TCONS_00004923 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00004923
Unique Name	TCONS_00004923
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3150

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000049:596728..613409-
coding sequence from alignment at sc0000049:596728..613409-

transcript sequence

>TCONS_00004923 ID=TCONS_00004923|Name=TCONS_00004923|organism=Clytia hemisphaerica|type=transcript|length=3150bp
GCGTGGgccaaaaatctcaaaccatctgatttaAATCACCATAATGTGAA
GCAAACTTATTTTCAAGTACTTCTATGTTTTCATTAGATATCGAAAAACT
ATTTACAGCTCTAAATGTAagtcaattttcatattttaaatAAACTTCGT
GTTTCTCATCATCGTGAAATGGTAAATTCTTAgttcaaattattttgatt
tattttgttcAACGTTTCTCGAAACTTGTTAAATCACTGCTCCGTCATTA
TCATTCGAATCCACCTTCATATTATCTGTTCGCTCATTCGATTCTGACTG
ATTTTCTTCGTTTAGTTGTTGTGACTGTCCACTACCACCATTTGATGTTT
CCACACTCCTTTCTTGCTGTTGTTGGTCCAAATATCGTAAAACGTTCCCC
GATTGCTGTTCATTGTTGTTCAGCATGGAGACCAACTTATTGATAGATCG
ATCATCGTTGGCAGGGATGCTCCTGATGGCACCACGTATTTCATCATCGT
CTCTTTCTCTATCTACTGCTCCATTTTGCGCCGTTTCGACTGGACTGGCA
TTAACAACCTCTTGGTACCGTGTACCTTTATCAGATTCTTGTCGTTGTAC
TGGAACATTCTGGTGGTTGTCAGGGAAACAGACCGCTGGCTTGATGACGT
TGTTTTCCATCATTTCATGTGGTTGAGACACTGGTGGTTCATGCTGTTCG
TCTTCATCAATGTTTATGTTGATGAGATTGCCATGGCTACCTTCTCCTCT
GCTATTGACTTCACTTCTTGATGAAGAAGGTGAGCGGCATCAACGACACT
GACTTGTATGGACGTTTGAGGTGGTGCAACATAAGGAACACCGATCCCGT
TTCGTTGGTGGCTTTCCAATGGCTCTATGGAAGACGAAAAAGAAAACAGA
GTCACTCATCATTTGAGATCGCATGTAGCATCAGAAAGTTGGTCAGCTTT
TTGGAGtttagaACACATTTGATTTCTCAATATGCCATTGGAAAAGAAGA
TCAAAACTCACTTGAGCATCGTGGTCATTGGACATGTCGATTCTGGAAAA
TCTACATCCACTGGTCATCTCATCTATAAATGTGGAGGAATCGATAAAAG
AGCTATCGAAAAGTTCGAAAAAGAAGCTCAAGAAATGGGTAAAGGATCTT
TCAAATATGCTTGGGTTTTGGATAAATTGAAAGCAGAAAGAGAACGTGGT
ATCACCATCGATATTGCcctctggaaatttttctccaaCAAATATGAAAT
TACTATCATTGACGCTCCTGGACATCGAGATTTCATCAAGAATATGATCA
CTGGTACATCACAAGCCGACTGTGCGGTTCTTATCGTGGCTTCGTCTACC
GGTGAATTTGAAGCTGGTATTTCTAAGAATGGACAAACCCGAGAACATGC
CCTACTCGCCTACACTCTTGGCGTGAAGCAGTTGATTGTGGGCGTGAACA
AGATCGACAACACTGAACCGCCCTACAGTGAAACAAGATTCAAAGAAATC
TCCAAAGAGATCGGTACCTACGTCAAGAAGGTCGGTTACAACCCCAAAGC
CGTTGCCATAGTTCCCATTTCTGGTTGGCATGGAGACAACATGATCGAAT
CCTCGACAAATATGTCTTGGTATAAAGGTTGGACAACTGAAGGAACAACA
GAAGAGAAGAAACCATTTAAAGAAAGTGGCAAAACTTTATTGGAAGCTTT
GGACGCCATTCAACCACCCAAACGCCCTGTTTCCAAACCACTCCGTCTAC
CATTACAAGATGTTTACAAAATCGGAGGTATTGGCACCGTTCCCGTCGGT
CGCGTTGAAACTGGCGTCATGAAGCCAGGAATGGTGGTGACTTTTGCACC
TGCAGGCTTATCAACAGAAGTGAAATCGGTAGAAATGCATCACGAGTCGC
TCACTGAAGCTGTCCCTGGTGATAATGTGGGTTTCAAcgtgaaaaatgtt
tcagtaaAAGAAATCAAACGGGGTATGGTTGCTTCTGACAGCAAAAATGA
TCCAGCTAAGGGCGTCGAAAACTTCACTGCTCAAGTGATCATTTTGAACC
ATCCAGGAGAAATTCACGCAGGATACCAACCTGTTCTTGATTGTCATACG
GCTCACGTCGCTTGCAAATTTGCCGTTCTCCAACAGAAAATCGATCGTCG
TTCAGGAAAAGTTTTGGAAGAAAATCCAAAGATGGTGAAATCAGGTGATG
CAGCCATGATCGAGTTAGTTCCTTCGAAACCCATGGTCGTCGAATCTTTC
AGTGATTATGCGCCCCTGGGTAGATTTGCCGTTCGTGACATGCGACAAAC
GGTGGCTGTCGGAGTTATCAAAGCCGTCATGAAGAAGGAGAAAGCCGACG
GAAAATCNCGAGTCGCTCACTGAAGCTGTCCCTGGTGATAATGTGGGTTT
CAAcgtgaaaaatgtttcagtaaAAGAAATCAAACGGGGTATGGTTGCTT
CTGACAGCAAAAATGATCCAGCTAAGGGCGTCGAAAACTTCACTGCTCAA
GTGATCATTTTGAACCATCCAGGAGAAATTCACGCAGGATACCAACCTGT
TCTTGATTGTCATACGGCTCACGTCGCTTGCAAATTTGCCGTTCTCCAAC
AGAAAATCGATCGTCGTTCAGGAAAAGTTTTGGAAGAAAATCCAAAGATG
GTGAAATCAGGTGATGCAGCCATGATCGAGTTAGTTCCTTCGAAACCCAT
GGTCGTCGAATCTTTCAGTGACTATGCACCCCTGGGTAGATTTGCCGTTC
GTGACATGCGACAAACGGTGGCTGTCGGAGTTATCAAAGCCGTCATGAAG
AAGGAGAAAGCCGACGGAAAATCCACCAAATCTGCCACGAAAGCCAGCAA
AAAGAAATGATGTTTATTTTCCAACAAACTACTTCATGTTGTTGTTGCAT
TCAATCAAAATGTTTATCGAACAATCAAATTTCATAGAAAACATTTTCGT
AGGATATcagtgaatttttgaaaaaagaacgaTTTTACGcttgttttatt
atttcaaatttcaaattttgagtgAATTTCCTGACTATTTACAGTGAATT
CGTTGTCGAACTTTGTACTTTTCGTGGAATAGGCATTTTCTTAAATTGTA
CagtacagaaaaaaaaacagttttggCATAACCCATCAAGTCGATCAAGA

