Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004896 ID=TCONS_00004896|Name=TCONS_00004896|organism=Clytia hemisphaerica|type=transcript|length=560bpRun BLAST on NCBI transcript from alignment at sc0000049:134712..141988- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00004896 ID=TCONS_00004896|Name=TCONS_00004896|organism=Clytia hemisphaerica|type=transcript|length=7277bp|location=Sequence derived from alignment at sc0000049:134712..141988- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00004896 vs. Swiss-Prot (Human)
Match: EHMT2 (Histone-lysine N-methyltransferase EHMT2 OS=Homo sapiens GN=EHMT2 PE=1 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 5.688e-37 Identity = 72/180 (40.00%), Postives = 107/180 (59.44%), Query Frame = 3 Query: 18 INVQDHHNRTPLYMAVDKNHMKVAEFLVKAGANIFCQTTEGTNLLHVASRRGNLLAVKWLIKLG-VPANQQDNFGWTALMWCAESDNNSCIIRYLIKQGALTNLLDNEMNICLHWSAIAGSFECARELVSGSSDPQINAKNKFGETPLHVAAKGDHFNVAQFLLLNGADPNIKNKQNCTA 554 IN D RTPL AV NH++VA ++V+ G ++ + +G+ LH A++ GNL V L+ G V N QD+ GWT ++W AE + +IR L+ +GA L DNE NICLHW++ GS A L++ D ++A N G+TPLH+AA+ + + L GA+P ++NK+ TA Sbjct: 711 INAVDKQQRTPLMEAVVNNHLEVARYMVQRGGCVYSKEEDGSTCLHHAAKIGNLEMVSLLLSTGQVDVNAQDSGGWTPIIWAAEHKHIE-VIRMLLTRGADVTLTDNEENICLHWASFTGSAAIAEVLLNARCD--LHAVNYHGDTPLHIAARESYHDCVLLFLSRGANPELRNKEGDTA 887 The following BLAST results are available for this feature:
BLAST of TCONS_00004896 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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