCCTGCACTAGTTTCAACATGGTTCAACTATCCCGTTTTTATTTAGactt
tctcaacttcagttgagctatttAGAATTAAAGTGTGTCTGTCAGTGTGT
GGGTGTACGTGGGTGTATGTGCAGATGTCGGTCGTCACCTGGATGCATGC
TCAGGACCTGGGGGTTGGCTGATTTTGCTAAAGTTTGTACATTTAAGCTC
CTTGGGTGAGTCCTTGGGGcattcttcttcattcttcttggGAGTTGGCT
GATTTTGCTNNNNNNNNNNNNNGGTGTTGTAAGCACCTCCAATCTAACTA
GGGAAAACTGTCCATTGGGGGATAATTACTGTGCTCATAGTCAGTTTAGA
GGCATATTACATTTTGTCGCTATCCTTTTAAGCGAGAGTCTTTCTAATTC
ATGAATAAACTTGATTTACcacaaaacttttcattttcgtcATGCTGTCC
Cacagctcaaattttcaacttttcatgccgtcccgcggctcaaaatttca
attttattatgccgtcccgcggcttagctcttcaattttcatgccgtccc
gcggttaaattttcaattttatcatgCTGTCCCGCAGTTTAACTCTTCAA
TTTTATCATGCTACCCTGTGgcttgaattttcattttcaccacATCGTCT
CGCAGCtcaagttttaaaatgttcatgCCACCCCACAACTTAGATTTTCA
ACTTTATTATGCCGTCCCGcggcttatcttttcaatttccatgccaaaaa
ttttaattttatcgtgCCGTCCTGCAGCTCAACTTGCCAACTTTATTATT
ATGCCGTCCCGCGGCTTAGCTCTTCAATTTTCATGCCGTCCCGCGGctta
atttgcaaa Run BLAST on NCBI transcript from alignment at sc0000047:810691..811749 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004730 ID=TCONS_00004730|Name=TCONS_00004730|organism=Clytia hemisphaerica|type=transcript|length=1059bp|location=Sequence derived from alignment at sc0000047:810691..811749 (Clytia hemisphaerica)
tttgcaaattaagCCGCGGGACGGCATGAAAATTGAAGAGCTAAGCCGCG
GGACGGCATAATAATAAAGTTGGCAAGTTGAGCTGCAGGACGGcacgata
aaattaaaatttttggcatggaaattgaaaagataagccgCGGGACGGCA
TAATAAAGTTGAAAATCTAAGTTGTGGGGTGGcatgaacattttaaaact
tgaGCTGCGAGACGATgtggtgaaaatgaaaattcaagcCACAGGGTAGC
ATGATAAAATTGAAGAGTTAAACTGCGGGACAGcatgataaaattgaaaa
tttaaccgcgggacggcatgaaaattgaagagctaagccgcgggacggca
taataaaattgaaattttgagccgcgggacggcatgaaaagttgaaaatt
tgagctgtGGGACAGCATgacgaaaatgaaaagttttgtgGTAAATCAAG
TTTATTCATGAATTAGAAAGACTCTCGCTTAAAAGGATAGCGACAAAATG
TAATATGCCTCTAAACTGACTATGAGCACAGTAATTATCCCCCAATGGAC
AGTTTTCCCTAGTTAGATTGGAGGTGCTTACAACACCNNNNNNNNNNNNN
AGCAAAATCAGCCAACTCccaagaagaatgaagaagaatgCCCCAAGGAC
TCACCCAAGGAGCTTAAATGTACAAACTTTAGCAAAATCAGCCAACCCCC
AGGTCCTGAGCATGCATCCAGGTGACGACCGACATCTGCACATACACCCA
CGTACACCCACACACTGACAGACACACTTTAATTCTaaatagctcaactg
aagttgagaaagtCTAAATAAAAACGGGATAGTTGAACCATGTTGAAACT
AGTGCAGGGGATCCAGCTAGGGTGAGGCATAATAATAGTCAGTGTGCTAT
TAGAGATGCATNGCAACACCCTTGAATCATAtcacattgaaaatgaagaa
aaactaaccagggattcacccaaggaccacgattgcaaatttttgccttt
CAAACACTTCAGAGATCCCCAGTATGTCCAAATTTCGACTTAGTTCTCAG
CCTTTAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004730-exon-sc0000047-1491911889:810691..811749 | TCONS_00004730-exon-sc0000047-1491911889:810691..811749 | Clytia hemisphaerica | exon |
| TCONS_00004730-exon-sc0000047-1510915933:810691..811749 | TCONS_00004730-exon-sc0000047-1510915933:810691..811749 | Clytia hemisphaerica | exon |
| TCONS_00004730-exon-sc0000047-1575043694:810691..811749 | TCONS_00004730-exon-sc0000047-1575043694:810691..811749 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000047 | supercontig | sc0000047:810691..811749 . |
Blast
The following BLAST results are available for this feature:
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