Run BLAST on NCBI

protein sequence of TCONS_00004923-protein

>TCONS_00004923-protein ID=TCONS_00004923-protein|Name=TCONS_00004923-protein|organism=Clytia hemisphaerica|type=polypeptide|length=463bp
MPLEKKIKTHLSIVVIGHVDSGKSTSTGHLIYKCGGIDKRAIEKFEKEAQ
EMGKGSFKYAWVLDKLKAERERGITIDIALWKFFSNKYEITIIDAPGHRD
FIKNMITGTSQADCAVLIVASSTGEFEAGISKNGQTREHALLAYTLGVKQ
LIVGVNKIDNTEPPYSETRFKEISKEIGTYVKKVGYNPKAVAIVPISGWH
GDNMIESSTNMSWYKGWTTEGTTEEKKPFKESGKTLLEALDAIQPPKRPV
SKPLRLPLQDVYKIGGIGTVPVGRVETGVMKPGMVVTFAPAGLSTEVKSV
EMHHESLTEAVPGDNVGFNVKNVSVKEIKRGMVASDSKNDPAKGVENFTA
QVIILNHPGEIHAGYQPVLDCHTAHVACKFAVLQQKIDRRSGKVLEENPK
MVKSGDAAMIELVPSKPMVVESFSDYAPLGRFAVRDMRQTVAVGVIKAVM
KKEKADGKXRVAH

Run BLAST on NCBI

transcript from alignment at sc0000049:596728..613409-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00004923 ID=TCONS_00004923|Name=TCONS_00004923|organism=Clytia hemisphaerica|type=transcript|length=16682bp|location=Sequence derived from alignment at sc0000049:596728..613409- (Clytia hemisphaerica)
GCGTGGGCCAAAAATCTCAAACCATCTGATTTAAATCACCATAATGTGAA
GCAAACTTATTTTCAAGTACTTCTATGTTTTCATTAGATATCGAAAAACT
ATTTACAGCTCTAAATGTAAGTCAATTTTCATATTTTAAATAAACTTCGT
GTTTCTCATCATCGTGAAATGGTAAATTCTTAGTTCAAATTATTTTGATT
TATTTTGTTCAACGTTTCTCGAAACTTGTTAAATCACTGCTCCGTCATTA
TCATTCGAATCCACCTTCATATTATCTGTTCGCTCATTCGATTCTGACTG
ATTTTCTTCGTTTAGTTGTTGTGACTGTCCACTACCACCATTTGATGTTT
CCACACTCCTTTCTTGCTGTTGTTGGTCCAAATATCGTAAAACGTTCCCC
GATTGCTGTTCATTGTTGTTCAGCATGGAGACCAACTTATTGATAGATCG
ATCATCGTTGGCAGGGATGCTCCTGATGGCACCACGTATTTCATCATCGT
CTCTTTCTCTATCTACTGCTCCATTTTGCGCCGTTTCGACTGGACTGGCA
TTAACAACCTCTTGGTACCGTGTACCTTTATCAGATTCTTGTCGTTGTAC
TGGAACATTCTGGTGGTTGTCAGGGAAACAGACCGCTGGCTTGATGACGT
TGTTTTCCATCATTTCATGTGGTTGAGACACTGGTGGTTCATGCTGTTCG
TCTTCATCAATGTTTATGTTGATGAGATTGCCATGGCTACCTTCTCCTCT
GCTATTGACTTCACTTCTTGATGAAGAAGGTACGCTTTTTTCCTATTGAT
GAAAAGTTTTTGATATTTTATATACACGCTGTACGAGGGCATAGCCGAAA
ATTCTTGTTGGCAATACCCAATTCTTAGACAAAATATCACATTTCAGAAG
CAAATAAAACTAATCAAGGTTTAAGCCAAAATTTTTTATGGCGTTCGTAT
TTATTGAGTAATTCAAATTCTATGAAAGTATAGGGCTACTTTTCAAGCCA
GCCAAAGGGCGACATTATGGATTCGTAGAAATATTTTTGAAACACATGTT
GAAAATCTCCAAGGAACCTTTTGAAGAGTTTTAACACAGAAGATTTCAAG
TAAGTGGGTTCAAAAAGTTCATTAACAAATTCGTGCAAGTTGAATAGAAC
AAATAAGCCCTTTCTTCTTTGCTAATGACAGTTGATCTACCTGATATCGT
CATTTACTTCAAAATTGACATATATCTGGAATAGTATTTTATGTTGACAT
AGGTCATGTTAAGGTCATTTGTCTTCTTCTCTTATCTTAATTGATAACAG
AGGACTTGCTATTGTCCCTTTCATATTTGTCATACGCCCTCTTAATAGTC
AAAACAGTGTCCTCAAATCTTGCTCTGTCAAAAAGATTAAAGTTGCAAAT
TACGAAACTAGTCACGTTTTAGACCCAAAAGGAGTCAAAATTTACCACGT
AATTATTTTTTCTGTTAAACTTATCGAAAAAATTTTGAAACGATTTGAAA
TCTTTGACCTCGCTACTTTATTTATTTTATTTGTCACAGATCCGCTGGGA
CCCCAGCCCCACTGAAAGATTTGGCAAAAATCCCTTCCCCGTTGGGAAAA
TACTCTGGAATTTCAGCCCCATTGGAAATTGACTTTGATTTCATCCCCAT
TTGAATTCAATGTTTAAAACTTGTTCTCCAAAACCATCCCCACTGGATGT
TTTAAACCTTGAAACAATAGAATTTCAATGTCCATTGGGATTTCAATTTC
TTATCCCGAAAAAGTTCCACCGAGGCTGTGAAACAGTAGTCTGAATCCCA
GACCTCTATAGATAAACCTACATAAAAAACTCTTTTCGCTAGAGAACGAG
CAGAAGCAAAGTGAGACTGGGGTGTTTAAAGGGTCACAGTCTAGGTACCC
CCCCCCCCCCCCCCTCCATCAATTCTAAAGGGGCATATATCCATTTTTAT
GAAATTGAGTTTTTTTTTGCAAGTTTAATCGCGCCTTTGTCCATCTTCAT
GATATTTTTTTCTATCTATTCTGAATCTAACAGTCATTTACTTCATTTTG
ATACGTCATGTTTTACTAGGTTTTGTGATTGTAGCAGTATAAATTAACCC
TTCTCACAAAGCTTAGATTAATTTCAAAGAGCCCTCAACTCATCTAAGCT
GCACGCAATCCTTTCTGATATCTTTTGGTATAGGGGATGGTAATCGTTGA
TAAAATTCCCGTCCGAGATGGCTTGAAACAAACTCAATAAGCTTAAAAAT
GTAACGAAAGCATGCAAAAAAGAATATCGTTACAAGTTTTATAAGATGTT
GCAAATAGATTTTCATTAGCCGCATTGACAGAACATTAAAAAATATGAGA
ATTCGATCTGAGAAACAATCCCTCAGATAAAAATAGTTTTAAAATAGTGC
ATGTAAGAATTATTTTGGCTTCATAGCTCATCTAGATTAGAACTTATGAG
TTTATTAGAGCCCCCCCCCAGCGGTTTGCGTGATGGCGTGATTGGGACTT
TTTTTCTTGCGTGATGGCGTGATTAGAGTTTTTTTTTGGCGTGGTGGCGT
GATCAAGATTTTGGCGTGATGCGTGATAGGGCAAAAATTTGAGGCGTGAT
GCGTGATTTGGGCTATTTTTCGCTATTTTTTGCGTGATGACAAATTTTAG
CGATTTTCGTGATGCGTGATGGAGAAAATTTTTTTTGCGTGGTGGCGTGA
TTAGGGCCGCTGGGGGGCCTCTTATTACGAAACATGAAATAAAACTTAGC
GAAAAACTTGTTAGAGGGGTAAAAGAATAAAAGTAATAGTAGGGGGAAAT
TTGTTCGTTTTTTTTAGGTCGCTCGACTTTTTTAGTCAAAGCACTTGTTA
TACATTTTTGGAAAGCTAAGAGGTAGGGGAATCAAAATAACTTGGGTGCC
AATTTTTTTTCGGACACTTTGGTGTGATTTTCGGACAAATACGACGGTCT
CAGGCAAAAATCATAGGGTAAAAAATTAATGAAAATTTTAGCTTGAGAAA
ACGGAGACCTGTTGTATATTTTTGGAAAGGTCTCAAAAAATTAAGATTAG
TGATATATTGCGAGTATAGGTGATTTCTATACCTAACTCGAGATATTGAT
CCTTAAAAACAGTGTTTTTCAGTGTTTTTCAGCCAGAAACAGCTGTTTTG
TTCAGTTTTTGCGCTTTCGGAAGCTCAATATCTCGAGTTAGGTACTGAAA
TCACCTATACTCGCGATATATCACTAATCTTGATTTTTTGAGAGCTTTGC
AAAAATATACAACAGGTCTCCGTTTTCTCAAGCTAAAATTTTCATTAATT
TTTCACCCTATGATTTTTGCCTGAGACCGTCGTATTTGTCCGAAAATCAC
ACCAAAGTGTCCGAAAGAAAATTGGCACCCAAGTTTTTTTGATTCCCCTA
ACCCTTAGCTTTCCAAAAATGTATAACAAGTGCTTTGACTAAAACAATCG
AGCGATTTTACAAATTTCCCCCTACTATAAGCTCTCTGTTGTACCAGAAA
AGAAGTAGAGCTGATTTTTTCGAATCATGCATTTATTTGTCAACAAGTAA
AAAAATATAATACTGGTCAGTTTTAGCCGAAGGACTTTGAATGTAAAATG
ATTCCTATTATCCCTGTTCCATTCTTATCAAAACTATCATTTTACATTGG
AAAATCCTTCGGTTGAAACTGACAGTAATACACCTTTCTGAAACTTTGAA
CCCCACTGATTTCAAAAGTGAATTCAGATCTCTATAATAGTTCCATTTAG
AGCATTTTTAAGCAATTTCTCACCCATTTGGACCTTTTCAGGAATATTGT
AACTTTTGACCAAAAAAAATATGATTTCTATATTTAGATTTAGATGACGG
ATGACGTTTGCGTTTCAAAAATATTTCGAAAAATTTTCTAATTCGAATAC
CAAAAAGATATGATGAATACCAATTATTAGTCAATATTTGGACCGTTCAA
AAGAATGAGAATTTGAACATCTTGATATTTATAAAAAAATTTTCGAATCA
TACTTTATTTTTCAACAAGTAAAGAAAAATGAATTAATAAAGTTTGTTCA
TTTTCAAATTTTAAGAAGATTTTTAAAATCTTAACAAGCCAGCTGATCAT
AATTATCTTTCCAACGAGGAAAGTTTAAAAATAACGAACTGCCATTTTTT
GGAGCAGTTTTTTTTGCTTCTGCAAGTTTGTTTCTCGAAGGAAAACATCT
TCCATAATTTTCATAACAATGTGCGTAGATTCCCTTTTTTTACCTGTTAA
GACCTTAAGACAGACAGACATGATTTCATTATTTACTTCTTCGGTCCTAA
TTTGCCCGTAGACCCCGAAGAGTTATTATACGCTGTGTTTCCCAAAATCG
TTAAGGATTGAAAAGTCTGTATATGTTTCATGTTTCTTTGTAAAGTTTTC
CTCAAGTGGTCGGTCTACTTTATTTCGAAACAATTTTCTCAGTTAAAACA
TTTTTCGGTCTTTAGAAGTTTCGAGAGAAAATCTAACTAGAGCCTTACCT
GATTTCTTTCAACTTCGTTGCCTCCTTCACACCTTGCGTTTGAACAAATT
CTTTGTAAAGCATCATCTGCTTTCAGGTGAGCGGCATCAACGACACTGAC
TTGTATGGACGTTTGAGGTGGTGCAACATAAGGAACACCGATCCCGTTTC
GTTGGTGGCTTTCCAATGGCTCTATGGAAGACGAAAAAGGTATTCTCTTT
CATGGATAGTCTCTACCCTCTTTTTTATAAGTAGAACTTCATAAGAAGTC
CCCCAGCGGTTTGCGTAAATGCATGAATGGGCTTTTTCACTTGCGTGAAT
ACGTGAAAATTAAAAAAAAAAATGCGTGAATGTGTGAATTGGAAAGCTGT
GAACAAAAAATGCGTGAATTGCGAAAAAACGCTGCGCGAATGCGTGAATT
TGGGGAAAATTGCGTGACAGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGGGGGGGGGGGGGGGTCTCTAAGAACCATAATGCTCAAATCGTC
AAGAAATAAGAACAGGGCGGAGCGTGGAATGGAATTTTAAGTTATGCAAG
GGTCAAAATAATAGGGAAATTGGATCAAAGCTCAATTTTGTCCTAAGAAT
TTAAACAGGATAAAAACAGTTTGAGTCTCAAGAAAAATTCACTTGTTCTC
ACTCACAGAAAAGAATGTATTAGAGGGCGTACGGGGTTTGCGATTTCCGC
AATACCGAATAATTTTGCCAAAATTTCCGAAATTCCGTAAAAAATACTTG
TGATTCCGATACCGATTTTTTGGGTATTTTTCGTCTTTTTGACTAATTTT
TCATCAAATTTGATTTTTCATGTATGAATTCCGAAAAAGGGGGATAAAAA
CTACCGAAATTTCGAAGCAAAAATTCATGGTTTCGTGATTTCCGATACCG
ATACAATTTCAAAATTCCGAATTACCGAAGAAGTTCTGCCCGATTTCCGA
AATTCCGAAAAAAAGGGTCGGTTTTCGCAATTTCGAAATACCGTACGCCT
CCCCCCCCCACGTATTACATACGAAAACCTTAACACGTATAACTTCGAAT
GCAATTACCGGCCCAACATCCACACAGTTTAGAAGTCATAGCGCAAAATC
TGCTGTTTTAGAAGACTGGGCCGAATTTTTGTCGAGGTTTAAGTGTTAAA
GTGTTAAATTTTCAATTTCGCAATGGATCGGTGGTGTTTACCACCCGTTT
GTTAAAAAGCCAAAAAGGAGAGATTTTACTCAAAAGGTGGAATCGGCATA
AGCTCTGCTTTTTCTGGCCACCTGTGTTCATTTTTCTGTATTTTCGTACT
CTTGAAAGGGAGAATTTTAGAGACTTTTGGTAAACCCTTGTGTACCTCGC
CACCACACACAAGTTTTTTACATAATTTCTTTCCTTGCAATAACAAATCT
CAATAAATCACGTGTATACAAGGTAAAGTGTATCCTGGAATGGACTTTGT
CACATGATTTGTCTGGTGATTGGTATATCGCTTATTGACTTATTAGACCG
TTAGACTATCTGCAATGAAGCAACAATAGTGGTGTAATGGGAAATTTAAA
AATACTCTAGTTATACAACTCTGAGTGATAAGTCCTAACTAGTCATTATC
GTACTTCTTTTTATAGGAATATACTATATAAGAATTTTATTGATAAAGTG
TCCAAAAATTAAGAACATGCTAAGAATATCACCATCATAGAATTTGTTAG
CTAGACATATAATACCTATAATTGCCAATTTTAGAGCATTTATTGACAAT
TACCCCCTAAAATGATTAAGAATACCATACCATATTTTTGCCTAAGGTAA
GTATTACATGTTTAAACTGATATACACGTTTTTTTATAAGAACAAACTAT
ATAAGAACATAAGGCTTCGAAGCCCAAAAACCTAAGAACATTCTAAGAAC
ATACTAAGGCTTTGGAGACTTAAAAACATGCAATTTCTTAAGAAATTACA
TCAAAATGCTCAAAAAATGCTGAAAATAAGAACATTCTAAGAACATACTA
AGGCTTTGGAGACTTAAAAACATGCAATTTCTTAAGAAATTACATCAAAA
TGCTCAAAAAATGCTGAAAATAAGAACATTTTAAGAACATTTTTAGGCAT
CAAATCCAAAAAACTAAGAACATTCAAAGGCTTCGAAAATTTTTGACGTT
CTTATAAAAAAAAAACGTGTATTGGGTTTGGATTCTAACCTGAGAATACT
ATAAGAATATTCTAAGATCATTTTCCCTAAGAAGCTAAGAATATACCATG
ATGAAGTTAAAAAGCACCATTCTTATAAAAAAAGTGTGTATTTTATTTTG
ATGGCCACCATGGCCTTTTCCTAATAAAGTATTCATTTTATAATCAATGT
TTATTCTAGTAGAAAAATGTGTCAACTCGAAAATAATCCCATGGTTTTCT
CTCATCAATCAAACTTCTCTCTTTTATACTTACGTAACCATACAGTTGAA
TCAGGCCATTGACATGTGTTATTGGGGAACATGCATGGTTAAACCATGAA
GGGTTTAACTTCAATAATCTGTCCGATTTACGAGCAAGATTGTAAAAATT
TTGAGAAATGAATTTTCATTAAATAATTCTTGTCATTTTCAAAGATACCA
GTGGCTAGCCTGCACCACTATAGTGTAGTACGATATATAAACTTGCGGAT
CACAAAGATAATTCCCTTTTTTATGTGTTTCTCAGTCTTCATGTGTTTTT
ACCGTCAAAAAACGTCCTATAGGTTACAAAATTAGTCCACAATCAGTGCC
ATAATATATTGGTATTTTTGGTTAATTTACCATTTTTCGAAAATTGAAGT
TCGAGCGACAATTTCAGGCCTTCGACTTGATTTCATCAATTATTTCGATA
TGTGAGGGATTTATTGGTTTCTAGGCTATATTTCAAGCCCTAAGGATTAT
TTTTCAGTCTTAAGTCTAGCGTTAAAACTCAGAGTTAAAACTCTACCCTT
CGAACCTACTTTAGAGCACTTACAAATCGATTGTGGTTTCAAAACACCGG
TGAATTTCCCTTTTGTGCCAAGTATTTTGTCACTGATTGCAGATAGTTTT
TCAATAAAGGATCAGAAGGTTGGCATTAGTTTCATTCTGCAGGGTCTGAA
CCATGAAAGTTGTGGACAGAACTTACAACAACCTCCTTCCGATCTGTTAT
TTAGGTCACCAAAATGAAATCATCTTTTAGAACATTGAAAATCTTAATCG
AAAAAAATATGCACTTATTGAAAACCACCTGATCTCTTGAAAGCTTTTCA
TTACTTCCAATTTACATTCCATTAATACTTTAAACTTCCAGAAGTCGTAA
TGCTTATCTAATCTTATGTCAGAAGAACCTGACAGTAATTGGTATTTGGG
TAGTATTCATTTGCTGGCAAGTCATATTGGATTGCTGAGATTGGACAATA
AACCCAAAAAATATCGGGTTAGCAGAAAGAAAAAGTTCTCCTCACCGTTG
TTCGTTTGAAACCATTGCTCTCCATACCGATCATCTGGGTCAACTCTCAC
CCACCTTGATCCACCATCACCACCACCCCCACCACCAAAGTATGGCTGCC
CTTGCTGTCCTGTGATGTAGGTCTTCTTGTGAAGTAGCTGCCCCTTTATC
CTCATTGCTCGCTTCTGTTGTTTGAGCACTGAATTGATTTTATTTTTCGA
TTCTGGGTTTTGTTTGATGTATTGCTTTTGGTGGACCAAATCATTGATTT
TGTTTTGGTTTTGTTTAGATGGTTCTGAATTTTGATCCATGCTTTTTCCT
GGGTTTCTTCTTGAGGAGGATTGTTTAATGTCGGTCTGATCTTGCTCACG
TCGGCTTTCTTGATCTGCACGCTGTTCAAGTTGAGATGGTGGCTGACTTT
TCTTCTGCTCCATTGGTTGTTTTTCATTTGGCTGCTGTTTTGCACCTAGG
TATGTTTGTTGACTTTTTTGTCCATTTTGTTTTTTTTGCGTGCGATCCTT
TGCAAATGTTTTGTTCTTCCATCTGACATGCTGGTTTTTCCTTTTGGTGG
CAGTGATTCCCGATGAACTTGAGTCTATTTTGATCTGCTTATGGAAATGT
TGTTTTGTTTGACGAATCATTCCGTGTCTAAATATTCAGAAAAATGTACA
AGTTGACGAATCAGTATCAGACCTATTCCGATAGAATTGCTTGTGTGTTT
ACTCTAAAAGTTTAGTCGTTTGATAAAACCTTTTGTTTTCTGCAAAGTCA
AAAAAGAAACAATCGGATCGATTTTAGAATTCAGCGGAGTTCTCTATTAC
TCGAAAACGCACAGAAAACGCAAATTTATTCGAGTTAAGGAAATTTCGAG
TCATAGAGTAAGTTTTATGAGGCATTGTTAACCGTAGGGGTCAACAATTT
GCTCGATTTAAGGAGACATTCGAGTTAAGGAGACTCCATTGTATTTATAT
GTCATAGATCAGCTTAATAGAGACATATATTGATTTGCACACACGAAAGA
AAATGAAAATAATCAGCTGATAGATTCTCCCTCACCTTTCAATTTTTGCA
GAAGAGAATCTCAATTTATGTTTAGCTTTCGATTTCCCTTTCTTCTGCTT
CTTCCCTCTCTTCGAATGCTGTTGTTTCGTGGCCAACCGTTCGGTGAAAC
GCCCGAATATGGGTAATTTGTCGACCGCTCTCCTTTTATGTTTTTCACCG
ATCGAGCGTCGTTTTCGAATCTTTCTTTCTCCTTTGTTGTGGAGGTTTCT
TTTGTTGATGTCTGGTTCATCTATTTGAAGTAGCTCCATTAATTCGTTGG
CTATGGTACCAATGGCTTCTTCGTAATCGTTTTGTAATGGTGGTGTTGAG
ATATCCGATTTCTTCATCTTTCTGGCTGCAACTTTATTGGTTTTGTTTTC
TTCTTTGGTCAAGTGTAACTTATGACGATCATCCCCTTCTGTGTTTTTAT
TGTTGCCATTCGCCATGCCAAGCATATGGAAATCTGGATTGGCATAAGGT
GATTGGGCACTCCTACCAATCTTATGGCGAACTTCTGCGTTGGCTTGTGA
GGAATTGTTGCCATTCATTTGATTTTGGTCATCTTGCTTTAATGAATTGT
TTGTTGGTGGAATCGATGTCCTGTTAATCATGTGTGGTGCTCGCCCTTGC
ACATTGAGAACTTCAAACCACTGCAAATTGTAACCAGTGTTCGTCAAGGT
GGTTGTATTTTTTGTTTGATTCTGATATCCCTTTGTATGATTGGATAGTG
TTGTGTTAGTCCCGTCATGCATTGCGTGCGGGGGTCGAACGCTGCTCCTC
ATTGTTGCATTATGAAGTGTTGGGAGACTAGCAAGGTTTTCTGAGATGAG
AAGTATTTGGTGTTTTGCCTTCAACTGAGGACTGTAAAACGTCTGTGGTG
TTTTACTTTGAGACTGGTTTCCCTTCATTGATAAGGGTGAAGGTTGACCC
GATGTTGATCGGCTTGGAGTCTGTTTGTTTGATTTTCTTTGTTCCGATTT
GTTCAGTCGATCTTTGAGTTTCAAAAGTTTTCTCCGGTTGGAAATATATT
TCCTCGTCTGAGGAGGCAAATTCTTGCCAGTGCTGAGAACAGGTGGCTGA
TTTTGTTTCCATAGGCGATCTGGGATCCACGAATTCTGTTCCAGATCGTC
CACTACTGGCGTGAATTCGGTGTGAATGTCATGGAGAGATATCGGTGATG
CAATCATCTCTTTGATTTGTGGCAAATTAAAATCTTCTTTCAACACCAAT
GTAGGATCCAAGATCTCTGGTAACTCTTGTCTTTTGATGGTCGCATAAGG
ATCGTTTTGTTGCTCGGTGGTATTTGCGTTCGTTATGTTCGGATCACTTC
TTTCATTATTATTTTGAATTGCTTGGTGTAAATCTGTTTCTGTTCCGTTG
TTTCCGTTTGTTCCGTTCTCTTGATTTCCACTTATTCCTGTTACATTTCT
TTCTGTGACTTTGTGTGCGTCCGTTCCAACTGTTCCGTTCGCATTGTTAT
CTTCGTGATTTTTGGTTCCATTGGTTGAATCATTGCGTTCACTAGTGTTA
GTGGTGTCATTTGTGCTGTTAGTTAATTCGTTAACCTCGTTCTGGTTTGA
AAGTGAGTCCATCTCTTCCTTTGTATCAGGACCATGACTTCGTTTTCCAT
CATCGTGCGTAGTGACAAAGAAGTCGTTCATCTCTACTTGATCGACCAGA
CTTTTCAATTTGATTTTTATTAAGCGCAAATCATGTTGCGATAGATTCTC
CAATGATCGCCTATGGACAAAATTGACGATGCGATGGATCACTTTCTGTA
TTTCCTTGAGGAGGTGATCTGTGTCAGCTCTGGTGAGATTGGTGTTAGTT
GAGCTAGTGGTGGAATTACCAGTACTGCTCCTCTTGGAAAGGTCATTTGT
TGGTTTGTTCACTTGGTCTTTCTTCCTCAGGTAAAGATAGACATGAGGCC
TTTTGCCAGAAAGGTCGCGAAATTGAAGACGAATTCTTAGATATTTGTGG
TTCTGCTTTACCACATCAATCTTGTCCTCTTTATGTTGTTGTTTCTTCTT
TGTAATCGTTTTGACATGATGGTATTGTTTGTTCATCGTTTTGACAGGAT
GGTATTGTTTGTTCTTCTGATGCTGGACTCTCACATTCTTGGAAGTTTTG
CTTTGATGAAGTCGTTGAGCTTTTCTCCATTGTTTTCTTGGTGCATTTCG
ATTGTTTTTCTGTACTGAAAGTATCGCATCCACTAACAAAAAGAAAAAAA
GCCAGTAAAGAAGTCTCATCTTTCGTCTTTCATTATATTGACGATCGAAA
ACAAATTTCTATAAGATATCTATGTTTCTATTTTTTTGCAACTTTTCTCG
CATTTTGTGACTAATGAAGCATTGCCGATCACAGCAAGGAGCAAGGAGAG
GTTTTTATTTATTCTCACTCCCACTGAGTTGGTTGTTTGTTCTTTATTCT
TATTATACGCAATATGTGTAGCTGAATTTCAATGAGCTGCTGCATTGACA
CTCTCTTCTATTTATCATCTAGCCTCTAAGGATAACTTAAAAAGGAGCAC
TCTGTATAAGCTTGAACTGCGACAACTGCTGGGACACCGTTTTCCTATTT
TTTTTTTGGCAAAAAAGGCGCTAACTAAAAAGGGGTATTGAATTTACATT
GCTCAGATGCTAAAAATGGTCAAAGATTTCATTTTTCAACTTTTAAGTCG
ATTTACTCGTTACTTGCACGACAATATCGTGAAAATTTTTTGATTTTGGA
ATCTACATATACAAATTCGCGAGTCTCCATAAAAAAAATCATATCTCAGA
CATGTATCACGAAAATCGTTTTCTAGCCACTTTTTTGACATCGTCAGCGC
TATTATATTATATATTTCCAATCGCAAAAGTCTTGTGTTACAATCTAATA
TCGCTTCATAAATGAAGATAAAAATTAAATAGTAAAAGTAAATTTCAAGG
TCAAATGAAAAAGGTATGAGAATTACTGACATTTTTTCATGTCATAGGTG
TTCATATAACCCTTGCTTCTGATAGGCCGGCTTCTTAACTAATTCTAGAT
TTCTAAGCCGGGGAGTTTCTAGCAAATCCAGTGAATATGTACTTCAGGCA
GCCAAACGAATCATTAGACCAGCGAATTTTAATTTTTTGATTTCTTTGCT
TGAACCTGCAAAATTCGCCGTTTGCCGGGCCTAAATAATAGCCCTGCTCA
TAGTGAATAAACTTCCCTATTCCACCTATTTTTTAACAAAGCACTAGTAG
CTTTAACAATGTACCTTGGACTACAAAACTTAGTTTTATTTTTAACCCGG
AATGTTCTCTCCTCTGTCATAAAAGAAAGTGGCGCAAAGGTAATAAATCC
AGCTTCGGTGTGCAAGATAGTGGGTTCAAGCCCCATCCGAGTTTTACCAA
TGACTTCGTACTTTGTAAGAAATGGTACTTGATGCTCAGCAATTAAGAAA
AGGATCAAGGTCAGATAAAGCTAACCAGAGCCATCCCCTTCATCCGACTA
GATAACTATCGAAAGAGTAGCCTGCGGGTCCTCTCTGACTCTTACAGACT
CACTCCCTTATAGGGTTGTATGTCGTGCTATTTTTAGATGGTGAATTCGT
TGAAAGCTTCATAAATTGTAATTTTAATGATTTTATGGATGTTATAGACG
ATTGAAAGTTTTTATATGTTCATGGACTGGCCGAGGCTGAAATCAAATTT
AGATTAAAATTTTATTCTACTCTACCAAAAGTCTTGAGTTTATGCTTTTA
TAAAGTTTTAACTTCGCTTATTTAAATGACGTGTTCGGATTTTTTGAGAA
TAATCCCAAGCTTAGACAGACCTCTGAAATTTATAGAAAGTGCTGATTTT
TTTCACTCTTAGCCCCATGTACGGCATGTAGGATCTCAATAACACAAAAA
TGGCACAAAAAACGTAGTGTACTTGTACTGATGGTCTTAGGGAATTTTTT
GAGTGAAAAACGTTAGAGAAAATTGATACAATAATTCTTAAAAAGCGAGT
TTAATAGGTTTATTTTCTCGAACGTCCGTAACACATCCTAAAACCCCTCC
ACAGATGGATAAAGAGTTGCTTTATTAATCTCTCTGTGTCATCTTAATTC
TCAAATGAGAAAGTGCGTATTTGTTCAATTCACACAAATCGATTTTTATA
ATTCCCAAGGGAAATAATCACAATCACTAAAAGAGGAATTTAATGATATC
GCTCCTCCGTTGTGTCTTTTCTTTCGGCGCTCCTCACAATACCATAATTT
TGCGTCTTGTTCCCACGAAGGAGGGTGACCATTTCACCATAACATATAAA
TTCAATGTTTCAGAAAACAGAGTCACTCATCATTTGAGATCGCATGTAGC
ATCAGAAAGTTGGTCAGCTTTTTGGAGGTGAACTTAACTTATTTTGTTGA
TTTTTTTTCTCAATATAAAGCATCGATAGGAGTAGCACTTGAAAACATAT
ACATCTTTGTTCGCATTGAACCTAAAATGTTGTTTATTACCTAAGATTTT
AATGGGTGGATTGTTTGAACCTTCCTTAATTCTTCTACAGTTTTTGATCA
TCAGCCAAACAATCATTTCATTCACCTTACCTTATCTTAAAACTTTTATT
TTTATTTCAGTTTAGAACACATTTGATTTCTCAATATGCCATTGGAAAAG
AAGATCAAAACTCACTTGAGCATCGTGGTCATTGGACATGTCGATTCTGG
AAAATCTACATCCACTGGTCATCTCATCTATAAATGTGGAGGAATCGATA
AAAGAGCTATCGAAAAGTTCGAAAAAGAAGCTCAAGAAATGGGTAAAGGA
TCTTTCAAATATGCTTGGGTTTTGGATAAATTGAAAGCAGAAAGAGAACG
TGGTATCACCATCGATATTGCCCTCTGGAAATTTTTCTCCAACAAATATG
AAATTACTATCATTGACGCTCCTGGACATCGAGATTTCATCAAGAATATG
ATCACTGGTACATCACAAGCCGACTGTGCGGTTCTTATCGTGGCTTCGTC
TACCGGTGAATTTGAAGCTGGTATTTCTAAGAATGGACAAACCCGAGAAC
ATGCCCTACTCGCCTACACTCTTGGTAAGGTTTTTTTGGGAATTTTATAA
AAAGAAATGTGTAATCTTAAACTTGATGAATAAAGTGATGAATAAATTCG
ATTTATATCCCCTTCTGAGGCAGCTCTCTTACTCAATCAACTATTTTTTA
AATGTAATAAACCAATTTCATCAGTTCCTTGTTATTTCTTGTGGGTAGTG
CGTTATTCACTTTTCTTACAAGCAAGTCTTGCAATTTCAAATCTCTGAAA
AGTATTGCGTTTATGCGTTCTATGTGTAAACATCTTTTTATAATTTACAG
GCGTGAAGCAGTTGATTGTGGGCGTGAACAAGATCGACAACACTGAACCG
CCCTACAGTGAAACAAGATTCAAAGAAATCTCCAAAGAGATCGGTACCTA
CGTCAAGAAGGTCGGTTACAACCCCAAAGCCGTTGCCATAGTTCCCATTT
CTGGTTGGCATGGAGACAACATGATCGAATCCTCGACAAATATGTCTTGG
TATAAAGGTTGGACAACTGAAGGAACAACAGAAGAGAAGAAACCATTTAA
AGAAAGTGGCAAAACTTTATTGGAAGCTTTGGACGCCATTCAACCACCCA
AACGCCCTGTTTCCAAACCACTCCGTCTACCATTACAAGATGTTTACAAA
ATCGGAGGTATTGGCACCGTTCCCGTCGGTCGCGTTGAAACTGGCGTCAT
GAAGCCAGGAATGGTGGTGACTTTTGCACCTGCAGGCTTATCAACAGAAG
TGAAATCGGTAGAAATGCATCACGAGTCGCTCACTGAAGCTGTCCCTGGT
GATAATGTGGGTTTCAACGTGAAAAATGTTTCAGTAAAAGAAATCAAACG
GGGTATGGTTGCTTCTGACAGCAAAAATGATCCAGCTAAGGGCGTCGAAA
ACTTCACTGCTCAAGTAAGAAAATTCAATATTTCTTTTTTTTCCTAGGTC
AATTTGATTGACATTCACTCGTTTGAAAGAAAAGTCAGATTTGGCTTTAT
TTTTAAGAGCAATAACATCTTATCAATGCTGTTACTTGTTTATTGGACTT
TGTTAAACGAGTGCCAACTCTGTCTCGCTTATAAATTGCATTACAACTTG
CAAAATAATTCAATACGTTTACAGTGTCTTACAAGAGCTCACTCAAATAT
TGGTTGGAATTCAAAATTGTTCTCGTTTGTTCATTCATAGGTGATCATTT
TGAACCATCCAGGAGAAATTCACGCAGGATACCAACCTGTTCTTGATTGT
CATACGGCTCACGTCGCTTGCAAATTTGCCGTTCTCCAACAGAAAATCGA
TCGTCGTTCAGGAAAAGTTTTGGAAGAAAATCCAAAGATGGTGAAATCAG
GTGATGCAGCCATGATCGAGTTAGTTCCTTCGAAACCCATGGTCGTCGAA
TCTTTCAGTGATTATGCGCCCCTGGGTAGATTTGCCGTTCGTGACATGCG
ACAAACGGTGGCTGTCGGAGTTATCAAAGCCGTCATGAAGAAGGAGAAAG
CCGACGGAAAATCNCGAGTCGCTCACTGAAGCTGTCCCTGGTGATAATGT
GGGTTTCAACGTGAAAAATGTTTCAGTAAAAGAAATCAAACGGGGTATGG
TTGCTTCTGACAGCAAAAATGATCCAGCTAAGGGCGTCGAAAACTTCACT
GCTCAAGTAAGAAAATTCAATATTTCTTTTTTTTCCTAGGTCAATTTGAT
TGACATTCACTCGTTTGAAAGAAAAGTCAGATTTGGCTTTATTTTTAAGA
GCAATAACATCTTATCAATGCTGTTACTTGTTTATTGGACTTTGTTAAAC
GAGTGCCAACTCTGTCTCGCTTATAAATTGCATTACAACTTGCAAAATAA
TTCAATACGTTTACAGTGTCTTACAAGAGCTCACTCAAATATTGGTTGGA
ATTCAAAATTGTTCTCGTTTGTTCATTCATAGGTGATCATTTTGAACCAT
CCAGGAGAAATTCACGCAGGATACCAACCTGTTCTTGATTGTCATACGGC
TCACGTCGCTTGCAAATTTGCCGTTCTCCAACAGAAAATCGATCGTCGTT
CAGGAAAAGTTTTGGAAGAAAATCCAAAGATGGTGAAATCAGGTGATGCA
GCCATGATCGAGTTAGTTCCTTCGAAACCCATGGTCGTCGAATCTTTCAG
TGACTATGCACCCCTGGGTAGATTTGCCGTTCGTGACATGCGACAAACGG
TGGCTGTCGGAGTTATCAAAGCCGTCATGAAGAAGGAGAAAGCCGACGGA
AAATCCACCAAATCTGCCACGAAAGCCAGCAAAAAGAAATGATGTTTATT
TTCCAACAAACTACTTCATGTTGTTGTTGCATTCAATCAAAATGTTTATC
GAACAATCAAATTTCATAGAAAACATTTTCGTAGGATATCAGTGAATTTT
TGAAAAAAGAACGATTTTACGCTTGTTTTATTATTTCAAATTTCAAATTT
TGAGTGAATTTCCTGACTATTTACAGTGAATTCGTTGTCGAACTTTGTAC
TTTTCGTGGAATAGGCATTTTCTTAAATTGTACAGTACAGAAAAAAAAAC
AGTTTTGGCATAACCCATCAAGTCGATCAAGA

Coding sequence (CDS) from alignment at sc0000049:596728..613409-

>TCONS_00004923 ID=TCONS_00004923|Name=TCONS_00004923|organism=Clytia hemisphaerica|type=CDS|length=4176bp|location=Sequence derived from alignment at sc0000049:596728..613409- (Clytia hemisphaerica)
GTGATCATTTTGAACCATCCAGGAGAAATTCACGCAGGATACCAACCTGT
TCTTGATTGTCATACGGCTCACGTCGCTTGCAAATTTGCCGTTCTCCAAC
AGAAAATCGATCGTCGTTCAGGAAAAGTTTTGGAAGAAAATCCAAAGATG
GTGAAATCAGGTGATGCAGCCATGATCGAGTTAGTTCCTTCGAAACCCAT
GGTCGTCGAATCTTTCAGTGATTATGCGCCCCTGGGTAGATTTGCCGTTC
GTGACATGCGACAAACGGTGGCTGTCGGAGTTATCAAAGCCGTCATGAAG
AAGGAGAAAGCCGACGGAAAATCNCGAGTCGCTCACTGAGCGTGAAGCAG
TTGATTGTGGGCGTGAACAAGATCGACAACACTGAACCGCCCTACAGTGA
AACAAGATTCAAAGAAATCTCCAAAGAGATCGGTACCTACGTCAAGAAGG
TCGGTTACAACCCCAAAGCCGTTGCCATAGTTCCCATTTCTGGTTGGCAT
GGAGACAACATGATCGAATCCTCGACAAATATGTCTTGGTATAAAGGTTG
GACAACTGAAGGAACAACAGAAGAGAAGAAACCATTTAAAGAAAGTGGCA
AAACTTTATTGGAAGCTTTGGACGCCATTCAACCACCCAAACGCCCTGTT
TCCAAACCACTCCGTCTACCATTACAAGATGTTTACAAAATCGGAGGTAT
TGGCACCGTTCCCGTCGGTCGCGTTGAAACTGGCGTCATGAAGCCAGGAA
TGGTGGTGACTTTTGCACCTGCAGGCTTATCAACAGAAGTGAAATCGGTA
GAAATGCATCACGAGTCGCTCACTGAAGCTGTCCCTGGTGATAATGTGGG
TTTCAACGTGAAAAATGTTTCAGTAAAAGAAATCAAACGGGGTATGGTTG
CTTCTGACAGCAAAAATGATCCAGCTAAGGGCGTCGAAAACTTCACTGCT
CAAATGCCATTGGAAAAGAAGATCAAAACTCACTTGAGCATCGTGGTCAT
TGGACATGTCGATTCTGGAAAATCTACATCCACTGGTCATCTCATCTATA
AATGTGGAGGAATCGATAAAAGAGCTATCGAAAAGTTCGAAAAAGAAGCT
CAAGAAATGGGTAAAGGATCTTTCAAATATGCTTGGGTTTTGGATAAATT
GAAAGCAGAAAGAGAACGTGGTATCACCATCGATATTGCCCTCTGGAAAT
TTTTCTCCAACAAATATGAAATTACTATCATTGACGCTCCTGGACATCGA
GATTTCATCAAGAATATGATCACTGGTACATCACAAGCCGACTGTGCGGT
TCTTATCGTGGCTTCGTCTACCGGTGAATTTGAAGCTGGTATTTCTAAGA
ATGGACAAACCCGAGAACATGCCCTACTCGCCTACACTCTTGGTGATCAT
TTTGAACCATCCAGGAGAAATTCACGCAGGATACCAACCTGTTCTTGATT
GTCATACGGCTCACGTCGCTTGCAAATTTGCCGTTCTCCAACAGAAAATC
GATCGTCGTTCAGGAAAAGTTTTGGAAGAAAATCCAAAGATGGTGAAATC
AGGTGATGCAGCCATGATCGAGTTAGTTCCTTCGAAACCCATGGTCGTCG
AATCTTTCAGTGATTATGCGCCCCTGGGTAGATTTGCCGTTCGTGACATG
CGACAAACGGTGGCTGTCGGAGTTATCAAAGCCGTCATGAAGAAGGAGAA
AGCCGACGGAAAATCNCGAGTCGCTCACTGAGCGTGAAGCAGTTGATTGT
GGGCGTGAACAAGATCGACAACACTGAACCGCCCTACAGTGAAACAAGAT
TCAAAGAAATCTCCAAAGAGATCGGTACCTACGTCAAGAAGGTCGGTTAC
AACCCCAAAGCCGTTGCCATAGTTCCCATTTCTGGTTGGCATGGAGACAA
CATGATCGAATCCTCGACAAATATGTCTTGGTATAAAGGTTGGACAACTG
AAGGAACAACAGAAGAGAAGAAACCATTTAAAGAAAGTGGCAAAACTTTA
TTGGAAGCTTTGGACGCCATTCAACCACCCAAACGCCCTGTTTCCAAACC
ACTCCGTCTACCATTACAAGATGTTTACAAAATCGGAGGTATTGGCACCG
TTCCCGTCGGTCGCGTTGAAACTGGCGTCATGAAGCCAGGAATGGTGGTG
ACTTTTGCACCTGCAGGCTTATCAACAGAAGTGAAATCGGTAGAAATGCA
TCACGAGTCGCTCACTGAAGCTGTCCCTGGTGATAATGTGGGTTTCAACG
TGAAAAATGTTTCAGTAAAAGAAATCAAACGGGGTATGGTTGCTTCTGAC
AGCAAAAATGATCCAGCTAAGGGCGTCGAAAACTTCACTGCTCAAATGCC
ATTGGAAAAGAAGATCAAAACTCACTTGAGCATCGTGGTCATTGGACATG
TCGATTCTGGAAAATCTACATCCACTGGTCATCTCATCTATAAATGTGGA
GGAATCGATAAAAGAGCTATCGAAAAGTTCGAAAAAGAAGCTCAAGAAAT
GGGTAAAGGATCTTTCAAATATGCTTGGGTTTTGGATAAATTGAAAGCAG
AAAGAGAACGTGGTATCACCATCGATATTGCCCTCTGGAAATTTTTCTCC
AACAAATATGAAATTACTATCATTGACGCTCCTGGACATCGAGATTTCAT
CAAGAATATGATCACTGGTACATCACAAGCCGACTGTGCGGTTCTTATCG
TGGCTTCGTCTACCGGTGAATTTGAAGCTGGTATTTCTAAGAATGGACAA
ACCCGAGAACATGCCCTACTCGCCTACACTCTTGGTGATCATTTTGAACC
ATCCAGGAGAAATTCACGCAGGATACCAACCTGTTCTTGATTGTCATACG
GCTCACGTCGCTTGCAAATTTGCCGTTCTCCAACAGAAAATCGATCGTCG
TTCAGGAAAAGTTTTGGAAGAAAATCCAAAGATGGTGAAATCAGGTGATG
CAGCCATGATCGAGTTAGTTCCTTCGAAACCCATGGTCGTCGAATCTTTC
AGTGATTATGCGCCCCTGGGTAGATTTGCCGTTCGTGACATGCGACAAAC
GGTGGCTGTCGGAGTTATCAAAGCCGTCATGAAGAAGGAGAAAGCCGACG
GAAAATCNCGAGTCGCTCACTGAGCGTGAAGCAGTTGATTGTGGGCGTGA
ACAAGATCGACAACACTGAACCGCCCTACAGTGAAACAAGATTCAAAGAA
ATCTCCAAAGAGATCGGTACCTACGTCAAGAAGGTCGGTTACAACCCCAA
AGCCGTTGCCATAGTTCCCATTTCTGGTTGGCATGGAGACAACATGATCG
AATCCTCGACAAATATGTCTTGGTATAAAGGTTGGACAACTGAAGGAACA
ACAGAAGAGAAGAAACCATTTAAAGAAAGTGGCAAAACTTTATTGGAAGC
TTTGGACGCCATTCAACCACCCAAACGCCCTGTTTCCAAACCACTCCGTC
TACCATTACAAGATGTTTACAAAATCGGAGGTATTGGCACCGTTCCCGTC
GGTCGCGTTGAAACTGGCGTCATGAAGCCAGGAATGGTGGTGACTTTTGC
ACCTGCAGGCTTATCAACAGAAGTGAAATCGGTAGAAATGCATCACGAGT
CGCTCACTGAAGCTGTCCCTGGTGATAATGTGGGTTTCAACGTGAAAAAT
GTTTCAGTAAAAGAAATCAAACGGGGTATGGTTGCTTCTGACAGCAAAAA
TGATCCAGCTAAGGGCGTCGAAAACTTCACTGCTCAAATGCCATTGGAAA
AGAAGATCAAAACTCACTTGAGCATCGTGGTCATTGGACATGTCGATTCT
GGAAAATCTACATCCACTGGTCATCTCATCTATAAATGTGGAGGAATCGA
TAAAAGAGCTATCGAAAAGTTCGAAAAAGAAGCTCAAGAAATGGGTAAAG
GATCTTTCAAATATGCTTGGGTTTTGGATAAATTGAAAGCAGAAAGAGAA
CGTGGTATCACCATCGATATTGCCCTCTGGAAATTTTTCTCCAACAAATA
TGAAATTACTATCATTGACGCTCCTGGACATCGAGATTTCATCAAGAATA
TGATCACTGGTACATCACAAGCCGACTGTGCGGTTCTTATCGTGGCTTCG
TCTACCGGTGAATTTGAAGCTGGTATTTCTAAGAATGGACAAACCCGAGA
ACATGCCCTACTCGCCTACACTCTTG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_002786	XLOC_002786	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00004923-protein	TCONS_00004923-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000049	supercontig	sc0000049:596728..613409 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.480812	0.861799	0.90494	0.177575	0	0.0811304	0	0	0	0.166713	0	0	0	0	0	0	0	0	0	0	0	0	0.918291	0.670353	0	0.145902	0	0	0.26497	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000795	TF_GTP-bd_dom
IPR004539	Transl_elong_EF1A_euk/arc
IPR004160	Transl_elong_EFTu/EF1A_C
IPR004161	EFTu-like_2
IPR031157	G_TR_CS
IPR009000	Transl_B-barrel
IPR027417	P-loop_NTPase
IPR009001	Transl_elong_EF1A/Init_IF2_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding
GO:0003746	translation elongation factor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0006414	translational elongation

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003746	translation elongation factor activity

Blast

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BLAST of TCONS_00004923 vs. Swiss-Prot (Human)
Match: EF1A1 (Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF1A1 PE=1 SV=1)

HSP 1 Score: 732.25 bits (1889), Expect = 0.000e+0
Identity = 354/453 (78.15%), Postives = 394/453 (86.98%), Query Frame = 1

Query:  997 KIKTHLSIVVIGHVDSGKSTSTGHLIYKCGGIDKRAIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFFSNKYEITIIDAPGHRDFIKNMITGTSQADCAVLIVASSTGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKIDNTEPPYSETRFKEISKEIGTYVKKVGYNPKAVAIVPISGWHGDNMIESSTNMSWYXXXXXXXXXXXXXXXXXSGKTLLEALDAIQPPKRPVSKPLRLPLQDVYKIGGIGTVPVGRVETGVMKPGMVVTFAPAGLSTEVKSVEMHHESLTEAVPGDNVGFNVKNVSVKEIKRGMVASDSKNDPAKGVENFTAQVIILNHPGEIHAGYQPVLDCHTAHVACKFAVLQQKIDRRSGKVLEENPKMVKSGDAAMIELVPSKPMVVESFSDYAPLGRFAVRDMRQTVAVGVIKAVMKKEKADGK 2355
            K KTH++IVVIGHVDSGKST+TGHLIYKCGGIDKR IEKFEKEA EMGKGSFKYAWVLDKLKAERERGITIDI+LWKF ++KY +TIIDAPGHRDFIKNMITGTSQADCAVLIVA+  GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNK+D+TEPPYS+ R++EI KE+ TY+KK+GYNP  VA VPISGW+GDNM+E S NM W+     +G    +K    SG TLLEALD I PP RP  KPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTFAP  ++TEVKSVEMHHE+L+EA+PGDNVGFNVKNVSVK+++RG VA DSKNDP      FTAQVIILNHPG+I AGY PVLDCHTAH+ACKFA L++KIDRRSGK LE+ PK +KSGDAA++++VP KPM VESFSDY PLGRFAVRDMRQTVAVGVIKAV KK    GK
Sbjct:    3 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWF-----KGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGK 450

HSP 2 Score: 243.432 bits (620), Expect = 2.473e-70
Identity = 115/153 (75.16%), Postives = 131/153 (85.62%), Query Frame = 2

Query: 2360 ESLTEAVPGDNVGFNVKNVSVKEIKRGMVASDSKNDPAKGVENFTAQVIILNHPGEIHAGYQPVLDCHTAHVACKFAVLQQKIDRRSGKVLEENPKMVKSGDAAMIELVPSKPMVVESFSDYAPLGRFAVRDMRQTVAVGVIKAVMKKEKADG 2818
            E+L+EA+PGDNVGFNVKNVSVK+++RG VA DSKNDP      FTAQVIILNHPG+I AGY PVLDCHTAH+ACKFA L++KIDRRSGK LE+ PK +KSGDAA++++VP KPM VESFSDY PLGRFAVRDMRQTVAVGVIKAV KK    G
Sbjct:  297 EALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAG 449

The following BLAST results are available for this feature:

BLAST of TCONS_00004923 vs. Swiss-Prot (Human)

BLAST of TCONS_00004923 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
EF1A1	2.473e-70	78.15	Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF...	[more]

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TCONS_00004923 (transcript) - C. hemisphaerica